RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PCF11O94913 1555 aaKnown RBP29.81■■■□□ 2.36
VPS16-204ENST00000417508 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
VPS16-204ENST00000417508 POGZQ7Z3K3 1410 aa29.8■■■□□ 2.36
VPS16-204ENST00000417508 BCORL1Q5H9F3 1711 aa29.8■■■□□ 2.36
VPS16-204ENST00000417508 ZFYVE16Q7Z3T8 1539 aa29.78■■■□□ 2.36
VPS16-204ENST00000417508 PTPRMP28827 1452 aa29.77■■■□□ 2.36
VPS16-204ENST00000417508 HECW2Q9P2P5 1572 aa29.77■■■□□ 2.36
VPS16-204ENST00000417508 ARHGAP5Q13017 1502 aa29.76■■■□□ 2.35
VPS16-204ENST00000417508 YEATS2Q9ULM3 1422 aa29.74■■■□□ 2.35
VPS16-204ENST00000417508 ZNF518AQ6AHZ1 1483 aa29.7■■■□□ 2.35
VPS16-204ENST00000417508 ATP10AO60312 1499 aa29.68■■■□□ 2.34
VPS16-204ENST00000417508 CDC42BPBQ9Y5S2 1711 aa29.68■■■□□ 2.34
VPS16-204ENST00000417508 MADDQ8WXG6 1647 aa29.67■■■□□ 2.34
VPS16-204ENST00000417508 AFAP1Q8N556 730 aa29.66■■■□□ 2.34
VPS16-204ENST00000417508 PREX2Q70Z35 1606 aa29.63■■■□□ 2.33
VPS16-204ENST00000417508 C9orf84Q5VXU9 1444 aa29.62■■■□□ 2.33
VPS16-204ENST00000417508 KDM5CP41229 1560 aa29.61■■■□□ 2.33
VPS16-204ENST00000417508 MYT1LQ9UL68 1186 aa29.59■■■□□ 2.33
VPS16-204ENST00000417508 RIMS1Q86UR5 1692 aaKnown RBP29.57■■■□□ 2.32
VPS16-204ENST00000417508 CDC42BPAQ5VT25 1732 aa29.57■■■□□ 2.32
VPS16-204ENST00000417508 SIGLEC1Q9BZZ2 1709 aa29.57■■■□□ 2.32
VPS16-204ENST00000417508 MLH3Q9UHC1 1453 aa29.56■■■□□ 2.32
VPS16-204ENST00000417508 MLECQ14165 292 aa29.56■■■□□ 2.32
VPS16-204ENST00000417508 CEP162Q5TB80 1403 aa29.54■■■□□ 2.32
VPS16-204ENST00000417508 ABCC1P33527 1531 aa29.54■■■□□ 2.32
VPS16-204ENST00000417508 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
VPS16-204ENST00000417508 ARHGEF12Q9NZN5 1544 aa29.52■■■□□ 2.32
VPS16-204ENST00000417508 GPATCH8Q9UKJ3 1502 aaKnown RBP29.52■■■□□ 2.32
VPS16-204ENST00000417508 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
VPS16-204ENST00000417508 ZNF777Q9ULD5 760 aaPredicted RBP29.5■■■□□ 2.31
VPS16-204ENST00000417508 ITSN2Q9NZM3 1697 aa29.5■■■□□ 2.31
VPS16-204ENST00000417508 CFDP1Q9UEE9 299 aaPredicted RBP29.48■■■□□ 2.31
VPS16-204ENST00000417508 CCNB3Q8WWL7 1395 aa29.48■■■□□ 2.31
VPS16-204ENST00000417508 REREQ9P2R6 1566 aa29.47■■■□□ 2.31
VPS16-204ENST00000417508 FER1L4A9Z1Z3 1794 aa29.47■■■□□ 2.31
VPS16-204ENST00000417508 DIP2CQ9Y2E4 1556 aa29.46■■■□□ 2.31
VPS16-204ENST00000417508 PLEKHH2Q8IVE3 1493 aa29.44■■■□□ 2.3
VPS16-204ENST00000417508 KIAA1107Q9UPP5 1409 aa29.44■■■□□ 2.3
VPS16-204ENST00000417508 LMTK3Q96Q04 1460 aa29.42■■■□□ 2.3
VPS16-204ENST00000417508 PLPPR3Q6T4P5 718 aa29.41■■■□□ 2.3
VPS16-204ENST00000417508 SAMD9LQ8IVG5 1584 aa29.41■■■□□ 2.3
VPS16-204ENST00000417508 AGLP35573 1532 aa29.4■■■□□ 2.3
VPS16-204ENST00000417508 HNRNPMP52272 730 aaKnown RBP eCLIP29.4■■■□□ 2.3
VPS16-204ENST00000417508 ABCA6Q8N139 1617 aa29.4■■■□□ 2.3
VPS16-204ENST00000417508 KIDINS220Q9ULH0 1771 aa29.39■■■□□ 2.29
VPS16-204ENST00000417508 EHBP1L1Q8N3D4 1523 aa29.38■■■□□ 2.29
VPS16-204ENST00000417508 SPAG9O60271 1321 aaKnown RBP29.38■■■□□ 2.29
VPS16-204ENST00000417508 LOC105371045A0A1W2PR82 267 aa29.37■■■□□ 2.29
VPS16-204ENST00000417508 SYCP2Q9BX26 1530 aa29.36■■■□□ 2.29
VPS16-204ENST00000417508 ILDR1Q86SU0 546 aaPredicted RBP29.33■■■□□ 2.29
VPS16-204ENST00000417508 ESF1Q9H501 851 aaKnown RBP29.33■■■□□ 2.29
VPS16-204ENST00000417508 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
VPS16-204ENST00000417508 CEBPAP49715 358 aaPredicted RBP29.29■■■□□ 2.28
VPS16-204ENST00000417508 TIAM1Q13009 1591 aa29.29■■■□□ 2.28
VPS16-204ENST00000417508 HSPA2P54652 639 aa29.27■■■□□ 2.28
VPS16-204ENST00000417508 VPS8Q8N3P4 1428 aa29.26■■■□□ 2.27
VPS16-204ENST00000417508 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
VPS16-204ENST00000417508 ZNF644Q9H582 1327 aaPredicted RBP29.24■■■□□ 2.27
VPS16-204ENST00000417508 CNTLNQ9NXG0 1405 aa29.24■■■□□ 2.27
VPS16-204ENST00000417508 SUPT6HQ7KZ85 1726 aaKnown RBP29.23■■■□□ 2.27
VPS16-204ENST00000417508 RSPH4AQ5TD94 716 aa29.22■■■□□ 2.27
VPS16-204ENST00000417508 PREX1Q8TCU6 1659 aa29.21■■■□□ 2.27
VPS16-204ENST00000417508 NCOA2Q15596 1464 aa29.21■■■□□ 2.27
VPS16-204ENST00000417508 MBD5Q9P267 1494 aa29.21■■■□□ 2.27
VPS16-204ENST00000417508 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.26
VPS16-204ENST00000417508 A2MP01023 1474 aa29.18■■■□□ 2.26
VPS16-204ENST00000417508 RTEL1-TNFRSF6BF6WH68 1400 aa29.18■■■□□ 2.26
VPS16-204ENST00000417508 UHRF1BP1Q6BDS2 1440 aa29.16■■■□□ 2.26
VPS16-204ENST00000417508 C3P01024 1663 aa29.15■■■□□ 2.26
VPS16-204ENST00000417508 PPP6R1Q9UPN7 881 aa29.15■■■□□ 2.26
VPS16-204ENST00000417508 MAP3K1Q13233 1512 aa29.15■■■□□ 2.26
VPS16-204ENST00000417508 LRRC9Q6ZRR7 1453 aa29.13■■■□□ 2.25
VPS16-204ENST00000417508 PLXNC1O60486 1568 aa29.13■■■□□ 2.25
VPS16-204ENST00000417508 ADGBQ8N7X0 1667 aa29.12■■■□□ 2.25
VPS16-204ENST00000417508 DMRT2Q9Y5R5 561 aa29.1■■■□□ 2.25
VPS16-204ENST00000417508 MROH2AA6NES4 1674 aa29.09■■■□□ 2.25
VPS16-204ENST00000417508 FBXO41Q8TF61 875 aa29.09■■■□□ 2.25
VPS16-204ENST00000417508 ZMYM3Q14202 1370 aa29.09■■■□□ 2.25
VPS16-204ENST00000417508 GGT6Q6P531 493 aa29.08■■■□□ 2.25
VPS16-204ENST00000417508 CAMSAP2Q08AD1 1489 aa29.08■■■□□ 2.25
VPS16-204ENST00000417508 CCDC141Q6ZP82 1450 aa29.08■■■□□ 2.25
VPS16-204ENST00000417508 DHX29Q7Z478 1369 aaKnown RBP29.07■■■□□ 2.24
VPS16-204ENST00000417508 NPATQ14207 1427 aa29.06■■■□□ 2.24
VPS16-204ENST00000417508 TSPY4P0CV99 314 aa29.05■■■□□ 2.24
VPS16-204ENST00000417508 TSPY10P0CW01 314 aa29.05■■■□□ 2.24
VPS16-204ENST00000417508 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
VPS16-204ENST00000417508 ARHGEF5Q12774 1597 aa29.01■■■□□ 2.24
VPS16-204ENST00000417508 APLP2Q06481 763 aa29.01■■■□□ 2.23
VPS16-204ENST00000417508 CLTCQ00610 1675 aaKnown RBP28.98■■■□□ 2.23
VPS16-204ENST00000417508 MIA2Q96PC5 1412 aa28.97■■■□□ 2.23
VPS16-204ENST00000417508 STRCQ7RTU9 1775 aa28.96■■■□□ 2.23
VPS16-204ENST00000417508 KIF3BO15066 747 aa28.95■■■□□ 2.22
VPS16-204ENST00000417508 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
VPS16-204ENST00000417508 CERKQ8TCT0 537 aa28.91■■■□□ 2.22
VPS16-204ENST00000417508 PTPRKQ15262 1439 aa28.91■■■□□ 2.22
VPS16-204ENST00000417508 PTPRTO14522 1441 aa28.9■■■□□ 2.22
VPS16-204ENST00000417508 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.21
VPS16-204ENST00000417508 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
VPS16-204ENST00000417508 MAST1Q9Y2H9 1570 aa28.85■■■□□ 2.21
VPS16-204ENST00000417508 WASHC2CQ9Y4E1 1318 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms