RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KIF14Q15058 1648 aa20.24■□□□□ 0.83
MSH5-206ENST00000423982 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
MSH5-206ENST00000423982 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
MSH5-206ENST00000423982 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
MSH5-206ENST00000423982 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
MSH5-206ENST00000423982 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
MSH5-206ENST00000423982 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
MSH5-206ENST00000423982 NEFLP07196 543 aa20.19■□□□□ 0.82
MSH5-206ENST00000423982 ZCCHC11Q5TAX3 1644 aaKnown RBP20.18■□□□□ 0.82
MSH5-206ENST00000423982 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
MSH5-206ENST00000423982 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
MSH5-206ENST00000423982 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
MSH5-206ENST00000423982 ANP32CO43423 234 aa20.17■□□□□ 0.82
MSH5-206ENST00000423982 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
MSH5-206ENST00000423982 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
MSH5-206ENST00000423982 UHRF1BP1LA0JNW5 1464 aa20.15■□□□□ 0.82
MSH5-206ENST00000423982 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
MSH5-206ENST00000423982 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
MSH5-206ENST00000423982 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
MSH5-206ENST00000423982 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
MSH5-206ENST00000423982 IRX6P78412 446 aaPredicted RBP20.1■□□□□ 0.81
MSH5-206ENST00000423982 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
MSH5-206ENST00000423982 GPATCH8Q9UKJ3 1502 aaKnown RBP20.09■□□□□ 0.81
MSH5-206ENST00000423982 ASXL2Q76L83 1435 aa20.07■□□□□ 0.8
MSH5-206ENST00000423982 ABCC10Q5T3U5 1492 aa20.06■□□□□ 0.8
MSH5-206ENST00000423982 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
MSH5-206ENST00000423982 MSH5O43196 834 aa20.05■□□□□ 0.8
MSH5-206ENST00000423982 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
MSH5-206ENST00000423982 PTPRKQ15262 1439 aa20.04■□□□□ 0.8
MSH5-206ENST00000423982 TONSLQ96HA7 1378 aa20.04■□□□□ 0.8
MSH5-206ENST00000423982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.8
MSH5-206ENST00000423982 WDR7Q9Y4E6 1490 aa20.04■□□□□ 0.8
MSH5-206ENST00000423982 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
MSH5-206ENST00000423982 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
MSH5-206ENST00000423982 HNRNPMP52272 730 aaKnown RBP eCLIP20.01■□□□□ 0.79
MSH5-206ENST00000423982 CDC42BPAQ5VT25 1732 aa20.01■□□□□ 0.79
MSH5-206ENST00000423982 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
MSH5-206ENST00000423982 CAMSAP2Q08AD1 1489 aa20■□□□□ 0.79
MSH5-206ENST00000423982 ARHGAP5Q13017 1502 aa19.98■□□□□ 0.79
MSH5-206ENST00000423982 ITSN2Q9NZM3 1697 aa19.97■□□□□ 0.79
MSH5-206ENST00000423982 TCOF1Q13428 1488 aaKnown RBP19.96■□□□□ 0.79
MSH5-206ENST00000423982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
MSH5-206ENST00000423982 CDC42BPBQ9Y5S2 1711 aa19.93■□□□□ 0.78
MSH5-206ENST00000423982 DAPK1P53355 1430 aa19.92■□□□□ 0.78
MSH5-206ENST00000423982 ABCC5O15440 1437 aa19.91■□□□□ 0.78
MSH5-206ENST00000423982 PREX2Q70Z35 1606 aa19.9■□□□□ 0.78
MSH5-206ENST00000423982 MYO5CQ9NQX4 1742 aa19.89■□□□□ 0.77
MSH5-206ENST00000423982 CCDC184Q52MB2 194 aa19.89■□□□□ 0.77
MSH5-206ENST00000423982 EFCAB2Q5VUJ9 269 aa19.89■□□□□ 0.77
MSH5-206ENST00000423982 SAMD9LQ8IVG5 1584 aa19.88■□□□□ 0.77
MSH5-206ENST00000423982 PLCH2O75038 1416 aa19.88■□□□□ 0.77
MSH5-206ENST00000423982 WASHC2AQ641Q2 1341 aa19.87■□□□□ 0.77
MSH5-206ENST00000423982 SYCP2Q9BX26 1530 aa19.86■□□□□ 0.77
MSH5-206ENST00000423982 FAM69CQ0P6D2 419 aa19.86■□□□□ 0.77
MSH5-206ENST00000423982 HFM1A2PYH4 1435 aa19.86■□□□□ 0.77
MSH5-206ENST00000423982 TSPY4P0CV99 314 aa19.84■□□□□ 0.77
MSH5-206ENST00000423982 TSPY10P0CW01 314 aa19.84■□□□□ 0.77
MSH5-206ENST00000423982 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
MSH5-206ENST00000423982 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
MSH5-206ENST00000423982 NAIPQ13075 1403 aa19.84■□□□□ 0.77
MSH5-206ENST00000423982 CD109Q6YHK3 1445 aa19.84■□□□□ 0.77
MSH5-206ENST00000423982 FANCAO15360 1455 aa19.83■□□□□ 0.76
MSH5-206ENST00000423982 AFAP1Q8N556 730 aa19.82■□□□□ 0.76
MSH5-206ENST00000423982 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
MSH5-206ENST00000423982 ABCA9Q8IUA7 1624 aa19.81■□□□□ 0.76
MSH5-206ENST00000423982 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
MSH5-206ENST00000423982 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
MSH5-206ENST00000423982 C9orf84Q5VXU9 1444 aa19.79■□□□□ 0.76
MSH5-206ENST00000423982 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
MSH5-206ENST00000423982 KDM6BO15054 1643 aa19.77■□□□□ 0.76
MSH5-206ENST00000423982 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
MSH5-206ENST00000423982 FANCIQ9NVI1 1328 aa19.77■□□□□ 0.76
MSH5-206ENST00000423982 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.76
MSH5-206ENST00000423982 CCDC141Q6ZP82 1450 aa19.77■□□□□ 0.75
MSH5-206ENST00000423982 FAM9BQ8IZU0 186 aa19.76■□□□□ 0.75
MSH5-206ENST00000423982 FOXD1Q16676 465 aa19.75■□□□□ 0.75
MSH5-206ENST00000423982 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
MSH5-206ENST00000423982 NCOA1Q15788 1441 aa19.74■□□□□ 0.75
MSH5-206ENST00000423982 SCAPERQ9BY12 1400 aa19.74■□□□□ 0.75
MSH5-206ENST00000423982 B4GALNT3Q6L9W6 998 aa19.74■□□□□ 0.75
MSH5-206ENST00000423982 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
MSH5-206ENST00000423982 ERICH6Q7L0X2 663 aa19.73■□□□□ 0.75
MSH5-206ENST00000423982 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
MSH5-206ENST00000423982 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
MSH5-206ENST00000423982 ABCC1P33527 1531 aa19.73■□□□□ 0.75
MSH5-206ENST00000423982 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
MSH5-206ENST00000423982 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
MSH5-206ENST00000423982 RAPGEF3O95398 923 aa19.71■□□□□ 0.75
MSH5-206ENST00000423982 KIF15Q9NS87 1388 aa19.71■□□□□ 0.75
MSH5-206ENST00000423982 ROCK1Q13464 1354 aa19.7■□□□□ 0.74
MSH5-206ENST00000423982 EIF4G2P78344 907 aaKnown RBP eCLIP19.7■□□□□ 0.74
MSH5-206ENST00000423982 KIAA1107Q9UPP5 1409 aa19.7■□□□□ 0.74
MSH5-206ENST00000423982 PLEKHH2Q8IVE3 1493 aa19.7■□□□□ 0.74
MSH5-206ENST00000423982 SPAG9O60271 1321 aaKnown RBP19.69■□□□□ 0.74
MSH5-206ENST00000423982 PPP4R2Q9NY27 417 aa19.69■□□□□ 0.74
MSH5-206ENST00000423982 DIP2BQ9P265 1576 aa19.69■□□□□ 0.74
MSH5-206ENST00000423982 ARHGEF5Q12774 1597 aa19.68■□□□□ 0.74
MSH5-206ENST00000423982 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
MSH5-206ENST00000423982 CNGB1Q14028 1251 aaPredicted RBP19.68■□□□□ 0.74
MSH5-206ENST00000423982 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms