RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 ARHGAP5Q13017 1502 aa34.55■■■■□ 3.12
CKLF-205ENST00000417030 MTUS2Q5JR59 1369 aa34.54■■■■□ 3.12
CKLF-205ENST00000417030 RICTORQ6R327 1708 aa34.52■■■■□ 3.12
CKLF-205ENST00000417030 MAP3K1Q13233 1512 aa34.51■■■■□ 3.12
CKLF-205ENST00000417030 EHBP1L1Q8N3D4 1523 aa34.51■■■■□ 3.12
CKLF-205ENST00000417030 POGZQ7Z3K3 1410 aa34.46■■■■□ 3.11
CKLF-205ENST00000417030 CDC42BPBQ9Y5S2 1711 aa34.45■■■■□ 3.11
CKLF-205ENST00000417030 MAGI2Q86UL8 1455 aa34.45■■■■□ 3.1
CKLF-205ENST00000417030 ZMYM4Q5VZL5 1548 aa34.44■■■■□ 3.1
CKLF-205ENST00000417030 PREX2Q70Z35 1606 aa34.43■■■■□ 3.1
CKLF-205ENST00000417030 CDC42BPAQ5VT25 1732 aa34.4■■■■□ 3.1
CKLF-205ENST00000417030 LRRC9Q6ZRR7 1453 aa34.39■■■■□ 3.1
CKLF-205ENST00000417030 GPATCH8Q9UKJ3 1502 aaKnown RBP34.38■■■■□ 3.09
CKLF-205ENST00000417030 CCNB3Q8WWL7 1395 aa34.37■■■■□ 3.09
CKLF-205ENST00000417030 ARID4BQ4LE39 1312 aaPredicted RBP34.37■■■■□ 3.09
CKLF-205ENST00000417030 AFAP1Q8N556 730 aa34.37■■■■□ 3.09
CKLF-205ENST00000417030 ZNF518AQ6AHZ1 1483 aa34.37■■■■□ 3.09
CKLF-205ENST00000417030 ARHGEF40Q8TER5 1519 aa34.36■■■■□ 3.09
CKLF-205ENST00000417030 SUPT6HQ7KZ85 1726 aaKnown RBP34.36■■■■□ 3.09
CKLF-205ENST00000417030 APLP2Q06481 763 aa34.36■■■■□ 3.09
CKLF-205ENST00000417030 ZFYVE16Q7Z3T8 1539 aa34.35■■■■□ 3.09
CKLF-205ENST00000417030 CFDP1Q9UEE9 299 aaPredicted RBP34.34■■■■□ 3.09
CKLF-205ENST00000417030 ZNF777Q9ULD5 760 aaPredicted RBP34.34■■■■□ 3.09
CKLF-205ENST00000417030 YEATS2Q9ULM3 1422 aa34.32■■■■□ 3.08
CKLF-205ENST00000417030 KANK4Q5T7N3 995 aaPredicted RBP34.31■■■■□ 3.08
CKLF-205ENST00000417030 NCOA2Q15596 1464 aa34.28■■■■□ 3.08
CKLF-205ENST00000417030 MYT1LQ9UL68 1186 aa34.28■■■■□ 3.08
CKLF-205ENST00000417030 ABCC1P33527 1531 aa34.28■■■■□ 3.08
CKLF-205ENST00000417030 ARHGEF12Q9NZN5 1544 aa34.26■■■■□ 3.08
CKLF-205ENST00000417030 KDM5CP41229 1560 aa34.26■■■■□ 3.07
CKLF-205ENST00000417030 ITSN2Q9NZM3 1697 aa34.25■■■■□ 3.07
CKLF-205ENST00000417030 TRAPPC8Q9Y2L5 1435 aa34.24■■■■□ 3.07
CKLF-205ENST00000417030 ATP10AO60312 1499 aa34.24■■■■□ 3.07
CKLF-205ENST00000417030 PLEKHH2Q8IVE3 1493 aa34.21■■■■□ 3.07
CKLF-205ENST00000417030 KIAA1107Q9UPP5 1409 aa34.21■■■■□ 3.07
CKLF-205ENST00000417030 MLH3Q9UHC1 1453 aa34.2■■■■□ 3.07
CKLF-205ENST00000417030 SAMD9LQ8IVG5 1584 aa34.2■■■■□ 3.07
CKLF-205ENST00000417030 HNRNPMP52272 730 aaKnown RBP eCLIP34.2■■■■□ 3.07
CKLF-205ENST00000417030 ADAMTSL3P82987 1691 aa34.19■■■■□ 3.06
CKLF-205ENST00000417030 BCORL1Q5H9F3 1711 aa34.18■■■■□ 3.06
CKLF-205ENST00000417030 C9orf84Q5VXU9 1444 aa34.17■■■■□ 3.06
CKLF-205ENST00000417030 HECW2Q9P2P5 1572 aa34.16■■■■□ 3.06
CKLF-205ENST00000417030 SYCP2Q9BX26 1530 aa34.13■■■■□ 3.05
CKLF-205ENST00000417030 ZNF644Q9H582 1327 aaPredicted RBP34.1■■■■□ 3.05
CKLF-205ENST00000417030 SPAG9O60271 1321 aaKnown RBP34.09■■■■□ 3.05
CKLF-205ENST00000417030 MLECQ14165 292 aa34.08■■■■□ 3.05
CKLF-205ENST00000417030 PTPRMP28827 1452 aa34.07■■■■□ 3.05
CKLF-205ENST00000417030 SIGLEC1Q9BZZ2 1709 aa34.07■■■■□ 3.05
CKLF-205ENST00000417030 DIP2CQ9Y2E4 1556 aa34.06■■■■□ 3.04
CKLF-205ENST00000417030 MADDQ8WXG6 1647 aa34.04■■■■□ 3.04
CKLF-205ENST00000417030 MYOM3Q5VTT5 1437 aa34.04■■■■□ 3.04
CKLF-205ENST00000417030 REREQ9P2R6 1566 aa34.02■■■■□ 3.04
CKLF-205ENST00000417030 KIDINS220Q9ULH0 1771 aa34.02■■■■□ 3.04
CKLF-205ENST00000417030 ABCA6Q8N139 1617 aa34.01■■■■□ 3.04
CKLF-205ENST00000417030 RSPH4AQ5TD94 716 aa34■■■■□ 3.03
CKLF-205ENST00000417030 MBD5Q9P267 1494 aa34■■■■□ 3.03
CKLF-205ENST00000417030 MIA2Q96PC5 1412 aa33.98■■■■□ 3.03
CKLF-205ENST00000417030 CAMSAP2Q08AD1 1489 aa33.98■■■■□ 3.03
CKLF-205ENST00000417030 AGLP35573 1532 aa33.94■■■■□ 3.02
CKLF-205ENST00000417030 ATP7AQ04656 1500 aa33.94■■■■□ 3.02
CKLF-205ENST00000417030 RIMS1Q86UR5 1692 aaKnown RBP33.93■■■■□ 3.02
CKLF-205ENST00000417030 INO80Q9ULG1 1556 aaPredicted RBP33.89■■■■□ 3.02
CKLF-205ENST00000417030 RTEL1-TNFRSF6BF6WH68 1400 aa33.89■■■■□ 3.02
CKLF-205ENST00000417030 FER1L4A9Z1Z3 1794 aa33.87■■■■□ 3.01
CKLF-205ENST00000417030 CCDC141Q6ZP82 1450 aa33.86■■■■□ 3.01
CKLF-205ENST00000417030 FGD6Q6ZV73 1430 aa33.86■■■■□ 3.01
CKLF-205ENST00000417030 TSPY4P0CV99 314 aa33.85■■■■□ 3.01
CKLF-205ENST00000417030 TSPY10P0CW01 314 aa33.85■■■■□ 3.01
CKLF-205ENST00000417030 PTPN23Q9H3S7 1636 aa33.85■■■■□ 3.01
CKLF-205ENST00000417030 ARHGEF5Q12774 1597 aa33.85■■■■□ 3.01
CKLF-205ENST00000417030 ESF1Q9H501 851 aaKnown RBP33.84■■■■□ 3.01
CKLF-205ENST00000417030 PLPPR3Q6T4P5 718 aa33.83■■■■□ 3.01
CKLF-205ENST00000417030 A2MP01023 1474 aa33.82■■■■□ 3.01
CKLF-205ENST00000417030 PPARGC1BQ86YN6 1023 aaKnown RBP33.8■■■■□ 3
CKLF-205ENST00000417030 TCOF1Q13428 1488 aaKnown RBP33.79■■■■□ 3
CKLF-205ENST00000417030 ADGBQ8N7X0 1667 aa33.75■■■□□ 2.99
CKLF-205ENST00000417030 PLXNC1O60486 1568 aa33.74■■■□□ 2.99
CKLF-205ENST00000417030 DHX29Q7Z478 1369 aaKnown RBP33.73■■■□□ 2.99
CKLF-205ENST00000417030 CEBPAP49715 358 aaPredicted RBP33.73■■■□□ 2.99
CKLF-205ENST00000417030 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.99
CKLF-205ENST00000417030 PPP6R1Q9UPN7 881 aa33.69■■■□□ 2.98
CKLF-205ENST00000417030 GGT6Q6P531 493 aa33.68■■■□□ 2.98
CKLF-205ENST00000417030 DNMT1P26358 1616 aaKnown RBP33.66■■■□□ 2.98
CKLF-205ENST00000417030 MAST1Q9Y2H9 1570 aa33.66■■■□□ 2.98
CKLF-205ENST00000417030 CROCC2H7BZ55 1655 aa33.64■■■□□ 2.98
CKLF-205ENST00000417030 LMTK3Q96Q04 1460 aa33.63■■■□□ 2.97
CKLF-205ENST00000417030 ABCC5O15440 1437 aa33.62■■■□□ 2.97
CKLF-205ENST00000417030 KIF3BO15066 747 aa33.61■■■□□ 2.97
CKLF-205ENST00000417030 DAPK1P53355 1430 aa33.61■■■□□ 2.97
CKLF-205ENST00000417030 SHANK2Q9UPX8 1470 aa33.6■■■□□ 2.97
CKLF-205ENST00000417030 FAM50AQ14320 339 aaKnown RBP33.59■■■□□ 2.97
CKLF-205ENST00000417030 ZMYM3Q14202 1370 aa33.58■■■□□ 2.97
CKLF-205ENST00000417030 C3P01024 1663 aa33.56■■■□□ 2.96
CKLF-205ENST00000417030 SETD1BQ9UPS6 1966 aaKnown RBP33.54■■■□□ 2.96
CKLF-205ENST00000417030 MROH2AA6NES4 1674 aa33.53■■■□□ 2.96
CKLF-205ENST00000417030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.51■■■□□ 2.96
CKLF-205ENST00000417030 HSPA2P54652 639 aa33.51■■■□□ 2.95
CKLF-205ENST00000417030 RRBP1Q9P2E9 1410 aaKnown RBP33.5■■■□□ 2.95
CKLF-205ENST00000417030 PREX1Q8TCU6 1659 aa33.49■■■□□ 2.95
CKLF-205ENST00000417030 CLTCQ00610 1675 aaKnown RBP33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms