RNA–Protein interactions for RNA: ENST00000416526.5

HMG20B-203, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-203ENST00000416526 ARHGAP5Q13017 1502 aa35.15■■■■□ 3.22
HMG20B-203ENST00000416526 ZMYM4Q5VZL5 1548 aa35.12■■■■□ 3.21
HMG20B-203ENST00000416526 PREX2Q70Z35 1606 aa35.11■■■■□ 3.21
HMG20B-203ENST00000416526 POGZQ7Z3K3 1410 aa35.11■■■■□ 3.21
HMG20B-203ENST00000416526 ARHGEF40Q8TER5 1519 aa35.1■■■■□ 3.21
HMG20B-203ENST00000416526 CDC42BPAQ5VT25 1732 aa35.07■■■■□ 3.2
HMG20B-203ENST00000416526 YEATS2Q9ULM3 1422 aa35.03■■■■□ 3.2
HMG20B-203ENST00000416526 ZFYVE16Q7Z3T8 1539 aa35.01■■■■□ 3.2
HMG20B-203ENST00000416526 MTUS2Q5JR59 1369 aa35.01■■■■□ 3.2
HMG20B-203ENST00000416526 MAGI2Q86UL8 1455 aa35.01■■■■□ 3.19
HMG20B-203ENST00000416526 GPATCH8Q9UKJ3 1502 aaKnown RBP35■■■■□ 3.19
HMG20B-203ENST00000416526 VPS8Q8N3P4 1428 aa34.98■■■■□ 3.19
HMG20B-203ENST00000416526 ZNF518AQ6AHZ1 1483 aa34.96■■■■□ 3.19
HMG20B-203ENST00000416526 ABCC1P33527 1531 aa34.96■■■■□ 3.19
HMG20B-203ENST00000416526 ARHGEF12Q9NZN5 1544 aa34.96■■■■□ 3.19
HMG20B-203ENST00000416526 AFAP1Q8N556 730 aa34.95■■■■□ 3.19
HMG20B-203ENST00000416526 EHBP1L1Q8N3D4 1523 aa34.95■■■■□ 3.19
HMG20B-203ENST00000416526 KDM5CP41229 1560 aa34.94■■■■□ 3.18
HMG20B-203ENST00000416526 ADAMTSL3P82987 1691 aa34.93■■■■□ 3.18
HMG20B-203ENST00000416526 SIGLEC1Q9BZZ2 1709 aa34.92■■■■□ 3.18
HMG20B-203ENST00000416526 ARID4BQ4LE39 1312 aaPredicted RBP34.92■■■■□ 3.18
HMG20B-203ENST00000416526 BCORL1Q5H9F3 1711 aa34.92■■■■□ 3.18
HMG20B-203ENST00000416526 ITSN2Q9NZM3 1697 aa34.91■■■■□ 3.18
HMG20B-203ENST00000416526 TRAPPC8Q9Y2L5 1435 aa34.89■■■■□ 3.18
HMG20B-203ENST00000416526 SAMD9LQ8IVG5 1584 aa34.89■■■■□ 3.18
HMG20B-203ENST00000416526 CCNB3Q8WWL7 1395 aa34.88■■■■□ 3.17
HMG20B-203ENST00000416526 TIAM1Q13009 1591 aa34.87■■■■□ 3.17
HMG20B-203ENST00000416526 ZNF777Q9ULD5 760 aaPredicted RBP34.86■■■■□ 3.17
HMG20B-203ENST00000416526 ATP10AO60312 1499 aa34.84■■■■□ 3.17
HMG20B-203ENST00000416526 HECW2Q9P2P5 1572 aa34.83■■■■□ 3.17
HMG20B-203ENST00000416526 CFDP1Q9UEE9 299 aaPredicted RBP34.82■■■■□ 3.16
HMG20B-203ENST00000416526 MADDQ8WXG6 1647 aa34.81■■■■□ 3.16
HMG20B-203ENST00000416526 MLH3Q9UHC1 1453 aa34.8■■■■□ 3.16
HMG20B-203ENST00000416526 SYCP2Q9BX26 1530 aa34.79■■■■□ 3.16
HMG20B-203ENST00000416526 C9orf84Q5VXU9 1444 aa34.79■■■■□ 3.16
HMG20B-203ENST00000416526 DIP2CQ9Y2E4 1556 aa34.77■■■■□ 3.16
HMG20B-203ENST00000416526 PTPRMP28827 1452 aa34.77■■■■□ 3.16
HMG20B-203ENST00000416526 NCOA2Q15596 1464 aa34.76■■■■□ 3.15
HMG20B-203ENST00000416526 SUPT6HQ7KZ85 1726 aaKnown RBP34.75■■■■□ 3.15
HMG20B-203ENST00000416526 ABCA6Q8N139 1617 aa34.74■■■■□ 3.15
HMG20B-203ENST00000416526 HNRNPMP52272 730 aaKnown RBP eCLIP34.74■■■■□ 3.15
HMG20B-203ENST00000416526 KIAA1107Q9UPP5 1409 aa34.73■■■■□ 3.15
HMG20B-203ENST00000416526 LRRC9Q6ZRR7 1453 aa34.73■■■■□ 3.15
HMG20B-203ENST00000416526 MYT1LQ9UL68 1186 aa34.73■■■■□ 3.15
HMG20B-203ENST00000416526 KIDINS220Q9ULH0 1771 aa34.72■■■■□ 3.15
HMG20B-203ENST00000416526 PLEKHH2Q8IVE3 1493 aa34.71■■■■□ 3.15
HMG20B-203ENST00000416526 MAP3K1Q13233 1512 aa34.71■■■■□ 3.15
HMG20B-203ENST00000416526 ZNF644Q9H582 1327 aaPredicted RBP34.7■■■■□ 3.15
HMG20B-203ENST00000416526 RIMS1Q86UR5 1692 aaKnown RBP34.69■■■■□ 3.14
HMG20B-203ENST00000416526 MLECQ14165 292 aa34.68■■■■□ 3.14
HMG20B-203ENST00000416526 REREQ9P2R6 1566 aa34.67■■■■□ 3.14
HMG20B-203ENST00000416526 KANK4Q5T7N3 995 aaPredicted RBP34.67■■■■□ 3.14
HMG20B-203ENST00000416526 SPAG9O60271 1321 aaKnown RBP34.61■■■■□ 3.13
HMG20B-203ENST00000416526 MBD5Q9P267 1494 aa34.61■■■■□ 3.13
HMG20B-203ENST00000416526 FER1L4A9Z1Z3 1794 aa34.59■■■■□ 3.13
HMG20B-203ENST00000416526 INO80Q9ULG1 1556 aaPredicted RBP34.58■■■■□ 3.13
HMG20B-203ENST00000416526 ATP7AQ04656 1500 aa34.57■■■■□ 3.12
HMG20B-203ENST00000416526 AGLP35573 1532 aa34.55■■■■□ 3.12
HMG20B-203ENST00000416526 CAMSAP2Q08AD1 1489 aa34.54■■■■□ 3.12
HMG20B-203ENST00000416526 APLP2Q06481 763 aa34.46■■■■□ 3.11
HMG20B-203ENST00000416526 PLPPR3Q6T4P5 718 aa34.46■■■■□ 3.11
HMG20B-203ENST00000416526 CCDC141Q6ZP82 1450 aa34.44■■■■□ 3.1
HMG20B-203ENST00000416526 MYOM3Q5VTT5 1437 aa34.43■■■■□ 3.1
HMG20B-203ENST00000416526 PLXNC1O60486 1568 aa34.43■■■■□ 3.1
HMG20B-203ENST00000416526 A2MP01023 1474 aa34.42■■■■□ 3.1
HMG20B-203ENST00000416526 RTEL1-TNFRSF6BF6WH68 1400 aa34.41■■■■□ 3.1
HMG20B-203ENST00000416526 ARHGEF5Q12774 1597 aa34.4■■■■□ 3.1
HMG20B-203ENST00000416526 ADGBQ8N7X0 1667 aa34.38■■■■□ 3.09
HMG20B-203ENST00000416526 MIA2Q96PC5 1412 aa34.38■■■■□ 3.09
HMG20B-203ENST00000416526 RSPH4AQ5TD94 716 aa34.37■■■■□ 3.09
HMG20B-203ENST00000416526 LMTK3Q96Q04 1460 aa34.37■■■■□ 3.09
HMG20B-203ENST00000416526 CEBPAP49715 358 aaPredicted RBP34.36■■■■□ 3.09
HMG20B-203ENST00000416526 C3P01024 1663 aa34.28■■■■□ 3.08
HMG20B-203ENST00000416526 DHX29Q7Z478 1369 aaKnown RBP34.26■■■■□ 3.08
HMG20B-203ENST00000416526 ESF1Q9H501 851 aaKnown RBP34.26■■■■□ 3.08
HMG20B-203ENST00000416526 CNTLNQ9NXG0 1405 aa34.24■■■■□ 3.07
HMG20B-203ENST00000416526 TSPY4P0CV99 314 aa34.24■■■■□ 3.07
HMG20B-203ENST00000416526 TSPY10P0CW01 314 aa34.24■■■■□ 3.07
HMG20B-203ENST00000416526 MAST1Q9Y2H9 1570 aa34.22■■■■□ 3.07
HMG20B-203ENST00000416526 PTPN23Q9H3S7 1636 aa34.22■■■■□ 3.07
HMG20B-203ENST00000416526 GGT6Q6P531 493 aa34.2■■■■□ 3.07
HMG20B-203ENST00000416526 PREX1Q8TCU6 1659 aa34.19■■■■□ 3.06
HMG20B-203ENST00000416526 HSPA2P54652 639 aa34.19■■■■□ 3.06
HMG20B-203ENST00000416526 FGD6Q6ZV73 1430 aa34.19■■■■□ 3.06
HMG20B-203ENST00000416526 MROH2AA6NES4 1674 aa34.19■■■■□ 3.06
HMG20B-203ENST00000416526 CLTCQ00610 1675 aaKnown RBP34.18■■■■□ 3.06
HMG20B-203ENST00000416526 SETD1BQ9UPS6 1966 aaKnown RBP34.14■■■■□ 3.06
HMG20B-203ENST00000416526 TCOF1Q13428 1488 aaKnown RBP34.14■■■■□ 3.06
HMG20B-203ENST00000416526 ZMYM3Q14202 1370 aa34.14■■■■□ 3.06
HMG20B-203ENST00000416526 ABCC5O15440 1437 aa34.12■■■■□ 3.05
HMG20B-203ENST00000416526 KIF3BO15066 747 aa34.11■■■■□ 3.05
HMG20B-203ENST00000416526 PPP6R1Q9UPN7 881 aa34.1■■■■□ 3.05
HMG20B-203ENST00000416526 CROCC2H7BZ55 1655 aa34.09■■■■□ 3.05
HMG20B-203ENST00000416526 DNMT1P26358 1616 aaKnown RBP34.07■■■■□ 3.04
HMG20B-203ENST00000416526 UHRF1BP1Q6BDS2 1440 aa34.06■■■■□ 3.04
HMG20B-203ENST00000416526 SHANK2Q9UPX8 1470 aa34.06■■■■□ 3.04
HMG20B-203ENST00000416526 DAPK1P53355 1430 aa34.05■■■■□ 3.04
HMG20B-203ENST00000416526 NPATQ14207 1427 aa34.04■■■■□ 3.04
HMG20B-203ENST00000416526 PTPRKQ15262 1439 aa34■■■■□ 3.03
HMG20B-203ENST00000416526 RNF17Q9BXT8 1623 aaKnown RBP33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms