RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 POGZQ7Z3K3 1410 aa29.45■■■□□ 2.31
MSH5-207ENST00000425703 ZMYM4Q5VZL5 1548 aa29.45■■■□□ 2.31
MSH5-207ENST00000425703 MTUS2Q5JR59 1369 aa29.44■■■□□ 2.3
MSH5-207ENST00000425703 MAGI2Q86UL8 1455 aa29.43■■■□□ 2.3
MSH5-207ENST00000425703 VPS8Q8N3P4 1428 aa29.42■■■□□ 2.3
MSH5-207ENST00000425703 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
MSH5-207ENST00000425703 ARHGEF40Q8TER5 1519 aa29.39■■■□□ 2.3
MSH5-207ENST00000425703 CDC42BPBQ9Y5S2 1711 aa29.38■■■□□ 2.29
MSH5-207ENST00000425703 ZNF518AQ6AHZ1 1483 aa29.36■■■□□ 2.29
MSH5-207ENST00000425703 EHBP1L1Q8N3D4 1523 aa29.36■■■□□ 2.29
MSH5-207ENST00000425703 GPATCH8Q9UKJ3 1502 aaKnown RBP29.35■■■□□ 2.29
MSH5-207ENST00000425703 ZFYVE16Q7Z3T8 1539 aa29.34■■■□□ 2.29
MSH5-207ENST00000425703 CDC42BPAQ5VT25 1732 aa29.33■■■□□ 2.29
MSH5-207ENST00000425703 CCNB3Q8WWL7 1395 aa29.32■■■□□ 2.28
MSH5-207ENST00000425703 YEATS2Q9ULM3 1422 aa29.3■■■□□ 2.28
MSH5-207ENST00000425703 ABCC1P33527 1531 aa29.3■■■□□ 2.28
MSH5-207ENST00000425703 KDM5CP41229 1560 aa29.29■■■□□ 2.28
MSH5-207ENST00000425703 AFAP1Q8N556 730 aa29.28■■■□□ 2.28
MSH5-207ENST00000425703 TIAM1Q13009 1591 aa29.27■■■□□ 2.28
MSH5-207ENST00000425703 CFDP1Q9UEE9 299 aaPredicted RBP29.27■■■□□ 2.28
MSH5-207ENST00000425703 ARHGEF12Q9NZN5 1544 aa29.25■■■□□ 2.27
MSH5-207ENST00000425703 ARID4BQ4LE39 1312 aaPredicted RBP29.25■■■□□ 2.27
MSH5-207ENST00000425703 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
MSH5-207ENST00000425703 KIAA1107Q9UPP5 1409 aa29.23■■■□□ 2.27
MSH5-207ENST00000425703 ATP10AO60312 1499 aa29.23■■■□□ 2.27
MSH5-207ENST00000425703 PLEKHH2Q8IVE3 1493 aa29.23■■■□□ 2.27
MSH5-207ENST00000425703 MLH3Q9UHC1 1453 aa29.23■■■□□ 2.27
MSH5-207ENST00000425703 TRAPPC8Q9Y2L5 1435 aa29.22■■■□□ 2.27
MSH5-207ENST00000425703 ZNF777Q9ULD5 760 aaPredicted RBP29.22■■■□□ 2.27
MSH5-207ENST00000425703 SAMD9LQ8IVG5 1584 aa29.21■■■□□ 2.27
MSH5-207ENST00000425703 ITSN2Q9NZM3 1697 aa29.2■■■□□ 2.26
MSH5-207ENST00000425703 ADAMTSL3P82987 1691 aa29.19■■■□□ 2.26
MSH5-207ENST00000425703 C9orf84Q5VXU9 1444 aa29.19■■■□□ 2.26
MSH5-207ENST00000425703 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
MSH5-207ENST00000425703 NCOA2Q15596 1464 aa29.18■■■□□ 2.26
MSH5-207ENST00000425703 LRRC9Q6ZRR7 1453 aa29.18■■■□□ 2.26
MSH5-207ENST00000425703 BCORL1Q5H9F3 1711 aa29.18■■■□□ 2.26
MSH5-207ENST00000425703 SUPT6HQ7KZ85 1726 aaKnown RBP29.16■■■□□ 2.26
MSH5-207ENST00000425703 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
MSH5-207ENST00000425703 HNRNPMP52272 730 aaKnown RBP eCLIP29.12■■■□□ 2.25
MSH5-207ENST00000425703 MYT1LQ9UL68 1186 aa29.12■■■□□ 2.25
MSH5-207ENST00000425703 REREQ9P2R6 1566 aa29.1■■■□□ 2.25
MSH5-207ENST00000425703 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
MSH5-207ENST00000425703 PTPRMP28827 1452 aa29.09■■■□□ 2.25
MSH5-207ENST00000425703 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
MSH5-207ENST00000425703 SPAG9O60271 1321 aaKnown RBP29.07■■■□□ 2.24
MSH5-207ENST00000425703 KANK4Q5T7N3 995 aaPredicted RBP29.07■■■□□ 2.24
MSH5-207ENST00000425703 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
MSH5-207ENST00000425703 APLP2Q06481 763 aa29.06■■■□□ 2.24
MSH5-207ENST00000425703 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
MSH5-207ENST00000425703 ABCA6Q8N139 1617 aa29.05■■■□□ 2.24
MSH5-207ENST00000425703 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
MSH5-207ENST00000425703 KIDINS220Q9ULH0 1771 aa29.04■■■□□ 2.24
MSH5-207ENST00000425703 AGLP35573 1532 aa29.01■■■□□ 2.23
MSH5-207ENST00000425703 RSPH4AQ5TD94 716 aa29■■■□□ 2.23
MSH5-207ENST00000425703 MLECQ14165 292 aa28.99■■■□□ 2.23
MSH5-207ENST00000425703 ATP7AQ04656 1500 aa28.98■■■□□ 2.23
MSH5-207ENST00000425703 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
MSH5-207ENST00000425703 INO80Q9ULG1 1556 aaPredicted RBP28.96■■■□□ 2.23
MSH5-207ENST00000425703 RTEL1-TNFRSF6BF6WH68 1400 aa28.95■■■□□ 2.23
MSH5-207ENST00000425703 MIA2Q96PC5 1412 aa28.94■■■□□ 2.22
MSH5-207ENST00000425703 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
MSH5-207ENST00000425703 RIMS1Q86UR5 1692 aaKnown RBP28.93■■■□□ 2.22
MSH5-207ENST00000425703 CCDC141Q6ZP82 1450 aa28.92■■■□□ 2.22
MSH5-207ENST00000425703 FER1L4A9Z1Z3 1794 aa28.89■■■□□ 2.22
MSH5-207ENST00000425703 ARHGEF5Q12774 1597 aa28.88■■■□□ 2.21
MSH5-207ENST00000425703 A2MP01023 1474 aa28.87■■■□□ 2.21
MSH5-207ENST00000425703 PLXNC1O60486 1568 aa28.86■■■□□ 2.21
MSH5-207ENST00000425703 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
MSH5-207ENST00000425703 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
MSH5-207ENST00000425703 ADGBQ8N7X0 1667 aa28.81■■■□□ 2.2
MSH5-207ENST00000425703 CNTLNQ9NXG0 1405 aa28.79■■■□□ 2.2
MSH5-207ENST00000425703 DHX29Q7Z478 1369 aaKnown RBP28.79■■■□□ 2.2
MSH5-207ENST00000425703 ESF1Q9H501 851 aaKnown RBP28.79■■■□□ 2.2
MSH5-207ENST00000425703 PPP6R1Q9UPN7 881 aa28.75■■■□□ 2.19
MSH5-207ENST00000425703 FGD6Q6ZV73 1430 aa28.74■■■□□ 2.19
MSH5-207ENST00000425703 LMTK3Q96Q04 1460 aa28.73■■■□□ 2.19
MSH5-207ENST00000425703 PLPPR3Q6T4P5 718 aa28.73■■■□□ 2.19
MSH5-207ENST00000425703 MAST1Q9Y2H9 1570 aa28.73■■■□□ 2.19
MSH5-207ENST00000425703 CEBPAP49715 358 aaPredicted RBP28.71■■■□□ 2.19
MSH5-207ENST00000425703 TCOF1Q13428 1488 aaKnown RBP28.7■■■□□ 2.18
MSH5-207ENST00000425703 PTPN23Q9H3S7 1636 aa28.69■■■□□ 2.18
MSH5-207ENST00000425703 GGT6Q6P531 493 aa28.67■■■□□ 2.18
MSH5-207ENST00000425703 SHANK2Q9UPX8 1470 aa28.65■■■□□ 2.18
MSH5-207ENST00000425703 ABCC5O15440 1437 aa28.64■■■□□ 2.18
MSH5-207ENST00000425703 MROH2AA6NES4 1674 aa28.64■■■□□ 2.17
MSH5-207ENST00000425703 ZMYM3Q14202 1370 aa28.63■■■□□ 2.17
MSH5-207ENST00000425703 KIF3BO15066 747 aa28.63■■■□□ 2.17
MSH5-207ENST00000425703 C3P01024 1663 aa28.63■■■□□ 2.17
MSH5-207ENST00000425703 FAM135AQ9P2D6 1515 aa28.6■■■□□ 2.17
MSH5-207ENST00000425703 DAPK1P53355 1430 aa28.6■■■□□ 2.17
MSH5-207ENST00000425703 NPATQ14207 1427 aa28.6■■■□□ 2.17
MSH5-207ENST00000425703 SETD1BQ9UPS6 1966 aaKnown RBP28.59■■■□□ 2.17
MSH5-207ENST00000425703 PREX1Q8TCU6 1659 aa28.58■■■□□ 2.17
MSH5-207ENST00000425703 DNMT1P26358 1616 aaKnown RBP28.58■■■□□ 2.17
MSH5-207ENST00000425703 UHRF1BP1Q6BDS2 1440 aa28.57■■■□□ 2.16
MSH5-207ENST00000425703 CROCC2H7BZ55 1655 aa28.54■■■□□ 2.16
MSH5-207ENST00000425703 DUOX2Q9NRD8 1548 aa28.54■■■□□ 2.16
MSH5-207ENST00000425703 HSPA2P54652 639 aa28.54■■■□□ 2.16
MSH5-207ENST00000425703 CLTCQ00610 1675 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms