RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 SCAPERQ9BY12 1400 aa39.92■■■■□ 3.98
SNAPC3-203ENST00000421710 MTUS2Q5JR59 1369 aa39.92■■■■□ 3.98
SNAPC3-203ENST00000421710 CDC42BPBQ9Y5S2 1711 aa39.91■■■■□ 3.98
SNAPC3-203ENST00000421710 ZMYM4Q5VZL5 1548 aa39.9■■■■□ 3.98
SNAPC3-203ENST00000421710 VPS8Q8N3P4 1428 aa39.9■■■■□ 3.98
SNAPC3-203ENST00000421710 POGZQ7Z3K3 1410 aa39.89■■■■□ 3.98
SNAPC3-203ENST00000421710 EHBP1L1Q8N3D4 1523 aa39.86■■■■□ 3.97
SNAPC3-203ENST00000421710 CDC42BPAQ5VT25 1732 aa39.85■■■■□ 3.97
SNAPC3-203ENST00000421710 ARHGEF40Q8TER5 1519 aa39.85■■■■□ 3.97
SNAPC3-203ENST00000421710 MAGI2Q86UL8 1455 aa39.83■■■■□ 3.97
SNAPC3-203ENST00000421710 ZNF518AQ6AHZ1 1483 aa39.78■■■■□ 3.96
SNAPC3-203ENST00000421710 ZFYVE16Q7Z3T8 1539 aa39.77■■■■□ 3.96
SNAPC3-203ENST00000421710 GPATCH8Q9UKJ3 1502 aaKnown RBP39.75■■■■□ 3.95
SNAPC3-203ENST00000421710 CCNB3Q8WWL7 1395 aa39.74■■■■□ 3.95
SNAPC3-203ENST00000421710 TIAM1Q13009 1591 aa39.74■■■■□ 3.95
SNAPC3-203ENST00000421710 ABCC1P33527 1531 aa39.73■■■■□ 3.95
SNAPC3-203ENST00000421710 KDM5CP41229 1560 aa39.69■■■■□ 3.94
SNAPC3-203ENST00000421710 ITSN2Q9NZM3 1697 aa39.67■■■■□ 3.94
SNAPC3-203ENST00000421710 YEATS2Q9ULM3 1422 aa39.66■■■■□ 3.94
SNAPC3-203ENST00000421710 CFDP1Q9UEE9 299 aaPredicted RBP39.64■■■■□ 3.94
SNAPC3-203ENST00000421710 SUPT6HQ7KZ85 1726 aaKnown RBP39.64■■■■□ 3.94
SNAPC3-203ENST00000421710 ARID4BQ4LE39 1312 aaPredicted RBP39.64■■■■□ 3.94
SNAPC3-203ENST00000421710 MAP3K1Q13233 1512 aa39.63■■■■□ 3.93
SNAPC3-203ENST00000421710 SAMD9LQ8IVG5 1584 aa39.62■■■■□ 3.93
SNAPC3-203ENST00000421710 AFAP1Q8N556 730 aa39.61■■■■□ 3.93
SNAPC3-203ENST00000421710 HECW2Q9P2P5 1572 aa39.61■■■■□ 3.93
SNAPC3-203ENST00000421710 ZNF777Q9ULD5 760 aaPredicted RBP39.61■■■■□ 3.93
SNAPC3-203ENST00000421710 PLEKHH2Q8IVE3 1493 aa39.6■■■■□ 3.93
SNAPC3-203ENST00000421710 ARHGEF12Q9NZN5 1544 aa39.6■■■■□ 3.93
SNAPC3-203ENST00000421710 BCORL1Q5H9F3 1711 aa39.58■■■■□ 3.93
SNAPC3-203ENST00000421710 TRAPPC8Q9Y2L5 1435 aa39.57■■■■□ 3.92
SNAPC3-203ENST00000421710 ATP10AO60312 1499 aa39.56■■■■□ 3.92
SNAPC3-203ENST00000421710 NCOA2Q15596 1464 aa39.56■■■■□ 3.92
SNAPC3-203ENST00000421710 LRRC9Q6ZRR7 1453 aa39.56■■■■□ 3.92
SNAPC3-203ENST00000421710 MLH3Q9UHC1 1453 aa39.56■■■■□ 3.92
SNAPC3-203ENST00000421710 ADAMTSL3P82987 1691 aa39.55■■■■□ 3.92
SNAPC3-203ENST00000421710 C9orf84Q5VXU9 1444 aa39.54■■■■□ 3.92
SNAPC3-203ENST00000421710 KIAA1107Q9UPP5 1409 aa39.54■■■■□ 3.92
SNAPC3-203ENST00000421710 SYCP2Q9BX26 1530 aa39.54■■■■□ 3.92
SNAPC3-203ENST00000421710 MYT1LQ9UL68 1186 aa39.53■■■■□ 3.92
SNAPC3-203ENST00000421710 APLP2Q06481 763 aa39.47■■■■□ 3.91
SNAPC3-203ENST00000421710 DIP2CQ9Y2E4 1556 aa39.46■■■■□ 3.91
SNAPC3-203ENST00000421710 SIGLEC1Q9BZZ2 1709 aa39.44■■■■□ 3.9
SNAPC3-203ENST00000421710 HNRNPMP52272 730 aaKnown RBP eCLIP39.42■■■■□ 3.9
SNAPC3-203ENST00000421710 ABCA6Q8N139 1617 aa39.42■■■■□ 3.9
SNAPC3-203ENST00000421710 MADDQ8WXG6 1647 aa39.42■■■■□ 3.9
SNAPC3-203ENST00000421710 REREQ9P2R6 1566 aa39.42■■■■□ 3.9
SNAPC3-203ENST00000421710 KIDINS220Q9ULH0 1771 aa39.39■■■■□ 3.9
SNAPC3-203ENST00000421710 SPAG9O60271 1321 aaKnown RBP39.37■■■■□ 3.89
SNAPC3-203ENST00000421710 PTPRMP28827 1452 aa39.37■■■■□ 3.89
SNAPC3-203ENST00000421710 KANK4Q5T7N3 995 aaPredicted RBP39.36■■■■□ 3.89
SNAPC3-203ENST00000421710 ZNF644Q9H582 1327 aaPredicted RBP39.33■■■■□ 3.89
SNAPC3-203ENST00000421710 ATP7AQ04656 1500 aa39.31■■■■□ 3.88
SNAPC3-203ENST00000421710 CAMSAP2Q08AD1 1489 aa39.3■■■■□ 3.88
SNAPC3-203ENST00000421710 INO80Q9ULG1 1556 aaPredicted RBP39.3■■■■□ 3.88
SNAPC3-203ENST00000421710 RIMS1Q86UR5 1692 aaKnown RBP39.3■■■■□ 3.88
SNAPC3-203ENST00000421710 MBD5Q9P267 1494 aa39.3■■■■□ 3.88
SNAPC3-203ENST00000421710 MLECQ14165 292 aa39.29■■■■□ 3.88
SNAPC3-203ENST00000421710 AGLP35573 1532 aa39.27■■■■□ 3.88
SNAPC3-203ENST00000421710 FER1L4A9Z1Z3 1794 aa39.26■■■■□ 3.88
SNAPC3-203ENST00000421710 RSPH4AQ5TD94 716 aa39.23■■■■□ 3.87
SNAPC3-203ENST00000421710 MYOM3Q5VTT5 1437 aa39.23■■■■□ 3.87
SNAPC3-203ENST00000421710 CCDC141Q6ZP82 1450 aa39.22■■■■□ 3.87
SNAPC3-203ENST00000421710 MIA2Q96PC5 1412 aa39.21■■■■□ 3.87
SNAPC3-203ENST00000421710 RTEL1-TNFRSF6BF6WH68 1400 aa39.18■■■■□ 3.86
SNAPC3-203ENST00000421710 ARHGEF5Q12774 1597 aa39.17■■■■□ 3.86
SNAPC3-203ENST00000421710 ADGBQ8N7X0 1667 aa39.13■■■■□ 3.86
SNAPC3-203ENST00000421710 A2MP01023 1474 aa39.12■■■■□ 3.85
SNAPC3-203ENST00000421710 PLXNC1O60486 1568 aa39.11■■■■□ 3.85
SNAPC3-203ENST00000421710 TSPY4P0CV99 314 aa39.05■■■■□ 3.84
SNAPC3-203ENST00000421710 TSPY10P0CW01 314 aa39.05■■■■□ 3.84
SNAPC3-203ENST00000421710 ESF1Q9H501 851 aaKnown RBP39.04■■■■□ 3.84
SNAPC3-203ENST00000421710 CNTLNQ9NXG0 1405 aa38.98■■■■□ 3.83
SNAPC3-203ENST00000421710 PLPPR3Q6T4P5 718 aa38.98■■■■□ 3.83
SNAPC3-203ENST00000421710 PTPN23Q9H3S7 1636 aa38.98■■■■□ 3.83
SNAPC3-203ENST00000421710 MAST1Q9Y2H9 1570 aa38.96■■■■□ 3.83
SNAPC3-203ENST00000421710 FGD6Q6ZV73 1430 aa38.96■■■■□ 3.83
SNAPC3-203ENST00000421710 DHX29Q7Z478 1369 aaKnown RBP38.95■■■■□ 3.83
SNAPC3-203ENST00000421710 TCOF1Q13428 1488 aaKnown RBP38.89■■■■□ 3.82
SNAPC3-203ENST00000421710 LMTK3Q96Q04 1460 aa38.87■■■■□ 3.81
SNAPC3-203ENST00000421710 MROH2AA6NES4 1674 aa38.87■■■■□ 3.81
SNAPC3-203ENST00000421710 C3P01024 1663 aa38.87■■■■□ 3.81
SNAPC3-203ENST00000421710 PPP6R1Q9UPN7 881 aa38.86■■■■□ 3.81
SNAPC3-203ENST00000421710 CEBPAP49715 358 aaPredicted RBP38.85■■■■□ 3.81
SNAPC3-203ENST00000421710 GGT6Q6P531 493 aa38.84■■■■□ 3.81
SNAPC3-203ENST00000421710 SHANK2Q9UPX8 1470 aa38.84■■■■□ 3.81
SNAPC3-203ENST00000421710 CROCC2H7BZ55 1655 aa38.83■■■■□ 3.81
SNAPC3-203ENST00000421710 PREX1Q8TCU6 1659 aa38.81■■■■□ 3.8
SNAPC3-203ENST00000421710 DNMT1P26358 1616 aaKnown RBP38.81■■■■□ 3.8
SNAPC3-203ENST00000421710 CLTCQ00610 1675 aaKnown RBP38.78■■■■□ 3.8
SNAPC3-203ENST00000421710 ABCC5O15440 1437 aa38.78■■■■□ 3.8
SNAPC3-203ENST00000421710 SETD1BQ9UPS6 1966 aaKnown RBP38.77■■■■□ 3.8
SNAPC3-203ENST00000421710 KIF3BO15066 747 aa38.77■■■■□ 3.8
SNAPC3-203ENST00000421710 DAPK1P53355 1430 aa38.77■■■■□ 3.8
SNAPC3-203ENST00000421710 FAM135AQ9P2D6 1515 aa38.75■■■■□ 3.79
SNAPC3-203ENST00000421710 ZMYM3Q14202 1370 aa38.73■■■■□ 3.79
SNAPC3-203ENST00000421710 EIF2AK4Q9P2K8 1649 aaKnown RBP38.71■■■■□ 3.79
SNAPC3-203ENST00000421710 UHRF1BP1Q6BDS2 1440 aa38.71■■■■□ 3.79
SNAPC3-203ENST00000421710 DUOX2Q9NRD8 1548 aa38.7■■■■□ 3.79
SNAPC3-203ENST00000421710 NPATQ14207 1427 aa38.69■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms