RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 AFAP1Q8N556 730 aa28.8■■■□□ 2.2
CPNE1-210ENST00000416778 ZMYM4Q5VZL5 1548 aa28.79■■■□□ 2.2
CPNE1-210ENST00000416778 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
CPNE1-210ENST00000416778 MYO5CQ9NQX4 1742 aa28.77■■■□□ 2.2
CPNE1-210ENST00000416778 ADAMTSL3P82987 1691 aa28.77■■■□□ 2.2
CPNE1-210ENST00000416778 ARHGAP5Q13017 1502 aa28.75■■■□□ 2.19
CPNE1-210ENST00000416778 ARHGEF40Q8TER5 1519 aa28.74■■■□□ 2.19
CPNE1-210ENST00000416778 ZFYVE16Q7Z3T8 1539 aa28.73■■■□□ 2.19
CPNE1-210ENST00000416778 PTPRMP28827 1452 aa28.72■■■□□ 2.19
CPNE1-210ENST00000416778 CEP162Q5TB80 1403 aa28.7■■■□□ 2.19
CPNE1-210ENST00000416778 BCORL1Q5H9F3 1711 aa28.69■■■□□ 2.18
CPNE1-210ENST00000416778 ATP10AO60312 1499 aa28.69■■■□□ 2.18
CPNE1-210ENST00000416778 CDC42BPBQ9Y5S2 1711 aa28.67■■■□□ 2.18
CPNE1-210ENST00000416778 ZNF518AQ6AHZ1 1483 aa28.66■■■□□ 2.18
CPNE1-210ENST00000416778 MLECQ14165 292 aa28.65■■■□□ 2.18
CPNE1-210ENST00000416778 ARHGEF12Q9NZN5 1544 aa28.64■■■□□ 2.18
CPNE1-210ENST00000416778 HECW2Q9P2P5 1572 aa28.64■■■□□ 2.18
CPNE1-210ENST00000416778 TRAPPC8Q9Y2L5 1435 aa28.63■■■□□ 2.17
CPNE1-210ENST00000416778 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
CPNE1-210ENST00000416778 ZNF777Q9ULD5 760 aaPredicted RBP28.63■■■□□ 2.17
CPNE1-210ENST00000416778 GPATCH8Q9UKJ3 1502 aaKnown RBP28.63■■■□□ 2.17
CPNE1-210ENST00000416778 SIGLEC1Q9BZZ2 1709 aa28.6■■■□□ 2.17
CPNE1-210ENST00000416778 MADDQ8WXG6 1647 aa28.6■■■□□ 2.17
CPNE1-210ENST00000416778 MTUS2Q5JR59 1369 aa28.6■■■□□ 2.17
CPNE1-210ENST00000416778 PREX2Q70Z35 1606 aa28.59■■■□□ 2.17
CPNE1-210ENST00000416778 C9orf84Q5VXU9 1444 aa28.59■■■□□ 2.17
CPNE1-210ENST00000416778 KDM5CP41229 1560 aa28.58■■■□□ 2.17
CPNE1-210ENST00000416778 CFDP1Q9UEE9 299 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-210ENST00000416778 MLH3Q9UHC1 1453 aa28.58■■■□□ 2.17
CPNE1-210ENST00000416778 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.161e-7■■■■□ 25.4
CPNE1-210ENST00000416778 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
CPNE1-210ENST00000416778 CDC42BPAQ5VT25 1732 aa28.55■■■□□ 2.16
CPNE1-210ENST00000416778 ABCC1P33527 1531 aa28.54■■■□□ 2.16
CPNE1-210ENST00000416778 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
CPNE1-210ENST00000416778 KIAA1107Q9UPP5 1409 aa28.49■■■□□ 2.15
CPNE1-210ENST00000416778 RIMS1Q86UR5 1692 aaKnown RBP28.48■■■□□ 2.15
CPNE1-210ENST00000416778 ZNF644Q9H582 1327 aaPredicted RBP28.46■■■□□ 2.15
CPNE1-210ENST00000416778 SAMD9LQ8IVG5 1584 aa28.45■■■□□ 2.15
CPNE1-210ENST00000416778 SPAG9O60271 1321 aaKnown RBP28.45■■■□□ 2.15
CPNE1-210ENST00000416778 DIP2CQ9Y2E4 1556 aa28.45■■■□□ 2.14
CPNE1-210ENST00000416778 ITSN2Q9NZM3 1697 aa28.45■■■□□ 2.14
CPNE1-210ENST00000416778 CEBPAP49715 358 aaPredicted RBP28.43■■■□□ 2.14
CPNE1-210ENST00000416778 PLEKHH2Q8IVE3 1493 aa28.41■■■□□ 2.14
CPNE1-210ENST00000416778 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
CPNE1-210ENST00000416778 EHBP1L1Q8N3D4 1523 aa28.39■■■□□ 2.14
CPNE1-210ENST00000416778 SYCP2Q9BX26 1530 aa28.39■■■□□ 2.14
CPNE1-210ENST00000416778 VPS8Q8N3P4 1428 aa28.39■■■□□ 2.14
CPNE1-210ENST00000416778 ABCA6Q8N139 1617 aa28.39■■■□□ 2.13
CPNE1-210ENST00000416778 LMTK3Q96Q04 1460 aa28.39■■■□□ 2.13
CPNE1-210ENST00000416778 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
CPNE1-210ENST00000416778 AGLP35573 1532 aa28.38■■■□□ 2.13
CPNE1-210ENST00000416778 HSPA2P54652 639 aa28.36■■■□□ 2.13
CPNE1-210ENST00000416778 TIAM1Q13009 1591 aa28.34■■■□□ 2.13
CPNE1-210ENST00000416778 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
CPNE1-210ENST00000416778 FER1L4A9Z1Z3 1794 aa28.33■■■□□ 2.13
CPNE1-210ENST00000416778 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-210ENST00000416778 NCOA2Q15596 1464 aa28.32■■■□□ 2.12
CPNE1-210ENST00000416778 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
CPNE1-210ENST00000416778 ILDR1Q86SU0 546 aaPredicted RBP28.3■■■□□ 2.12
CPNE1-210ENST00000416778 RSPH4AQ5TD94 716 aa28.28■■■□□ 2.12
CPNE1-210ENST00000416778 LRRC9Q6ZRR7 1453 aa28.27■■■□□ 2.12
CPNE1-210ENST00000416778 ATP7AQ04656 1500 aa28.25■■■□□ 2.11
CPNE1-210ENST00000416778 A2MP01023 1474 aa28.22■■■□□ 2.11
CPNE1-210ENST00000416778 RTEL1-TNFRSF6BF6WH68 1400 aa28.22■■■□□ 2.11
CPNE1-210ENST00000416778 MAP3K1Q13233 1512 aa28.22■■■□□ 2.11
CPNE1-210ENST00000416778 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
CPNE1-210ENST00000416778 INO80Q9ULG1 1556 aaPredicted RBP28.2■■■□□ 2.1
CPNE1-210ENST00000416778 GGT6Q6P531 493 aa28.19■■■□□ 2.1
CPNE1-210ENST00000416778 CNTLNQ9NXG0 1405 aa28.18■■■□□ 2.1
CPNE1-210ENST00000416778 ZMYM3Q14202 1370 aa28.17■■■□□ 2.1
CPNE1-210ENST00000416778 PPP6R1Q9UPN7 881 aa28.17■■■□□ 2.1
CPNE1-210ENST00000416778 DHX29Q7Z478 1369 aaKnown RBP28.16■■■□□ 2.1
CPNE1-210ENST00000416778 SETD1BQ9UPS6 1966 aaKnown RBP28.16■■■□□ 2.1
CPNE1-210ENST00000416778 CAMSAP2Q08AD1 1489 aa28.15■■■□□ 2.1
CPNE1-210ENST00000416778 TSPY4P0CV99 314 aa28.14■■■□□ 2.1
CPNE1-210ENST00000416778 TSPY10P0CW01 314 aa28.14■■■□□ 2.1
CPNE1-210ENST00000416778 PLXNC1O60486 1568 aa28.13■■■□□ 2.09
CPNE1-210ENST00000416778 APLP2Q06481 763 aa28.12■■■□□ 2.09
CPNE1-210ENST00000416778 CCDC141Q6ZP82 1450 aa28.11■■■□□ 2.09
CPNE1-210ENST00000416778 UHRF1BP1Q6BDS2 1440 aa28.1■■■□□ 2.09
CPNE1-210ENST00000416778 C3P01024 1663 aa28.1■■■□□ 2.09
CPNE1-210ENST00000416778 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
CPNE1-210ENST00000416778 KIF3BO15066 747 aa28.07■■■□□ 2.08
CPNE1-210ENST00000416778 MIA2Q96PC5 1412 aa28.06■■■□□ 2.08
CPNE1-210ENST00000416778 ADGBQ8N7X0 1667 aa28.04■■■□□ 2.08
CPNE1-210ENST00000416778 MYOM3Q5VTT5 1437 aa28.04■■■□□ 2.08
CPNE1-210ENST00000416778 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
CPNE1-210ENST00000416778 NPATQ14207 1427 aa28.03■■■□□ 2.08
CPNE1-210ENST00000416778 DMRT2Q9Y5R5 561 aa28.03■■■□□ 2.08
CPNE1-210ENST00000416778 FBXO41Q8TF61 875 aa28.01■■■□□ 2.07
CPNE1-210ENST00000416778 MROH2AA6NES4 1674 aa27.98■■■□□ 2.07
CPNE1-210ENST00000416778 PTPRKQ15262 1439 aa27.98■■■□□ 2.07
CPNE1-210ENST00000416778 CLTCQ00610 1675 aaKnown RBP27.95■■■□□ 2.07
CPNE1-210ENST00000416778 WASHC2CQ9Y4E1 1318 aa27.93■■■□□ 2.06
CPNE1-210ENST00000416778 STRCQ7RTU9 1775 aa27.92■■■□□ 2.06
CPNE1-210ENST00000416778 FBXO31Q5XUX0 539 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-210ENST00000416778 CERKQ8TCT0 537 aa27.91■■■□□ 2.06
CPNE1-210ENST00000416778 MAST1Q9Y2H9 1570 aa27.88■■■□□ 2.05
CPNE1-210ENST00000416778 ABCC5O15440 1437 aa27.87■■■□□ 2.05
CPNE1-210ENST00000416778 PTPRTO14522 1441 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms