RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 CEBPAP49715 358 aaPredicted RBP23.66■■□□□ 1.38
TTC38-202ENST00000417709 EFCAB2Q5VUJ9 269 aa23.66■■□□□ 1.38
TTC38-202ENST00000417709 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
TTC38-202ENST00000417709 MAGI2Q86UL8 1455 aa23.65■■□□□ 1.38
TTC38-202ENST00000417709 PLCH2O75038 1416 aa23.65■■□□□ 1.38
TTC38-202ENST00000417709 EFCAB5A4FU69 1503 aa23.64■■□□□ 1.38
TTC38-202ENST00000417709 ZMYM4Q5VZL5 1548 aa23.64■■□□□ 1.38
TTC38-202ENST00000417709 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
TTC38-202ENST00000417709 CDK11AQ9UQ88 783 aaPredicted RBP23.6■■□□□ 1.37
TTC38-202ENST00000417709 ATP10AO60312 1499 aa23.6■■□□□ 1.37
TTC38-202ENST00000417709 FER1L4A9Z1Z3 1794 aa23.6■■□□□ 1.37
TTC38-202ENST00000417709 AFAP1Q8N556 730 aa23.59■■□□□ 1.37
TTC38-202ENST00000417709 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
TTC38-202ENST00000417709 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
TTC38-202ENST00000417709 ARHGEF12Q9NZN5 1544 aa23.5■■□□□ 1.35
TTC38-202ENST00000417709 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
TTC38-202ENST00000417709 FMN1Q68DA7 1419 aa23.5■■□□□ 1.35
TTC38-202ENST00000417709 SETD1BQ9UPS6 1966 aaKnown RBP23.49■■□□□ 1.35
TTC38-202ENST00000417709 PREX1Q8TCU6 1659 aa23.45■■□□□ 1.34
TTC38-202ENST00000417709 KIF14Q15058 1648 aa23.45■■□□□ 1.34
TTC38-202ENST00000417709 ARHGAP5Q13017 1502 aa23.44■■□□□ 1.34
TTC38-202ENST00000417709 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
TTC38-202ENST00000417709 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
TTC38-202ENST00000417709 ZNF518AQ6AHZ1 1483 aa23.43■■□□□ 1.34
TTC38-202ENST00000417709 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
TTC38-202ENST00000417709 STRCQ7RTU9 1775 aa23.41■■□□□ 1.34
TTC38-202ENST00000417709 CLIP1P30622 1438 aa23.4■■□□□ 1.34
TTC38-202ENST00000417709 UHRF1BP1Q6BDS2 1440 aa23.4■■□□□ 1.34
TTC38-202ENST00000417709 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
TTC38-202ENST00000417709 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
TTC38-202ENST00000417709 CDC42BPBQ9Y5S2 1711 aa23.34■■□□□ 1.33
TTC38-202ENST00000417709 KDM5CP41229 1560 aa23.34■■□□□ 1.33
TTC38-202ENST00000417709 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.33
TTC38-202ENST00000417709 DIP2CQ9Y2E4 1556 aa23.33■■□□□ 1.33
TTC38-202ENST00000417709 LRRIQ1Q96JM4 1722 aa23.33■■□□□ 1.32
TTC38-202ENST00000417709 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
TTC38-202ENST00000417709 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
TTC38-202ENST00000417709 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
TTC38-202ENST00000417709 C3P01024 1663 aa23.29■■□□□ 1.32
TTC38-202ENST00000417709 ABCA6Q8N139 1617 aa23.28■■□□□ 1.32
TTC38-202ENST00000417709 PTPRTO14522 1441 aa23.26■■□□□ 1.31
TTC38-202ENST00000417709 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
TTC38-202ENST00000417709 HNRNPMP52272 730 aaKnown RBP eCLIP23.24■■□□□ 1.31
TTC38-202ENST00000417709 SOCS7O14512 581 aa23.23■■□□□ 1.31
TTC38-202ENST00000417709 AGLP35573 1532 aa23.23■■□□□ 1.31
TTC38-202ENST00000417709 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
TTC38-202ENST00000417709 PREX2Q70Z35 1606 aa23.21■■□□□ 1.31
TTC38-202ENST00000417709 KIDINS220Q9ULH0 1771 aa23.21■■□□□ 1.31
TTC38-202ENST00000417709 ABCC1P33527 1531 aa23.2■■□□□ 1.3
TTC38-202ENST00000417709 SPAG9O60271 1321 aaKnown RBP23.2■■□□□ 1.3
TTC38-202ENST00000417709 NCKAP5LQ9HCH0 1330 aa23.2■■□□□ 1.3
TTC38-202ENST00000417709 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
TTC38-202ENST00000417709 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
TTC38-202ENST00000417709 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
TTC38-202ENST00000417709 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
TTC38-202ENST00000417709 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
TTC38-202ENST00000417709 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
TTC38-202ENST00000417709 NCOA1Q15788 1441 aa23.15■■□□□ 1.3
TTC38-202ENST00000417709 GGT6Q6P531 493 aa23.14■■□□□ 1.29
TTC38-202ENST00000417709 CFDP1Q9UEE9 299 aaPredicted RBP23.13■■□□□ 1.29
TTC38-202ENST00000417709 SUPT6HQ7KZ85 1726 aaKnown RBP23.13■■□□□ 1.29
TTC38-202ENST00000417709 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
TTC38-202ENST00000417709 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
TTC38-202ENST00000417709 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
TTC38-202ENST00000417709 UBAP1LF5GYI3 381 aa23.1■■□□□ 1.29
TTC38-202ENST00000417709 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
TTC38-202ENST00000417709 NPATQ14207 1427 aa23.08■■□□□ 1.29
TTC38-202ENST00000417709 SYCP2Q9BX26 1530 aa23.07■■□□□ 1.28
TTC38-202ENST00000417709 MROH2AA6NES4 1674 aa23.04■■□□□ 1.28
TTC38-202ENST00000417709 CLTCQ00610 1675 aaKnown RBP23.04■■□□□ 1.28
TTC38-202ENST00000417709 PKD2Q13563 968 aa23.04■■□□□ 1.28
TTC38-202ENST00000417709 SPATA31D1Q6ZQQ2 1576 aa23.04■■□□□ 1.28
TTC38-202ENST00000417709 FYCO1Q9BQS8 1478 aa23.04■■□□□ 1.28
TTC38-202ENST00000417709 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
TTC38-202ENST00000417709 IQSEC2Q5JU85 1478 aa23.03■■□□□ 1.28
TTC38-202ENST00000417709 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
TTC38-202ENST00000417709 A2MP01023 1474 aa23.02■■□□□ 1.28
TTC38-202ENST00000417709 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
TTC38-202ENST00000417709 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
TTC38-202ENST00000417709 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
TTC38-202ENST00000417709 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
TTC38-202ENST00000417709 PPP6R1Q9UPN7 881 aa22.97■■□□□ 1.27
TTC38-202ENST00000417709 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
TTC38-202ENST00000417709 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
TTC38-202ENST00000417709 FBXO31Q5XUX0 539 aaPredicted RBP22.94■■□□□ 1.26
TTC38-202ENST00000417709 MYO3AQ8NEV4 1616 aa22.93■■□□□ 1.26
TTC38-202ENST00000417709 PLXNC1O60486 1568 aa22.92■■□□□ 1.26
TTC38-202ENST00000417709 INO80Q9ULG1 1556 aaPredicted RBP22.92■■□□□ 1.26
TTC38-202ENST00000417709 CEP170BQ9Y4F5 1589 aaPredicted RBP22.92■■□□□ 1.26
TTC38-202ENST00000417709 KIF3BO15066 747 aa22.91■■□□□ 1.26
TTC38-202ENST00000417709 PIP4K2BP78356 416 aa22.91■■□□□ 1.26
TTC38-202ENST00000417709 PLA2R1Q13018 1463 aa22.91■■□□□ 1.26
TTC38-202ENST00000417709 TCOF1Q13428 1488 aaKnown RBP22.91■■□□□ 1.26
TTC38-202ENST00000417709 ZNF142P52746 1687 aaPredicted RBP22.89■■□□□ 1.25
TTC38-202ENST00000417709 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
TTC38-202ENST00000417709 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
TTC38-202ENST00000417709 HSPA1LP34931 641 aa22.86■■□□□ 1.25
TTC38-202ENST00000417709 A2ML1A8K2U0 1454 aa22.85■■□□□ 1.25
TTC38-202ENST00000417709 MBD5Q9P267 1494 aa22.85■■□□□ 1.25
TTC38-202ENST00000417709 WASHC2CQ9Y4E1 1318 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms