RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 POGZQ7Z3K3 1410 aa34.71■■■■□ 3.15
CDCP1-202ENST00000425231 ARHGAP5Q13017 1502 aa34.7■■■■□ 3.15
CDCP1-202ENST00000425231 MAGI2Q86UL8 1455 aa34.68■■■■□ 3.14
CDCP1-202ENST00000425231 CDC42BPBQ9Y5S2 1711 aa34.68■■■■□ 3.14
CDCP1-202ENST00000425231 YEATS2Q9ULM3 1422 aa34.66■■■■□ 3.14
CDCP1-202ENST00000425231 ADAMTSL3P82987 1691 aa34.66■■■■□ 3.14
CDCP1-202ENST00000425231 ZFYVE16Q7Z3T8 1539 aa34.65■■■■□ 3.14
CDCP1-202ENST00000425231 ARID4BQ4LE39 1312 aaPredicted RBP34.64■■■■□ 3.14
CDCP1-202ENST00000425231 LOC105371045A0A1W2PR82 267 aa34.64■■■■□ 3.14
CDCP1-202ENST00000425231 PREX2Q70Z35 1606 aa34.63■■■■□ 3.13
CDCP1-202ENST00000425231 BCORL1Q5H9F3 1711 aa34.62■■■■□ 3.13
CDCP1-202ENST00000425231 CDC42BPAQ5VT25 1732 aa34.57■■■■□ 3.13
CDCP1-202ENST00000425231 ZNF518AQ6AHZ1 1483 aa34.57■■■■□ 3.12
CDCP1-202ENST00000425231 AFAP1Q8N556 730 aa34.56■■■■□ 3.12
CDCP1-202ENST00000425231 SIGLEC1Q9BZZ2 1709 aa34.55■■■■□ 3.12
CDCP1-202ENST00000425231 KDM5CP41229 1560 aa34.53■■■■□ 3.12
CDCP1-202ENST00000425231 PTPRMP28827 1452 aa34.53■■■■□ 3.12
CDCP1-202ENST00000425231 ARHGEF12Q9NZN5 1544 aa34.51■■■■□ 3.11
CDCP1-202ENST00000425231 ABCC1P33527 1531 aa34.5■■■■□ 3.11
CDCP1-202ENST00000425231 GPATCH8Q9UKJ3 1502 aaKnown RBP34.5■■■■□ 3.11
CDCP1-202ENST00000425231 MTUS2Q5JR59 1369 aa34.5■■■■□ 3.11
CDCP1-202ENST00000425231 MADDQ8WXG6 1647 aa34.5■■■■□ 3.11
CDCP1-202ENST00000425231 ATP10AO60312 1499 aa34.49■■■■□ 3.11
CDCP1-202ENST00000425231 TRAPPC8Q9Y2L5 1435 aa34.46■■■■□ 3.11
CDCP1-202ENST00000425231 HECW2Q9P2P5 1572 aa34.46■■■■□ 3.11
CDCP1-202ENST00000425231 ITSN2Q9NZM3 1697 aa34.43■■■■□ 3.1
CDCP1-202ENST00000425231 C9orf84Q5VXU9 1444 aa34.43■■■■□ 3.1
CDCP1-202ENST00000425231 MLH3Q9UHC1 1453 aa34.42■■■■□ 3.1
CDCP1-202ENST00000425231 ZNF777Q9ULD5 760 aaPredicted RBP34.41■■■■□ 3.1
CDCP1-202ENST00000425231 SAMD9LQ8IVG5 1584 aa34.4■■■■□ 3.1
CDCP1-202ENST00000425231 CCNB3Q8WWL7 1395 aa34.4■■■■□ 3.1
CDCP1-202ENST00000425231 EHBP1L1Q8N3D4 1523 aa34.38■■■■□ 3.09
CDCP1-202ENST00000425231 RIMS1Q86UR5 1692 aaKnown RBP34.37■■■■□ 3.09
CDCP1-202ENST00000425231 CFDP1Q9UEE9 299 aaPredicted RBP34.37■■■■□ 3.09
CDCP1-202ENST00000425231 MYT1LQ9UL68 1186 aa34.37■■■■□ 3.09
CDCP1-202ENST00000425231 DIP2CQ9Y2E4 1556 aa34.36■■■■□ 3.09
CDCP1-202ENST00000425231 MLECQ14165 292 aa34.36■■■■□ 3.09
CDCP1-202ENST00000425231 VPS8Q8N3P4 1428 aa34.34■■■■□ 3.09
CDCP1-202ENST00000425231 ABCA6Q8N139 1617 aa34.32■■■■□ 3.08
CDCP1-202ENST00000425231 SYCP2Q9BX26 1530 aa34.32■■■■□ 3.08
CDCP1-202ENST00000425231 HNRNPMP52272 730 aaKnown RBP eCLIP34.31■■■■□ 3.08
CDCP1-202ENST00000425231 KIAA1107Q9UPP5 1409 aa34.3■■■■□ 3.08
CDCP1-202ENST00000425231 TIAM1Q13009 1591 aa34.3■■■■□ 3.08
CDCP1-202ENST00000425231 REREQ9P2R6 1566 aa34.3■■■■□ 3.08
CDCP1-202ENST00000425231 KIDINS220Q9ULH0 1771 aa34.29■■■■□ 3.08
CDCP1-202ENST00000425231 PLEKHH2Q8IVE3 1493 aa34.27■■■■□ 3.08
CDCP1-202ENST00000425231 FER1L4A9Z1Z3 1794 aa34.26■■■■□ 3.07
CDCP1-202ENST00000425231 ZNF644Q9H582 1327 aaPredicted RBP34.22■■■■□ 3.07
CDCP1-202ENST00000425231 SPAG9O60271 1321 aaKnown RBP34.21■■■■□ 3.07
CDCP1-202ENST00000425231 NCOA2Q15596 1464 aa34.2■■■■□ 3.07
CDCP1-202ENST00000425231 SUPT6HQ7KZ85 1726 aaKnown RBP34.2■■■■□ 3.06
CDCP1-202ENST00000425231 AGLP35573 1532 aa34.19■■■■□ 3.06
CDCP1-202ENST00000425231 PLPPR3Q6T4P5 718 aa34.17■■■■□ 3.06
CDCP1-202ENST00000425231 LRRC9Q6ZRR7 1453 aa34.15■■■■□ 3.06
CDCP1-202ENST00000425231 LMTK3Q96Q04 1460 aa34.15■■■■□ 3.06
CDCP1-202ENST00000425231 MBD5Q9P267 1494 aa34.15■■■■□ 3.06
CDCP1-202ENST00000425231 ATP7AQ04656 1500 aa34.13■■■■□ 3.05
CDCP1-202ENST00000425231 MAP3K1Q13233 1512 aa34.13■■■■□ 3.05
CDCP1-202ENST00000425231 INO80Q9ULG1 1556 aaPredicted RBP34.12■■■■□ 3.05
CDCP1-202ENST00000425231 KANK4Q5T7N3 995 aaPredicted RBP34.09■■■■□ 3.05
CDCP1-202ENST00000425231 CEBPAP49715 358 aaPredicted RBP34.07■■■■□ 3.04
CDCP1-202ENST00000425231 CAMSAP2Q08AD1 1489 aa34.02■■■■□ 3.04
CDCP1-202ENST00000425231 A2MP01023 1474 aa34.01■■■■□ 3.03
CDCP1-202ENST00000425231 PLXNC1O60486 1568 aa34■■■■□ 3.03
CDCP1-202ENST00000425231 RTEL1-TNFRSF6BF6WH68 1400 aa33.99■■■■□ 3.03
CDCP1-202ENST00000425231 HSPA2P54652 639 aa33.96■■■■□ 3.03
CDCP1-202ENST00000425231 RSPH4AQ5TD94 716 aa33.96■■■■□ 3.03
CDCP1-202ENST00000425231 ESF1Q9H501 851 aaKnown RBP33.96■■■■□ 3.03
CDCP1-202ENST00000425231 CCDC141Q6ZP82 1450 aa33.95■■■■□ 3.03
CDCP1-202ENST00000425231 ADGBQ8N7X0 1667 aa33.94■■■■□ 3.02
CDCP1-202ENST00000425231 C3P01024 1663 aa33.94■■■■□ 3.02
CDCP1-202ENST00000425231 CNTLNQ9NXG0 1405 aa33.92■■■■□ 3.02
CDCP1-202ENST00000425231 PREX1Q8TCU6 1659 aa33.9■■■■□ 3.02
CDCP1-202ENST00000425231 SETD1BQ9UPS6 1966 aaKnown RBP33.89■■■■□ 3.02
CDCP1-202ENST00000425231 ARHGEF5Q12774 1597 aa33.89■■■■□ 3.02
CDCP1-202ENST00000425231 APLP2Q06481 763 aa33.87■■■■□ 3.01
CDCP1-202ENST00000425231 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
CDCP1-202ENST00000425231 DHX29Q7Z478 1369 aaKnown RBP33.86■■■■□ 3.01
CDCP1-202ENST00000425231 MIA2Q96PC5 1412 aa33.86■■■■□ 3.01
CDCP1-202ENST00000425231 GGT6Q6P531 493 aa33.84■■■■□ 3.01
CDCP1-202ENST00000425231 MROH2AA6NES4 1674 aa33.83■■■■□ 3.01
CDCP1-202ENST00000425231 ZMYM3Q14202 1370 aa33.82■■■■□ 3
CDCP1-202ENST00000425231 TSPY4P0CV99 314 aa33.81■■■■□ 3
CDCP1-202ENST00000425231 TSPY10P0CW01 314 aa33.81■■■■□ 3
CDCP1-202ENST00000425231 UHRF1BP1Q6BDS2 1440 aa33.81■■■■□ 3
CDCP1-202ENST00000425231 PPP6R1Q9UPN7 881 aa33.79■■■■□ 3
CDCP1-202ENST00000425231 CLTCQ00610 1675 aaKnown RBP33.78■■■■□ 3
CDCP1-202ENST00000425231 ILDR1Q86SU0 546 aaPredicted RBP33.74■■■□□ 2.99
CDCP1-202ENST00000425231 NPATQ14207 1427 aa33.73■■■□□ 2.99
CDCP1-202ENST00000425231 MAST1Q9Y2H9 1570 aa33.72■■■□□ 2.99
CDCP1-202ENST00000425231 KIF3BO15066 747 aa33.72■■■□□ 2.99
CDCP1-202ENST00000425231 PTPN23Q9H3S7 1636 aa33.65■■■□□ 2.98
CDCP1-202ENST00000425231 PTPRKQ15262 1439 aa33.65■■■□□ 2.98
CDCP1-202ENST00000425231 STRCQ7RTU9 1775 aa33.65■■■□□ 2.98
CDCP1-202ENST00000425231 FGD6Q6ZV73 1430 aa33.62■■■□□ 2.97
CDCP1-202ENST00000425231 ABCC5O15440 1437 aa33.59■■■□□ 2.97
CDCP1-202ENST00000425231 TCOF1Q13428 1488 aaKnown RBP33.58■■■□□ 2.97
CDCP1-202ENST00000425231 FAM135AQ9P2D6 1515 aa33.57■■■□□ 2.97
CDCP1-202ENST00000425231 KDM5DQ9BY66 1539 aa33.57■■■□□ 2.96
CDCP1-202ENST00000425231 WASHC2CQ9Y4E1 1318 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms