RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 C2orf72A6NCS6 295 aa11.56□□□□□ -0.56
LINC00397-201ENST00000422074 FAM163AQ96GL9 167 aaPredicted RBP11.56□□□□□ -0.56
LINC00397-201ENST00000422074 ST18O60284 1047 aa11.55□□□□□ -0.56
LINC00397-201ENST00000422074 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
LINC00397-201ENST00000422074 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
LINC00397-201ENST00000422074 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
LINC00397-201ENST00000422074 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
LINC00397-201ENST00000422074 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
LINC00397-201ENST00000422074 FOXK1P85037 733 aa11.49□□□□□ -0.57
LINC00397-201ENST00000422074 ZSWIM6Q9HCJ5 1215 aa11.47□□□□□ -0.57
LINC00397-201ENST00000422074 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
LINC00397-201ENST00000422074 SLC34A2O95436 690 aa11.46□□□□□ -0.57
LINC00397-201ENST00000422074 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
LINC00397-201ENST00000422074 POTEMA6NI47 508 aa11.44□□□□□ -0.58
LINC00397-201ENST00000422074 PDE4AP27815 886 aa11.44□□□□□ -0.58
LINC00397-201ENST00000422074 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
LINC00397-201ENST00000422074 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
LINC00397-201ENST00000422074 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
LINC00397-201ENST00000422074 DSG2Q14126 1118 aa11.43□□□□□ -0.58
LINC00397-201ENST00000422074 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
LINC00397-201ENST00000422074 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
LINC00397-201ENST00000422074 MFSD10Q14728 455 aa11.41□□□□□ -0.58
LINC00397-201ENST00000422074 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
LINC00397-201ENST00000422074 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
LINC00397-201ENST00000422074 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
LINC00397-201ENST00000422074 PTCD2Q8WV60 388 aaKnown RBP11.37□□□□□ -0.59
LINC00397-201ENST00000422074 PPP1R15BQ5SWA1 713 aa11.36□□□□□ -0.59
LINC00397-201ENST00000422074 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
LINC00397-201ENST00000422074 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
LINC00397-201ENST00000422074 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
LINC00397-201ENST00000422074 EMP3P54852 163 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 ARSIQ5FYB1 569 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 PCDH10Q9P2E7 1040 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
LINC00397-201ENST00000422074 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
LINC00397-201ENST00000422074 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
LINC00397-201ENST00000422074 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
LINC00397-201ENST00000422074 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
LINC00397-201ENST00000422074 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00397-201ENST00000422074 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
LINC00397-201ENST00000422074 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
LINC00397-201ENST00000422074 TBC1D12O60347 775 aa11.25□□□□□ -0.61
LINC00397-201ENST00000422074 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
LINC00397-201ENST00000422074 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
LINC00397-201ENST00000422074 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
LINC00397-201ENST00000422074 NUDT7P0C024 238 aa11.23□□□□□ -0.61
LINC00397-201ENST00000422074 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
LINC00397-201ENST00000422074 ERBB3P21860 1342 aa11.23□□□□□ -0.61
LINC00397-201ENST00000422074 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
LINC00397-201ENST00000422074 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
LINC00397-201ENST00000422074 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
LINC00397-201ENST00000422074 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
LINC00397-201ENST00000422074 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00397-201ENST00000422074 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
LINC00397-201ENST00000422074 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
LINC00397-201ENST00000422074 PSDA5PKW4 1024 aaPredicted RBP11.15□□□□□ -0.62
LINC00397-201ENST00000422074 ARIH1Q9Y4X5 557 aaPredicted RBP11.15□□□□□ -0.62
LINC00397-201ENST00000422074 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
LINC00397-201ENST00000422074 WDR70Q9NW82 654 aa11.14□□□□□ -0.63
LINC00397-201ENST00000422074 E2F4Q16254 413 aa11.13□□□□□ -0.63
LINC00397-201ENST00000422074 EVI5O60447 810 aa11.12□□□□□ -0.63
LINC00397-201ENST00000422074 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
LINC00397-201ENST00000422074 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
LINC00397-201ENST00000422074 DPYSL4O14531 572 aa11.07□□□□□ -0.64
LINC00397-201ENST00000422074 PBX2P40425 430 aa11.06□□□□□ -0.64
LINC00397-201ENST00000422074 FOSBP53539 338 aa11.05□□□□□ -0.64
LINC00397-201ENST00000422074 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
LINC00397-201ENST00000422074 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
LINC00397-201ENST00000422074 PTGER2P43116 358 aa11.04□□□□□ -0.64
LINC00397-201ENST00000422074 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
LINC00397-201ENST00000422074 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
LINC00397-201ENST00000422074 PDIA6Q15084 440 aa11.03□□□□□ -0.64
LINC00397-201ENST00000422074 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
LINC00397-201ENST00000422074 ZNF454Q8N9F8 522 aa11□□□□□ -0.65
LINC00397-201ENST00000422074 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
LINC00397-201ENST00000422074 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
LINC00397-201ENST00000422074 ARHGAP33O14559 1287 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 PHF14O94880 888 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
LINC00397-201ENST00000422074 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
LINC00397-201ENST00000422074 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
LINC00397-201ENST00000422074 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00397-201ENST00000422074 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
LINC00397-201ENST00000422074 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 FBXW7Q969H0 707 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 EPAS1Q99814 870 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 AXIN2Q9Y2T1 843 aa10.95□□□□□ -0.66
LINC00397-201ENST00000422074 TYW1BQ6NUM6 668 aa10.93□□□□□ -0.66
LINC00397-201ENST00000422074 ADAM33Q9BZ11 813 aa10.93□□□□□ -0.66
LINC00397-201ENST00000422074 PSEN2P49810 448 aa10.91□□□□□ -0.66
LINC00397-201ENST00000422074 TK2O00142 265 aa10.9□□□□□ -0.66
LINC00397-201ENST00000422074 PTPREP23469 700 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 DMRTA1Q5VZB9 504 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 DDX12PQ92771 950 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
LINC00397-201ENST00000422074 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
LINC00397-201ENST00000422074 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms