RNA–Protein interactions for RNA: ENST00000423806.2

HMGN2P38-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 38, humanhuman

BASIC

Gene HMGN2P38, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P38-201ENST00000423806 RRAGDQ9NQL2 400 aaPredicted RBP2.83□□□□□ -1.96
HMGN2P38-201ENST00000423806 NCLP19338 710 aaKnown RBP2.82□□□□□ -1.96
HMGN2P38-201ENST00000423806 ITGAEP38570 1179 aa2.82□□□□□ -1.96
HMGN2P38-201ENST00000423806 IRX6P78412 446 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P38-201ENST00000423806 CNGB1Q14028 1251 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P38-201ENST00000423806 TPRNQ4KMQ1 711 aa2.82□□□□□ -1.96
HMGN2P38-201ENST00000423806 NEFMP07197 916 aa2.81□□□□□ -1.96
HMGN2P38-201ENST00000423806 KCNA4P22459 653 aa2.81□□□□□ -1.96
HMGN2P38-201ENST00000423806 GSE1Q14687 1217 aa2.81□□□□□ -1.96
HMGN2P38-201ENST00000423806 SUPT5HO00267 1087 aaKnown RBP2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 CLGNO14967 610 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 IGSF3O75054 1194 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 TPM2P07951 284 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 CLCN1P35523 988 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 PSEN1P49768 467 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 TMEM132AQ24JP5 1023 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 DCAF11Q8TEB1 546 aa2.8□□□□□ -1.96
HMGN2P38-201ENST00000423806 DMTNQ08495 405 aa2.79□□□□□ -1.96
HMGN2P38-201ENST00000423806 CNPY4Q8N129 248 aa2.79□□□□□ -1.96
HMGN2P38-201ENST00000423806 FRAT1Q92837 279 aaPredicted RBP2.79□□□□□ -1.96
HMGN2P38-201ENST00000423806 PUS7Q96PZ0 661 aaKnown RBP2.79□□□□□ -1.96
HMGN2P38-201ENST00000423806 PPP4R2Q9NY27 417 aa2.79□□□□□ -1.96
HMGN2P38-201ENST00000423806 ZBTB47Q9UFB7 747 aaPredicted RBP2.79□□□□□ -1.96
HMGN2P38-201ENST00000423806 HMGB1P09429 215 aaKnown RBP2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 MCCP23508 829 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 TERF1P54274 439 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 SLC20A2Q08357 652 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 PPP4R3BQ5MIZ7 849 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 ZNF622Q969S3 477 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 DDRGK1Q96HY6 314 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 MAP7D2Q96T17 732 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 SCUBE2Q9NQ36 999 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 SLC52A1Q9NWF4 448 aa2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 CCDC9Q9Y3X0 531 aaKnown RBP2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.78□□□□□ -1.96
HMGN2P38-201ENST00000423806 PHF14O94880 888 aa2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 IRX3P78415 501 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 WWC1Q8IX03 1113 aa2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 PLCD3Q8N3E9 789 aa2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 PNNQ9H307 717 aaKnown RBP2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 PRDM10Q9NQV6 1147 aa2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 NCAPD3P42695 1498 aa2.77□□□□□ -1.97
HMGN2P38-201ENST00000423806 CCER2I3L3R5 266 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 CLSTN1O94985 981 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 KIF20AO95235 890 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 PTMAP06454 111 aaKnown RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 ZSCAN20P17040 1043 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 ANP32AP39687 249 aaKnown RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 RIPK4P57078 832 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 FAM193AP78312 1265 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 AXDND1Q5T1B0 1012 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 TMED8Q6PL24 325 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 FAM43BQ6ZT52 329 aaPredicted RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 CEP120Q8N960 986 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 KCNH8Q96L42 1107 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 PLCD4Q9BRC7 762 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 GTPBP4Q9BZE4 634 aaKnown RBP2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 HDAC5Q9UQL6 1122 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 SHROOM4Q9ULL8 1493 aa2.76□□□□□ -1.97
HMGN2P38-201ENST00000423806 SOX12O15370 315 aa2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 NPM3O75607 178 aaKnown RBP2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 NPM1P06748 294 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 SETQ01105 290 aaPredicted RBP2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 NFKBIBQ15653 356 aa2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 TAF3Q5VWG9 929 aa2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 ZNF592Q92610 1267 aa2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 ANP32BQ92688 251 aaKnown RBP2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 CARD10Q9BWT7 1032 aa2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 YY1AP1Q9H869 796 aa2.75□□□□□ -1.97
HMGN2P38-201ENST00000423806 VGLL3A8MV65 326 aa2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 MYCNP04198 464 aaPredicted RBP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 CD44P16070 742 aaKnown RBP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 NBPF20Q3BBV1 942 aa2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 L1TD1Q5T7N2 865 aaKnown RBP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 TRIM44Q96DX7 344 aaPredicted RBP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 GEMIN8Q9NWZ8 242 aaKnown RBP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 ZHX1Q9UKY1 873 aaPredicted RBP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 WRNQ14191 1432 aaPredicted RBP eCLIP2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 EEA1Q15075 1411 aa2.74□□□□□ -1.97
HMGN2P38-201ENST00000423806 FSD2A1L4K1 749 aa2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 GOLGA6L3A6NEY3 463 aa2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 MAFGO15525 162 aa2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 LETM1O95202 739 aaPredicted RBP2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 UBTFP17480 764 aaKnown RBP2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 PTMSP20962 102 aa2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 CC2D2BQ6DHV5 1058 aa2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 MTERF4Q7Z6M4 381 aaKnown RBP2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 EGFL6Q8IUX8 553 aa2.73□□□□□ -1.97
HMGN2P38-201ENST00000423806 POTEJP0CG39 1038 aa2.72□□□□□ -1.97
HMGN2P38-201ENST00000423806 RALBP1Q15311 655 aa2.72□□□□□ -1.97
HMGN2P38-201ENST00000423806 DNAJC2Q99543 621 aaKnown RBP2.72□□□□□ -1.97
HMGN2P38-201ENST00000423806 POLR3GLQ9BT43 218 aa2.72□□□□□ -1.97
HMGN2P38-201ENST00000423806 SH3BP1Q9Y3L3 701 aa2.72□□□□□ -1.97
HMGN2P38-201ENST00000423806 LAS1LQ9Y4W2 734 aaKnown RBP2.72□□□□□ -1.97
HMGN2P38-201ENST00000423806 RNF123Q5XPI4 1314 aa2.71□□□□□ -1.98
HMGN2P38-201ENST00000423806 ZBED9Q6R2W3 1325 aa2.71□□□□□ -1.98
HMGN2P38-201ENST00000423806 TTC36A6NLP5 189 aa2.71□□□□□ -1.98
HMGN2P38-201ENST00000423806 PATL2C9JE40 543 aaKnown RBP2.71□□□□□ -1.98
HMGN2P38-201ENST00000423806 TULP2O00295 520 aa2.71□□□□□ -1.98
HMGN2P38-201ENST00000423806 TCERG1O14776 1098 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms