RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
R3HDM1-205ENST00000425804 HCSTQ9UBK5 93 aa10.12□□□□□ -0.79
R3HDM1-205ENST00000425804 PBX2P40425 430 aa10.08□□□□□ -0.8
R3HDM1-205ENST00000425804 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
R3HDM1-205ENST00000425804 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
R3HDM1-205ENST00000425804 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
R3HDM1-205ENST00000425804 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
R3HDM1-205ENST00000425804 SOX12O15370 315 aa10.03□□□□□ -0.8
R3HDM1-205ENST00000425804 NUDT7P0C024 238 aa10.01□□□□□ -0.81
R3HDM1-205ENST00000425804 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
R3HDM1-205ENST00000425804 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
R3HDM1-205ENST00000425804 ADGRD1Q6QNK2 874 aa9.98□□□□□ -0.81
R3HDM1-205ENST00000425804 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
R3HDM1-205ENST00000425804 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
R3HDM1-205ENST00000425804 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
R3HDM1-205ENST00000425804 PCDHGA4Q9Y5G9 962 aa9.91□□□□□ -0.82
R3HDM1-205ENST00000425804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
R3HDM1-205ENST00000425804 KIF3CO14782 793 aa9.9□□□□□ -0.82
R3HDM1-205ENST00000425804 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
R3HDM1-205ENST00000425804 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
R3HDM1-205ENST00000425804 HRO43593 1189 aa9.88□□□□□ -0.83
R3HDM1-205ENST00000425804 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
R3HDM1-205ENST00000425804 IRX2Q9BZI1 471 aaPredicted RBP9.88□□□□□ -0.83
R3HDM1-205ENST00000425804 TK2O00142 265 aa9.86□□□□□ -0.83
R3HDM1-205ENST00000425804 RIOK3O14730 519 aaKnown RBP9.86□□□□□ -0.83
R3HDM1-205ENST00000425804 SLC34A2O95436 690 aa9.86□□□□□ -0.83
R3HDM1-205ENST00000425804 RGS20O76081 388 aa9.85□□□□□ -0.83
R3HDM1-205ENST00000425804 NLRP6P59044 892 aa9.85□□□□□ -0.83
R3HDM1-205ENST00000425804 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
R3HDM1-205ENST00000425804 FBXO22Q8NEZ5 403 aa9.84□□□□□ -0.83
R3HDM1-205ENST00000425804 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
R3HDM1-205ENST00000425804 VGFO15240 615 aaPredicted RBP9.82□□□□□ -0.84
R3HDM1-205ENST00000425804 PSEN2P49810 448 aa9.82□□□□□ -0.84
R3HDM1-205ENST00000425804 PSDA5PKW4 1024 aaPredicted RBP9.81□□□□□ -0.84
R3HDM1-205ENST00000425804 STAC3Q96MF2 364 aa9.78□□□□□ -0.84
R3HDM1-205ENST00000425804 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
R3HDM1-205ENST00000425804 PTPN5P54829 565 aa9.76□□□□□ -0.85
R3HDM1-205ENST00000425804 A0A0G2JS52 829 aa9.74□□□□□ -0.85
R3HDM1-205ENST00000425804 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
R3HDM1-205ENST00000425804 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
R3HDM1-205ENST00000425804 TMC2Q8TDI7 906 aa9.73□□□□□ -0.85
R3HDM1-205ENST00000425804 BCL11BQ9C0K0 894 aaPredicted RBP9.71□□□□□ -0.86
R3HDM1-205ENST00000425804 PPP4R3BQ5MIZ7 849 aa9.69□□□□□ -0.86
R3HDM1-205ENST00000425804 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
R3HDM1-205ENST00000425804 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
R3HDM1-205ENST00000425804 VPS9D1Q9Y2B5 631 aa9.66□□□□□ -0.86
R3HDM1-205ENST00000425804 STK24Q9Y6E0 443 aa9.66□□□□□ -0.86
R3HDM1-205ENST00000425804 Q6ZNB5 142 aa9.65□□□□□ -0.86
R3HDM1-205ENST00000425804 THSD4Q6ZMP0 1018 aa9.64□□□□□ -0.87
R3HDM1-205ENST00000425804 KCNH8Q96L42 1107 aa9.63□□□□□ -0.87
R3HDM1-205ENST00000425804 TAOK2Q9UL54 1235 aa9.59□□□□□ -0.87
R3HDM1-205ENST00000425804 WNT2BQ93097 391 aa9.57□□□□□ -0.88
R3HDM1-205ENST00000425804 BHMG1C9JSJ3 638 aaPredicted RBP9.56□□□□□ -0.88
R3HDM1-205ENST00000425804 STK25O00506 426 aa9.56□□□□□ -0.88
R3HDM1-205ENST00000425804 GOLGA8CPA6NN73 597 aa9.55□□□□□ -0.88
R3HDM1-205ENST00000425804 SLC4A5Q9BY07 1137 aa9.55□□□□□ -0.88
R3HDM1-205ENST00000425804 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
R3HDM1-205ENST00000425804 TBC1D12O60347 775 aa9.53□□□□□ -0.88
R3HDM1-205ENST00000425804 FOXK1P85037 733 aa9.53□□□□□ -0.88
R3HDM1-205ENST00000425804 PPP1R37O75864 691 aa9.52□□□□□ -0.89
R3HDM1-205ENST00000425804 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
R3HDM1-205ENST00000425804 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
R3HDM1-205ENST00000425804 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
R3HDM1-205ENST00000425804 LCE2BO14633 110 aa9.48□□□□□ -0.89
R3HDM1-205ENST00000425804 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
R3HDM1-205ENST00000425804 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
R3HDM1-205ENST00000425804 DSG2Q14126 1118 aa9.46□□□□□ -0.9
R3HDM1-205ENST00000425804 PTPREP23469 700 aa9.45□□□□□ -0.9
R3HDM1-205ENST00000425804 GPHNQ9NQX3 736 aaPredicted RBP9.45□□□□□ -0.9
R3HDM1-205ENST00000425804 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
R3HDM1-205ENST00000425804 LAPTM4AQ15012 233 aa9.42□□□□□ -0.9
R3HDM1-205ENST00000425804 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
R3HDM1-205ENST00000425804 FOSBP53539 338 aa9.4□□□□□ -0.9
R3HDM1-205ENST00000425804 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
R3HDM1-205ENST00000425804 UPF1Q92900 1129 aaKnown RBP eCLIP9.39□□□□□ -0.91
R3HDM1-205ENST00000425804 GFRA3O60609 400 aa9.37□□□□□ -0.91
R3HDM1-205ENST00000425804 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
R3HDM1-205ENST00000425804 BCAMP50895 628 aa9.36□□□□□ -0.91
R3HDM1-205ENST00000425804 KCNC4Q03721 635 aa9.34□□□□□ -0.91
R3HDM1-205ENST00000425804 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
R3HDM1-205ENST00000425804 JPH4Q96JJ6 628 aa9.33□□□□□ -0.92
R3HDM1-205ENST00000425804 ZDHHC16Q969W1 377 aa9.32□□□□□ -0.92
R3HDM1-205ENST00000425804 ECM2O94769 699 aaPredicted RBP9.31□□□□□ -0.92
R3HDM1-205ENST00000425804 NYAP1Q6ZVC0 841 aa9.31□□□□□ -0.92
R3HDM1-205ENST00000425804 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
R3HDM1-205ENST00000425804 RABGEF1Q9UJ41 708 aa9.3□□□□□ -0.92
R3HDM1-205ENST00000425804 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
R3HDM1-205ENST00000425804 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
R3HDM1-205ENST00000425804 RGL2O15211 777 aa9.28□□□□□ -0.92
R3HDM1-205ENST00000425804 ANO8Q9HCE9 1232 aaPredicted RBP9.28□□□□□ -0.92
R3HDM1-205ENST00000425804 PPP1R3GB7ZBB8 358 aa9.26□□□□□ -0.93
R3HDM1-205ENST00000425804 NRG2O14511 850 aaPredicted RBP9.26□□□□□ -0.93
R3HDM1-205ENST00000425804 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
R3HDM1-205ENST00000425804 EVI5O60447 810 aa9.24□□□□□ -0.93
R3HDM1-205ENST00000425804 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
R3HDM1-205ENST00000425804 ZFRQ96KR1 1074 aaKnown RBP9.24□□□□□ -0.93
R3HDM1-205ENST00000425804 ZNF775Q96BV0 537 aaPredicted RBP9.23□□□□□ -0.93
R3HDM1-205ENST00000425804 COL9A1P20849 921 aa9.22□□□□□ -0.93
R3HDM1-205ENST00000425804 PPP1R15BQ5SWA1 713 aa9.22□□□□□ -0.93
R3HDM1-205ENST00000425804 PRKD2Q9BZL6 878 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms