RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.04
NUP50-205ENST00000419387 RICTORQ6R327 1708 aa15.32■□□□□ 0.04
NUP50-205ENST00000419387 CLIP1P30622 1438 aa15.32■□□□□ 0.04
NUP50-205ENST00000419387 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
NUP50-205ENST00000419387 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
NUP50-205ENST00000419387 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
NUP50-205ENST00000419387 KIF14Q15058 1648 aa15.29■□□□□ 0.04
NUP50-205ENST00000419387 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
NUP50-205ENST00000419387 ARHGEF40Q8TER5 1519 aa15.28■□□□□ 0.04
NUP50-205ENST00000419387 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
NUP50-205ENST00000419387 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
NUP50-205ENST00000419387 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
NUP50-205ENST00000419387 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
NUP50-205ENST00000419387 PTPRMP28827 1452 aa15.27■□□□□ 0.04
NUP50-205ENST00000419387 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.04
NUP50-205ENST00000419387 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.04
NUP50-205ENST00000419387 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
NUP50-205ENST00000419387 BCORL1Q5H9F3 1711 aa15.26■□□□□ 0.03
NUP50-205ENST00000419387 ZFYVE16Q7Z3T8 1539 aa15.26■□□□□ 0.03
NUP50-205ENST00000419387 ARHGAP5Q13017 1502 aa15.24■□□□□ 0.03
NUP50-205ENST00000419387 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
NUP50-205ENST00000419387 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
NUP50-205ENST00000419387 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
NUP50-205ENST00000419387 ATP10AO60312 1499 aa15.2■□□□□ 0.02
NUP50-205ENST00000419387 ZNF518AQ6AHZ1 1483 aa15.2■□□□□ 0.02
NUP50-205ENST00000419387 MLECQ14165 292 aa15.2■□□□□ 0.02
NUP50-205ENST00000419387 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
NUP50-205ENST00000419387 CDC42BPBQ9Y5S2 1711 aa15.19■□□□□ 0.02
NUP50-205ENST00000419387 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
NUP50-205ENST00000419387 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
NUP50-205ENST00000419387 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
NUP50-205ENST00000419387 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
NUP50-205ENST00000419387 KDM5CP41229 1560 aa15.16■□□□□ 0.02
NUP50-205ENST00000419387 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
NUP50-205ENST00000419387 ZNF777Q9ULD5 760 aaPredicted RBP15.15■□□□□ 0.02
NUP50-205ENST00000419387 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
NUP50-205ENST00000419387 ARHGEF12Q9NZN5 1544 aa15.14■□□□□ 0.01
NUP50-205ENST00000419387 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
NUP50-205ENST00000419387 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
NUP50-205ENST00000419387 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
NUP50-205ENST00000419387 ABCC1P33527 1531 aa15.12■□□□□ 0.01
NUP50-205ENST00000419387 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
NUP50-205ENST00000419387 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
NUP50-205ENST00000419387 CFDP1Q9UEE9 299 aaPredicted RBP15.11■□□□□ 0.01
NUP50-205ENST00000419387 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
NUP50-205ENST00000419387 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
NUP50-205ENST00000419387 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
NUP50-205ENST00000419387 DIP2CQ9Y2E4 1556 aa15.1■□□□□ 0.01
NUP50-205ENST00000419387 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
NUP50-205ENST00000419387 LMTK3Q96Q04 1460 aa15.09■□□□□ 0.01
NUP50-205ENST00000419387 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
NUP50-205ENST00000419387 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0.01
NUP50-205ENST00000419387 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
NUP50-205ENST00000419387 REREQ9P2R6 1566 aa15.07■□□□□ 0
NUP50-205ENST00000419387 CEBPAP49715 358 aaPredicted RBP15.07■□□□□ 0
NUP50-205ENST00000419387 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
NUP50-205ENST00000419387 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
NUP50-205ENST00000419387 ABCA6Q8N139 1617 aa15.06■□□□□ 0
NUP50-205ENST00000419387 HSPA2P54652 639 aa15.06■□□□□ 0
NUP50-205ENST00000419387 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
NUP50-205ENST00000419387 PLEKHH2Q8IVE3 1493 aa15.05■□□□□ -0
NUP50-205ENST00000419387 SYCP2Q9BX26 1530 aa15.05■□□□□ -0
NUP50-205ENST00000419387 KIDINS220Q9ULH0 1771 aa15.05■□□□□ -0
NUP50-205ENST00000419387 AGLP35573 1532 aa15.04■□□□□ -0
NUP50-205ENST00000419387 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
NUP50-205ENST00000419387 EHBP1L1Q8N3D4 1523 aa15.03■□□□□ -0
NUP50-205ENST00000419387 ESF1Q9H501 851 aaKnown RBP15.03■□□□□ -0
NUP50-205ENST00000419387 ZNF644Q9H582 1327 aaPredicted RBP15.02■□□□□ -0
NUP50-205ENST00000419387 TIAM1Q13009 1591 aa15□□□□□ -0.01
NUP50-205ENST00000419387 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
NUP50-205ENST00000419387 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
NUP50-205ENST00000419387 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
NUP50-205ENST00000419387 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
NUP50-205ENST00000419387 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
NUP50-205ENST00000419387 CNTLNQ9NXG0 1405 aa14.96□□□□□ -0.01
NUP50-205ENST00000419387 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
NUP50-205ENST00000419387 A2MP01023 1474 aa14.95□□□□□ -0.02
NUP50-205ENST00000419387 UHRF1BP1Q6BDS2 1440 aa14.95□□□□□ -0.02
NUP50-205ENST00000419387 PREX1Q8TCU6 1659 aa14.95□□□□□ -0.02
NUP50-205ENST00000419387 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
NUP50-205ENST00000419387 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
NUP50-205ENST00000419387 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
NUP50-205ENST00000419387 FBXO41Q8TF61 875 aa14.94□□□□□ -0.02
NUP50-205ENST00000419387 C3P01024 1663 aa14.93□□□□□ -0.02
NUP50-205ENST00000419387 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
NUP50-205ENST00000419387 GGT6Q6P531 493 aa14.93□□□□□ -0.02
NUP50-205ENST00000419387 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
NUP50-205ENST00000419387 LRRC9Q6ZRR7 1453 aa14.92□□□□□ -0.02
NUP50-205ENST00000419387 PLXNC1O60486 1568 aa14.91□□□□□ -0.02
NUP50-205ENST00000419387 CAMSAP2Q08AD1 1489 aa14.9□□□□□ -0.02
NUP50-205ENST00000419387 DHX29Q7Z478 1369 aaKnown RBP14.9□□□□□ -0.02
NUP50-205ENST00000419387 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
NUP50-205ENST00000419387 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
NUP50-205ENST00000419387 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
NUP50-205ENST00000419387 ADGBQ8N7X0 1667 aa14.89□□□□□ -0.03
NUP50-205ENST00000419387 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
NUP50-205ENST00000419387 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
NUP50-205ENST00000419387 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
NUP50-205ENST00000419387 NPATQ14207 1427 aa14.87□□□□□ -0.03
NUP50-205ENST00000419387 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms