RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
NUP50-206ENST00000422489 PCF11O94913 1555 aaKnown RBP14.87□□□□□ -0.03
NUP50-206ENST00000422489 YEATS2Q9ULM3 1422 aa14.87□□□□□ -0.03
NUP50-206ENST00000422489 KIF14Q15058 1648 aa14.87□□□□□ -0.03
NUP50-206ENST00000422489 ARHGAP5Q13017 1502 aa14.87□□□□□ -0.03
NUP50-206ENST00000422489 POGZQ7Z3K3 1410 aa14.85□□□□□ -0.03
NUP50-206ENST00000422489 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
NUP50-206ENST00000422489 MAGI2Q86UL8 1455 aa14.84□□□□□ -0.03
NUP50-206ENST00000422489 ZFYVE16Q7Z3T8 1539 aa14.83□□□□□ -0.04
NUP50-206ENST00000422489 PTPRMP28827 1452 aa14.82□□□□□ -0.04
NUP50-206ENST00000422489 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
NUP50-206ENST00000422489 CEP162Q5TB80 1403 aa14.82□□□□□ -0.04
NUP50-206ENST00000422489 LRRIQ1Q96JM4 1722 aa14.81□□□□□ -0.04
NUP50-206ENST00000422489 HNRNPMP52272 730 aaKnown RBP eCLIP14.81□□□□□ -0.04
NUP50-206ENST00000422489 CFDP1Q9UEE9 299 aaPredicted RBP14.81□□□□□ -0.04
NUP50-206ENST00000422489 MTUS2Q5JR59 1369 aa14.81□□□□□ -0.04
NUP50-206ENST00000422489 ATP10AO60312 1499 aa14.81□□□□□ -0.04
NUP50-206ENST00000422489 MYO5CQ9NQX4 1742 aa14.8□□□□□ -0.04
NUP50-206ENST00000422489 ARHGEF40Q8TER5 1519 aa14.8□□□□□ -0.04
NUP50-206ENST00000422489 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
NUP50-206ENST00000422489 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
NUP50-206ENST00000422489 ADAMTSL3P82987 1691 aa14.78□□□□□ -0.04
NUP50-206ENST00000422489 ZNF518AQ6AHZ1 1483 aa14.78□□□□□ -0.04
NUP50-206ENST00000422489 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
NUP50-206ENST00000422489 TRAPPC8Q9Y2L5 1435 aa14.77□□□□□ -0.04
NUP50-206ENST00000422489 BCORL1Q5H9F3 1711 aa14.76□□□□□ -0.05
NUP50-206ENST00000422489 ARHGEF12Q9NZN5 1544 aa14.76□□□□□ -0.05
NUP50-206ENST00000422489 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
NUP50-206ENST00000422489 MADDQ8WXG6 1647 aa14.75□□□□□ -0.05
NUP50-206ENST00000422489 CEBPAP49715 358 aaPredicted RBP14.75□□□□□ -0.05
NUP50-206ENST00000422489 GPATCH8Q9UKJ3 1502 aaKnown RBP14.75□□□□□ -0.05
NUP50-206ENST00000422489 SPAG9O60271 1321 aaKnown RBP14.74□□□□□ -0.05
NUP50-206ENST00000422489 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
NUP50-206ENST00000422489 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
NUP50-206ENST00000422489 CDC42BPBQ9Y5S2 1711 aa14.72□□□□□ -0.05
NUP50-206ENST00000422489 MLH3Q9UHC1 1453 aa14.71□□□□□ -0.05
NUP50-206ENST00000422489 HSPA2P54652 639 aa14.71□□□□□ -0.05
NUP50-206ENST00000422489 PREX2Q70Z35 1606 aa14.7□□□□□ -0.06
NUP50-206ENST00000422489 RIMS1Q86UR5 1692 aaKnown RBP14.7□□□□□ -0.06
NUP50-206ENST00000422489 ABCC1P33527 1531 aa14.69□□□□□ -0.06
NUP50-206ENST00000422489 KDM5CP41229 1560 aa14.68□□□□□ -0.06
NUP50-206ENST00000422489 SIGLEC1Q9BZZ2 1709 aa14.68□□□□□ -0.06
NUP50-206ENST00000422489 ILDR1Q86SU0 546 aaPredicted RBP14.67□□□□□ -0.06
NUP50-206ENST00000422489 PLEKHH2Q8IVE3 1493 aa14.66□□□□□ -0.06
NUP50-206ENST00000422489 CDC42BPAQ5VT25 1732 aa14.66□□□□□ -0.06
NUP50-206ENST00000422489 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
NUP50-206ENST00000422489 SAMD9LQ8IVG5 1584 aa14.65□□□□□ -0.06
NUP50-206ENST00000422489 DIP2CQ9Y2E4 1556 aa14.65□□□□□ -0.06
NUP50-206ENST00000422489 SYCP2Q9BX26 1530 aa14.65□□□□□ -0.06
NUP50-206ENST00000422489 APLP2Q06481 763 aa14.64□□□□□ -0.07
NUP50-206ENST00000422489 GGT6Q6P531 493 aa14.64□□□□□ -0.07
NUP50-206ENST00000422489 EHBP1L1Q8N3D4 1523 aa14.64□□□□□ -0.07
NUP50-206ENST00000422489 VPS8Q8N3P4 1428 aa14.64□□□□□ -0.07
NUP50-206ENST00000422489 ITSN2Q9NZM3 1697 aa14.63□□□□□ -0.07
NUP50-206ENST00000422489 KANK4Q5T7N3 995 aaPredicted RBP14.63□□□□□ -0.07
NUP50-206ENST00000422489 LMTK3Q96Q04 1460 aa14.63□□□□□ -0.07
NUP50-206ENST00000422489 ABCA6Q8N139 1617 aa14.62□□□□□ -0.07
NUP50-206ENST00000422489 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
NUP50-206ENST00000422489 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
NUP50-206ENST00000422489 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
NUP50-206ENST00000422489 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
NUP50-206ENST00000422489 TIAM1Q13009 1591 aa14.6□□□□□ -0.07
NUP50-206ENST00000422489 AGLP35573 1532 aa14.59□□□□□ -0.07
NUP50-206ENST00000422489 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
NUP50-206ENST00000422489 A2MP01023 1474 aa14.58□□□□□ -0.08
NUP50-206ENST00000422489 KIDINS220Q9ULH0 1771 aa14.58□□□□□ -0.08
NUP50-206ENST00000422489 REREQ9P2R6 1566 aa14.58□□□□□ -0.08
NUP50-206ENST00000422489 MBD5Q9P267 1494 aa14.57□□□□□ -0.08
NUP50-206ENST00000422489 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
NUP50-206ENST00000422489 ATP7AQ04656 1500 aa14.56□□□□□ -0.08
NUP50-206ENST00000422489 KIF3BO15066 747 aa14.55□□□□□ -0.08
NUP50-206ENST00000422489 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
NUP50-206ENST00000422489 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
NUP50-206ENST00000422489 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
NUP50-206ENST00000422489 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
NUP50-206ENST00000422489 CAMSAP2Q08AD1 1489 aa14.53□□□□□ -0.08
NUP50-206ENST00000422489 RTEL1-TNFRSF6BF6WH68 1400 aa14.53□□□□□ -0.08
NUP50-206ENST00000422489 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
NUP50-206ENST00000422489 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
NUP50-206ENST00000422489 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
NUP50-206ENST00000422489 FBXO41Q8TF61 875 aa14.51□□□□□ -0.09
NUP50-206ENST00000422489 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
NUP50-206ENST00000422489 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
NUP50-206ENST00000422489 MAP3K1Q13233 1512 aa14.49□□□□□ -0.09
NUP50-206ENST00000422489 WASHC2CQ9Y4E1 1318 aa14.48□□□□□ -0.09
NUP50-206ENST00000422489 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
NUP50-206ENST00000422489 CERKQ8TCT0 537 aa14.46□□□□□ -0.09
NUP50-206ENST00000422489 C3P01024 1663 aa14.46□□□□□ -0.1
NUP50-206ENST00000422489 PREX1Q8TCU6 1659 aa14.46□□□□□ -0.1
NUP50-206ENST00000422489 FBXO31Q5XUX0 539 aaPredicted RBP14.45□□□□□ -0.1
NUP50-206ENST00000422489 MIA2Q96PC5 1412 aa14.45□□□□□ -0.1
NUP50-206ENST00000422489 PLXNC1O60486 1568 aa14.44□□□□□ -0.1
NUP50-206ENST00000422489 NPATQ14207 1427 aa14.44□□□□□ -0.1
NUP50-206ENST00000422489 NCKAP5LQ9HCH0 1330 aa14.43□□□□□ -0.1
NUP50-206ENST00000422489 RRP7BPQ9NSQ0 103 aa14.43□□□□□ -0.1
NUP50-206ENST00000422489 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
NUP50-206ENST00000422489 PTPRKQ15262 1439 aa14.42□□□□□ -0.1
NUP50-206ENST00000422489 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
NUP50-206ENST00000422489 CLTCQ00610 1675 aaKnown RBP14.42□□□□□ -0.1
NUP50-206ENST00000422489 MSH5O43196 834 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms