RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 CFAP74Q9C0B2 1584 aa27.28■■□□□ 1.96
LIMS2-211ENST00000426981 MYO5CQ9NQX4 1742 aa27.27■■□□□ 1.96
LIMS2-211ENST00000426981 SCAPERQ9BY12 1400 aa27.21■■□□□ 1.95
LIMS2-211ENST00000426981 EFCAB2Q5VUJ9 269 aa27.2■■□□□ 1.94
LIMS2-211ENST00000426981 CDC42BPBQ9Y5S2 1711 aa27.19■■□□□ 1.94
LIMS2-211ENST00000426981 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
LIMS2-211ENST00000426981 YEATS2Q9ULM3 1422 aa27.15■■□□□ 1.94
LIMS2-211ENST00000426981 POGZQ7Z3K3 1410 aa27.14■■□□□ 1.94
LIMS2-211ENST00000426981 ARHGEF40Q8TER5 1519 aa27.13■■□□□ 1.93
LIMS2-211ENST00000426981 ZMYM4Q5VZL5 1548 aa27.12■■□□□ 1.93
LIMS2-211ENST00000426981 CDC42BPAQ5VT25 1732 aa27.11■■□□□ 1.93
LIMS2-211ENST00000426981 PREX2Q70Z35 1606 aa27.11■■□□□ 1.93
LIMS2-211ENST00000426981 ARID4BQ4LE39 1312 aaPredicted RBP27.09■■□□□ 1.93
LIMS2-211ENST00000426981 SIGLEC1Q9BZZ2 1709 aa27.09■■□□□ 1.93
LIMS2-211ENST00000426981 AFAP1Q8N556 730 aa27.09■■□□□ 1.93
LIMS2-211ENST00000426981 ZFYVE16Q7Z3T8 1539 aa27.08■■□□□ 1.93
LIMS2-211ENST00000426981 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
LIMS2-211ENST00000426981 ADAMTSL3P82987 1691 aa27.05■■□□□ 1.92
LIMS2-211ENST00000426981 BCORL1Q5H9F3 1711 aa27.04■■□□□ 1.92
LIMS2-211ENST00000426981 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
LIMS2-211ENST00000426981 GPATCH8Q9UKJ3 1502 aaKnown RBP27.03■■□□□ 1.92
LIMS2-211ENST00000426981 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
LIMS2-211ENST00000426981 TRAPPC8Q9Y2L5 1435 aa27.02■■□□□ 1.92
LIMS2-211ENST00000426981 MAGI2Q86UL8 1455 aa27.02■■□□□ 1.92
LIMS2-211ENST00000426981 ABCC1P33527 1531 aa27■■□□□ 1.91
LIMS2-211ENST00000426981 ZNF518AQ6AHZ1 1483 aa26.99■■□□□ 1.91
LIMS2-211ENST00000426981 MADDQ8WXG6 1647 aa26.99■■□□□ 1.91
LIMS2-211ENST00000426981 KDM5CP41229 1560 aa26.98■■□□□ 1.91
LIMS2-211ENST00000426981 ITSN2Q9NZM3 1697 aa26.98■■□□□ 1.91
LIMS2-211ENST00000426981 SAMD9LQ8IVG5 1584 aa26.97■■□□□ 1.91
LIMS2-211ENST00000426981 MLECQ14165 292 aa26.96■■□□□ 1.91
LIMS2-211ENST00000426981 MYT1LQ9UL68 1186 aa26.95■■□□□ 1.9
LIMS2-211ENST00000426981 CCNB3Q8WWL7 1395 aa26.95■■□□□ 1.9
LIMS2-211ENST00000426981 VPS8Q8N3P4 1428 aa26.95■■□□□ 1.9
LIMS2-211ENST00000426981 ATP10AO60312 1499 aa26.95■■□□□ 1.9
LIMS2-211ENST00000426981 PELP1Q8IZL8 1130 aaKnown RBP26.94■■□□□ 1.9
LIMS2-211ENST00000426981 PTPRMP28827 1452 aa26.94■■□□□ 1.9
LIMS2-211ENST00000426981 EHBP1L1Q8N3D4 1523 aa26.94■■□□□ 1.9
LIMS2-211ENST00000426981 HNRNPMP52272 730 aaKnown RBP eCLIP26.92■■□□□ 1.9
LIMS2-211ENST00000426981 TIAM1Q13009 1591 aa26.92■■□□□ 1.9
LIMS2-211ENST00000426981 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
LIMS2-211ENST00000426981 CFDP1Q9UEE9 299 aaPredicted RBP26.91■■□□□ 1.9
LIMS2-211ENST00000426981 SYCP2Q9BX26 1530 aa26.9■■□□□ 1.9
LIMS2-211ENST00000426981 C9orf84Q5VXU9 1444 aa26.9■■□□□ 1.9
LIMS2-211ENST00000426981 RIMS1Q86UR5 1692 aaKnown RBP26.9■■□□□ 1.9
LIMS2-211ENST00000426981 ZNF644Q9H582 1327 aaPredicted RBP26.89■■□□□ 1.89
LIMS2-211ENST00000426981 DIP2CQ9Y2E4 1556 aa26.89■■□□□ 1.89
LIMS2-211ENST00000426981 ABCA6Q8N139 1617 aa26.88■■□□□ 1.89
LIMS2-211ENST00000426981 PLPPR3Q6T4P5 718 aa26.87■■□□□ 1.89
LIMS2-211ENST00000426981 MLH3Q9UHC1 1453 aa26.87■■□□□ 1.89
LIMS2-211ENST00000426981 KIDINS220Q9ULH0 1771 aa26.85■■□□□ 1.89
LIMS2-211ENST00000426981 NCOA2Q15596 1464 aa26.83■■□□□ 1.89
LIMS2-211ENST00000426981 KANK4Q5T7N3 995 aaPredicted RBP26.82■■□□□ 1.88
LIMS2-211ENST00000426981 SUPT6HQ7KZ85 1726 aaKnown RBP26.8■■□□□ 1.88
LIMS2-211ENST00000426981 LRRC9Q6ZRR7 1453 aa26.79■■□□□ 1.88
LIMS2-211ENST00000426981 FER1L4A9Z1Z3 1794 aa26.79■■□□□ 1.88
LIMS2-211ENST00000426981 KIAA1107Q9UPP5 1409 aa26.79■■□□□ 1.88
LIMS2-211ENST00000426981 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
LIMS2-211ENST00000426981 PLEKHH2Q8IVE3 1493 aa26.76■■□□□ 1.87
LIMS2-211ENST00000426981 REREQ9P2R6 1566 aa26.75■■□□□ 1.87
LIMS2-211ENST00000426981 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
LIMS2-211ENST00000426981 CEBPAP49715 358 aaPredicted RBP26.71■■□□□ 1.87
LIMS2-211ENST00000426981 ATP7AQ04656 1500 aa26.71■■□□□ 1.87
LIMS2-211ENST00000426981 MAP3K1Q13233 1512 aa26.7■■□□□ 1.86
LIMS2-211ENST00000426981 INO80Q9ULG1 1556 aaPredicted RBP26.7■■□□□ 1.86
LIMS2-211ENST00000426981 AGLP35573 1532 aa26.68■■□□□ 1.86
LIMS2-211ENST00000426981 CAMSAP2Q08AD1 1489 aa26.68■■□□□ 1.86
LIMS2-211ENST00000426981 LMTK3Q96Q04 1460 aa26.64■■□□□ 1.85
LIMS2-211ENST00000426981 A2MP01023 1474 aa26.61■■□□□ 1.85
LIMS2-211ENST00000426981 HSPA2P54652 639 aa26.6■■□□□ 1.85
LIMS2-211ENST00000426981 PLXNC1O60486 1568 aa26.58■■□□□ 1.85
LIMS2-211ENST00000426981 CCDC141Q6ZP82 1450 aa26.57■■□□□ 1.84
LIMS2-211ENST00000426981 APLP2Q06481 763 aa26.57■■□□□ 1.84
LIMS2-211ENST00000426981 C3P01024 1663 aa26.55■■□□□ 1.84
LIMS2-211ENST00000426981 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
LIMS2-211ENST00000426981 MYOM3Q5VTT5 1437 aa26.55■■□□□ 1.84
LIMS2-211ENST00000426981 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
LIMS2-211ENST00000426981 GGT6Q6P531 493 aa26.52■■□□□ 1.84
LIMS2-211ENST00000426981 ESF1Q9H501 851 aaKnown RBP26.52■■□□□ 1.84
LIMS2-211ENST00000426981 ARHGEF5Q12774 1597 aa26.52■■□□□ 1.84
LIMS2-211ENST00000426981 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
LIMS2-211ENST00000426981 DHX29Q7Z478 1369 aaKnown RBP26.47■■□□□ 1.83
LIMS2-211ENST00000426981 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
LIMS2-211ENST00000426981 CLTCQ00610 1675 aaKnown RBP26.46■■□□□ 1.83
LIMS2-211ENST00000426981 TSPY4P0CV99 314 aa26.46■■□□□ 1.83
LIMS2-211ENST00000426981 TSPY10P0CW01 314 aa26.46■■□□□ 1.83
LIMS2-211ENST00000426981 PREX1Q8TCU6 1659 aa26.45■■□□□ 1.83
LIMS2-211ENST00000426981 CNTLNQ9NXG0 1405 aa26.44■■□□□ 1.82
LIMS2-211ENST00000426981 ZMYM3Q14202 1370 aa26.43■■□□□ 1.82
LIMS2-211ENST00000426981 KIF3BO15066 747 aa26.42■■□□□ 1.82
LIMS2-211ENST00000426981 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
LIMS2-211ENST00000426981 PTPN23Q9H3S7 1636 aa26.41■■□□□ 1.82
LIMS2-211ENST00000426981 SETD1BQ9UPS6 1966 aaKnown RBP26.41■■□□□ 1.82
LIMS2-211ENST00000426981 MROH2AA6NES4 1674 aa26.4■■□□□ 1.82
LIMS2-211ENST00000426981 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
LIMS2-211ENST00000426981 UHRF1BP1Q6BDS2 1440 aa26.38■■□□□ 1.81
LIMS2-211ENST00000426981 FGD6Q6ZV73 1430 aa26.38■■□□□ 1.81
LIMS2-211ENST00000426981 ABCC5O15440 1437 aa26.35■■□□□ 1.81
LIMS2-211ENST00000426981 TCOF1Q13428 1488 aaKnown RBP26.32■■□□□ 1.8
LIMS2-211ENST00000426981 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms