RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 POGZQ7Z3K3 1410 aa32.47■■■□□ 2.79
CTTN-205ENST00000415461 EFCAB2Q5VUJ9 269 aa32.46■■■□□ 2.79
CTTN-205ENST00000415461 YEATS2Q9ULM3 1422 aa32.4■■■□□ 2.78
CTTN-205ENST00000415461 ZFYVE16Q7Z3T8 1539 aa32.39■■■□□ 2.78
CTTN-205ENST00000415461 LOC105371045A0A1W2PR82 267 aa32.38■■■□□ 2.77
CTTN-205ENST00000415461 PREX2Q70Z35 1606 aa32.37■■■□□ 2.77
CTTN-205ENST00000415461 MAGI2Q86UL8 1455 aa32.35■■■□□ 2.77
CTTN-205ENST00000415461 CDC42BPBQ9Y5S2 1711 aa32.35■■■□□ 2.77
CTTN-205ENST00000415461 ARID4BQ4LE39 1312 aaPredicted RBP32.35■■■□□ 2.77
CTTN-205ENST00000415461 ADAMTSL3P82987 1691 aa32.31■■■□□ 2.76
CTTN-205ENST00000415461 ZNF518AQ6AHZ1 1483 aa32.3■■■□□ 2.76
CTTN-205ENST00000415461 BCORL1Q5H9F3 1711 aa32.3■■■□□ 2.76
CTTN-205ENST00000415461 CDC42BPAQ5VT25 1732 aa32.28■■■□□ 2.76
CTTN-205ENST00000415461 ABCC1P33527 1531 aa32.27■■■□□ 2.76
CTTN-205ENST00000415461 MTUS2Q5JR59 1369 aa32.27■■■□□ 2.76
CTTN-205ENST00000415461 KDM5CP41229 1560 aa32.27■■■□□ 2.76
CTTN-205ENST00000415461 AFAP1Q8N556 730 aa32.26■■■□□ 2.75
CTTN-205ENST00000415461 SIGLEC1Q9BZZ2 1709 aa32.26■■■□□ 2.75
CTTN-205ENST00000415461 MADDQ8WXG6 1647 aa32.24■■■□□ 2.75
CTTN-205ENST00000415461 ARHGEF12Q9NZN5 1544 aa32.24■■■□□ 2.75
CTTN-205ENST00000415461 GPATCH8Q9UKJ3 1502 aaKnown RBP32.24■■■□□ 2.75
CTTN-205ENST00000415461 PTPRMP28827 1452 aa32.23■■■□□ 2.75
CTTN-205ENST00000415461 TRAPPC8Q9Y2L5 1435 aa32.2■■■□□ 2.75
CTTN-205ENST00000415461 EHBP1L1Q8N3D4 1523 aa32.2■■■□□ 2.74
CTTN-205ENST00000415461 ITSN2Q9NZM3 1697 aa32.19■■■□□ 2.74
CTTN-205ENST00000415461 ATP10AO60312 1499 aa32.19■■■□□ 2.74
CTTN-205ENST00000415461 HECW2Q9P2P5 1572 aa32.19■■■□□ 2.74
CTTN-205ENST00000415461 C9orf84Q5VXU9 1444 aa32.18■■■□□ 2.74
CTTN-205ENST00000415461 CCNB3Q8WWL7 1395 aa32.17■■■□□ 2.74
CTTN-205ENST00000415461 SAMD9LQ8IVG5 1584 aa32.16■■■□□ 2.74
CTTN-205ENST00000415461 ZNF777Q9ULD5 760 aaPredicted RBP32.16■■■□□ 2.74
CTTN-205ENST00000415461 VPS8Q8N3P4 1428 aa32.15■■■□□ 2.74
CTTN-205ENST00000415461 MYT1LQ9UL68 1186 aa32.13■■■□□ 2.73
CTTN-205ENST00000415461 DIP2CQ9Y2E4 1556 aa32.12■■■□□ 2.73
CTTN-205ENST00000415461 SYCP2Q9BX26 1530 aa32.12■■■□□ 2.73
CTTN-205ENST00000415461 MLH3Q9UHC1 1453 aa32.12■■■□□ 2.73
CTTN-205ENST00000415461 RIMS1Q86UR5 1692 aaKnown RBP32.11■■■□□ 2.73
CTTN-205ENST00000415461 MLECQ14165 292 aa32.1■■■□□ 2.73
CTTN-205ENST00000415461 CFDP1Q9UEE9 299 aaPredicted RBP32.1■■■□□ 2.73
CTTN-205ENST00000415461 TIAM1Q13009 1591 aa32.1■■■□□ 2.73
CTTN-205ENST00000415461 ABCA6Q8N139 1617 aa32.09■■■□□ 2.73
CTTN-205ENST00000415461 PLEKHH2Q8IVE3 1493 aa32.03■■■□□ 2.72
CTTN-205ENST00000415461 KIAA1107Q9UPP5 1409 aa32.02■■■□□ 2.72
CTTN-205ENST00000415461 HNRNPMP52272 730 aaKnown RBP eCLIP32.02■■■□□ 2.721e-6■■□□□ 11.4
CTTN-205ENST00000415461 REREQ9P2R6 1566 aa32.02■■■□□ 2.72
CTTN-205ENST00000415461 KIDINS220Q9ULH0 1771 aa32■■■□□ 2.71
CTTN-205ENST00000415461 NCOA2Q15596 1464 aa32■■■□□ 2.71
CTTN-205ENST00000415461 FER1L4A9Z1Z3 1794 aa31.98■■■□□ 2.71
CTTN-205ENST00000415461 SUPT6HQ7KZ85 1726 aaKnown RBP31.97■■■□□ 2.71
CTTN-205ENST00000415461 ZNF644Q9H582 1327 aaPredicted RBP31.97■■■□□ 2.71
CTTN-205ENST00000415461 PLPPR3Q6T4P5 718 aa31.96■■■□□ 2.71
CTTN-205ENST00000415461 SPAG9O60271 1321 aaKnown RBP31.96■■■□□ 2.71
CTTN-205ENST00000415461 LRRC9Q6ZRR7 1453 aa31.94■■■□□ 2.7
CTTN-205ENST00000415461 AGLP35573 1532 aa31.91■■■□□ 2.7
CTTN-205ENST00000415461 ATP7AQ04656 1500 aa31.91■■■□□ 2.7
CTTN-205ENST00000415461 INO80Q9ULG1 1556 aaPredicted RBP31.9■■■□□ 2.7
CTTN-205ENST00000415461 MBD5Q9P267 1494 aa31.89■■■□□ 2.7
CTTN-205ENST00000415461 MAP3K1Q13233 1512 aa31.88■■■□□ 2.69
CTTN-205ENST00000415461 LMTK3Q96Q04 1460 aa31.87■■■□□ 2.69
CTTN-205ENST00000415461 KANK4Q5T7N3 995 aaPredicted RBP31.85■■■□□ 2.69
CTTN-205ENST00000415461 CAMSAP2Q08AD1 1489 aa31.84■■■□□ 2.69
CTTN-205ENST00000415461 CEBPAP49715 358 aaPredicted RBP31.79■■■□□ 2.68
CTTN-205ENST00000415461 PLXNC1O60486 1568 aa31.78■■■□□ 2.68
CTTN-205ENST00000415461 A2MP01023 1474 aa31.78■■■□□ 2.68
CTTN-205ENST00000415461 CCDC141Q6ZP82 1450 aa31.77■■■□□ 2.68
CTTN-205ENST00000415461 RTEL1-TNFRSF6BF6WH68 1400 aa31.72■■■□□ 2.67
CTTN-205ENST00000415461 HSPA2P54652 639 aa31.71■■■□□ 2.67
CTTN-205ENST00000415461 ESF1Q9H501 851 aaKnown RBP31.71■■■□□ 2.67
CTTN-205ENST00000415461 MYOM3Q5VTT5 1437 aa31.69■■■□□ 2.66
CTTN-205ENST00000415461 ADGBQ8N7X0 1667 aa31.68■■■□□ 2.66
CTTN-205ENST00000415461 APLP2Q06481 763 aa31.68■■■□□ 2.66
CTTN-205ENST00000415461 ARHGEF5Q12774 1597 aa31.68■■■□□ 2.66
CTTN-205ENST00000415461 CNTLNQ9NXG0 1405 aa31.67■■■□□ 2.66
CTTN-205ENST00000415461 C3P01024 1663 aa31.66■■■□□ 2.66
CTTN-205ENST00000415461 RSPH4AQ5TD94 716 aa31.64■■■□□ 2.66
CTTN-205ENST00000415461 MIA2Q96PC5 1412 aa31.63■■■□□ 2.65
CTTN-205ENST00000415461 PREX1Q8TCU6 1659 aa31.63■■■□□ 2.65
CTTN-205ENST00000415461 DHX29Q7Z478 1369 aaKnown RBP31.61■■■□□ 2.65
CTTN-205ENST00000415461 GGT6Q6P531 493 aa31.59■■■□□ 2.65
CTTN-205ENST00000415461 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
CTTN-205ENST00000415461 MROH2AA6NES4 1674 aa31.56■■■□□ 2.64
CTTN-205ENST00000415461 TSPY4P0CV99 314 aa31.55■■■□□ 2.64
CTTN-205ENST00000415461 TSPY10P0CW01 314 aa31.55■■■□□ 2.64
CTTN-205ENST00000415461 CLTCQ00610 1675 aaKnown RBP31.54■■■□□ 2.64
CTTN-205ENST00000415461 ZMYM3Q14202 1370 aa31.54■■■□□ 2.64
CTTN-205ENST00000415461 MAST1Q9Y2H9 1570 aa31.51■■■□□ 2.64
CTTN-205ENST00000415461 KIF3BO15066 747 aa31.48■■■□□ 2.63
CTTN-205ENST00000415461 PTPN23Q9H3S7 1636 aa31.47■■■□□ 2.63
CTTN-205ENST00000415461 NPATQ14207 1427 aa31.47■■■□□ 2.63
CTTN-205ENST00000415461 PPP6R1Q9UPN7 881 aa31.46■■■□□ 2.63
CTTN-205ENST00000415461 FGD6Q6ZV73 1430 aa31.46■■■□□ 2.63
CTTN-205ENST00000415461 SETD1BQ9UPS6 1966 aaKnown RBP31.45■■■□□ 2.63
CTTN-205ENST00000415461 PTPRKQ15262 1439 aa31.42■■■□□ 2.62
CTTN-205ENST00000415461 ILDR1Q86SU0 546 aaPredicted RBP31.41■■■□□ 2.62
CTTN-205ENST00000415461 TCOF1Q13428 1488 aaKnown RBP31.4■■■□□ 2.62
CTTN-205ENST00000415461 ABCC5O15440 1437 aa31.4■■■□□ 2.62
CTTN-205ENST00000415461 KDM5DQ9BY66 1539 aa31.39■■■□□ 2.62
CTTN-205ENST00000415461 SHANK2Q9UPX8 1470 aa31.39■■■□□ 2.62
CTTN-205ENST00000415461 CROCC2H7BZ55 1655 aa31.37■■■□□ 2.61
CTTN-205ENST00000415461 FAM135AQ9P2D6 1515 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms