RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
UBA3-203ENST00000415609 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
UBA3-203ENST00000415609 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
UBA3-203ENST00000415609 DENND4BO75064 1496 aaPredicted RBP17.6■□□□□ 0.41
UBA3-203ENST00000415609 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
UBA3-203ENST00000415609 KIF14Q15058 1648 aa17.59■□□□□ 0.41
UBA3-203ENST00000415609 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
UBA3-203ENST00000415609 MPHOSPH9Q99550 1183 aa17.57■□□□□ 0.4
UBA3-203ENST00000415609 KDM5BQ9UGL1 1544 aa17.57■□□□□ 0.4
UBA3-203ENST00000415609 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
UBA3-203ENST00000415609 ABCA8O94911 1581 aa17.55■□□□□ 0.4
UBA3-203ENST00000415609 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
UBA3-203ENST00000415609 ADGBQ8N7X0 1667 aa17.52■□□□□ 0.39
UBA3-203ENST00000415609 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
UBA3-203ENST00000415609 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
UBA3-203ENST00000415609 FOXD1Q16676 465 aa17.5■□□□□ 0.39
UBA3-203ENST00000415609 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
UBA3-203ENST00000415609 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
UBA3-203ENST00000415609 ATP10BO94823 1461 aa17.48■□□□□ 0.39
UBA3-203ENST00000415609 CHD1O14646 1710 aa17.47■□□□□ 0.39
UBA3-203ENST00000415609 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
UBA3-203ENST00000415609 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
UBA3-203ENST00000415609 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
UBA3-203ENST00000415609 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
UBA3-203ENST00000415609 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
UBA3-203ENST00000415609 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
UBA3-203ENST00000415609 PTPRGP23470 1445 aa17.44■□□□□ 0.38
UBA3-203ENST00000415609 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
UBA3-203ENST00000415609 ANP32CO43423 234 aa17.43■□□□□ 0.38
UBA3-203ENST00000415609 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
UBA3-203ENST00000415609 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
UBA3-203ENST00000415609 ANKRD30AQ9BXX3 1397 aa17.42■□□□□ 0.38
UBA3-203ENST00000415609 PZPP20742 1482 aa17.41■□□□□ 0.38
UBA3-203ENST00000415609 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
UBA3-203ENST00000415609 TEX14Q8IWB6 1497 aa17.38■□□□□ 0.37
UBA3-203ENST00000415609 SHANK2Q9UPX8 1470 aa17.38■□□□□ 0.37
UBA3-203ENST00000415609 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
UBA3-203ENST00000415609 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
UBA3-203ENST00000415609 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
UBA3-203ENST00000415609 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
UBA3-203ENST00000415609 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
UBA3-203ENST00000415609 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
UBA3-203ENST00000415609 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
UBA3-203ENST00000415609 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
UBA3-203ENST00000415609 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
UBA3-203ENST00000415609 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
UBA3-203ENST00000415609 ARHGEF5Q12774 1597 aa17.31■□□□□ 0.36
UBA3-203ENST00000415609 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
UBA3-203ENST00000415609 PKD2Q13563 968 aa17.3■□□□□ 0.36
UBA3-203ENST00000415609 CDC42BPBQ9Y5S2 1711 aa17.3■□□□□ 0.36
UBA3-203ENST00000415609 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
UBA3-203ENST00000415609 HNRNPMP52272 730 aaKnown RBP eCLIP17.29■□□□□ 0.362e-8■■□□□ 13
UBA3-203ENST00000415609 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
UBA3-203ENST00000415609 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
UBA3-203ENST00000415609 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
UBA3-203ENST00000415609 NUP155O75694 1391 aa17.27■□□□□ 0.36
UBA3-203ENST00000415609 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
UBA3-203ENST00000415609 MBD5Q9P267 1494 aa17.27■□□□□ 0.36
UBA3-203ENST00000415609 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
UBA3-203ENST00000415609 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
UBA3-203ENST00000415609 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
UBA3-203ENST00000415609 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
UBA3-203ENST00000415609 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
UBA3-203ENST00000415609 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
UBA3-203ENST00000415609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBA3-203ENST00000415609 SYCP2Q9BX26 1530 aa17.22■□□□□ 0.35
UBA3-203ENST00000415609 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
UBA3-203ENST00000415609 MYO5CQ9NQX4 1742 aa17.21■□□□□ 0.34
UBA3-203ENST00000415609 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
UBA3-203ENST00000415609 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
UBA3-203ENST00000415609 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
UBA3-203ENST00000415609 POLR1AO95602 1720 aaPredicted RBP17.2■□□□□ 0.34
UBA3-203ENST00000415609 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
UBA3-203ENST00000415609 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
UBA3-203ENST00000415609 KIF7Q2M1P5 1343 aa17.16■□□□□ 0.34
UBA3-203ENST00000415609 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
UBA3-203ENST00000415609 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
UBA3-203ENST00000415609 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
UBA3-203ENST00000415609 ARHGEF12Q9NZN5 1544 aa17.15■□□□□ 0.34
UBA3-203ENST00000415609 USP47Q96K76 1375 aa17.14■□□□□ 0.33
UBA3-203ENST00000415609 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
UBA3-203ENST00000415609 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
UBA3-203ENST00000415609 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
UBA3-203ENST00000415609 KDM5CP41229 1560 aa17.12■□□□□ 0.33
UBA3-203ENST00000415609 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
UBA3-203ENST00000415609 UNC13BO14795 1591 aa17.11■□□□□ 0.33
UBA3-203ENST00000415609 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
UBA3-203ENST00000415609 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
UBA3-203ENST00000415609 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.33
UBA3-203ENST00000415609 PLCH2O75038 1416 aa17.08■□□□□ 0.32
UBA3-203ENST00000415609 FKBP8Q14318 412 aa17.08■□□□□ 0.32
UBA3-203ENST00000415609 NEFLP07196 543 aa17.07■□□□□ 0.32
UBA3-203ENST00000415609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBA3-203ENST00000415609 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
UBA3-203ENST00000415609 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
UBA3-203ENST00000415609 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
UBA3-203ENST00000415609 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
UBA3-203ENST00000415609 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
UBA3-203ENST00000415609 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
UBA3-203ENST00000415609 ABCC1P33527 1531 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms