RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 DAPK1P53355 1430 aa24.92■■□□□ 1.58
SCARB1-203ENST00000415380 IRX6P78412 446 aaPredicted RBP24.91■■□□□ 1.58
SCARB1-203ENST00000415380 ROCK1Q13464 1354 aa24.91■■□□□ 1.58
SCARB1-203ENST00000415380 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
SCARB1-203ENST00000415380 RPRD2Q5VT52 1461 aaKnown RBP24.9■■□□□ 1.58
SCARB1-203ENST00000415380 NBPF8Q3BBV2 869 aa24.88■■□□□ 1.57
SCARB1-203ENST00000415380 PRKRIP1Q9H875 184 aaPredicted RBP24.87■■□□□ 1.57
SCARB1-203ENST00000415380 ABCC5O15440 1437 aa24.87■■□□□ 1.57
SCARB1-203ENST00000415380 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
SCARB1-203ENST00000415380 DNMT1P26358 1616 aaKnown RBP24.87■■□□□ 1.57
SCARB1-203ENST00000415380 ZNF644Q9H582 1327 aaPredicted RBP24.83■■□□□ 1.56
SCARB1-203ENST00000415380 SPATA31E1Q6ZUB1 1445 aa24.8■■□□□ 1.56
SCARB1-203ENST00000415380 KIAA0556O60303 1618 aa24.8■■□□□ 1.56
SCARB1-203ENST00000415380 FAM9BQ8IZU0 186 aa24.8■■□□□ 1.56
SCARB1-203ENST00000415380 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
SCARB1-203ENST00000415380 DISP1Q96F81 1524 aa24.79■■□□□ 1.56
SCARB1-203ENST00000415380 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
SCARB1-203ENST00000415380 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
SCARB1-203ENST00000415380 MRS2Q9HD23 443 aa24.79■■□□□ 1.56
SCARB1-203ENST00000415380 CDK11AQ9UQ88 783 aaPredicted RBP24.79■■□□□ 1.56
SCARB1-203ENST00000415380 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
SCARB1-203ENST00000415380 KIF7Q2M1P5 1343 aa24.78■■□□□ 1.56
SCARB1-203ENST00000415380 KIAA0586Q9BVV6 1533 aa24.76■■□□□ 1.55
SCARB1-203ENST00000415380 POLR1AO95602 1720 aaPredicted RBP24.75■■□□□ 1.55
SCARB1-203ENST00000415380 RAPGEF6Q8TEU7 1601 aa24.74■■□□□ 1.55
SCARB1-203ENST00000415380 ZBED9Q6R2W3 1325 aa24.74■■□□□ 1.55
SCARB1-203ENST00000415380 MSH5O43196 834 aa24.74■■□□□ 1.55
SCARB1-203ENST00000415380 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
SCARB1-203ENST00000415380 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
SCARB1-203ENST00000415380 PZPP20742 1482 aa24.72■■□□□ 1.55
SCARB1-203ENST00000415380 FANCIQ9NVI1 1328 aa24.7■■□□□ 1.54
SCARB1-203ENST00000415380 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
SCARB1-203ENST00000415380 CAMSAP2Q08AD1 1489 aa24.67■■□□□ 1.54
SCARB1-203ENST00000415380 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
SCARB1-203ENST00000415380 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
SCARB1-203ENST00000415380 TROQ12816 1431 aaPredicted RBP24.65■■□□□ 1.54
SCARB1-203ENST00000415380 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
SCARB1-203ENST00000415380 CFDP1Q9UEE9 299 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-203ENST00000415380 ADGBQ8N7X0 1667 aa24.63■■□□□ 1.53
SCARB1-203ENST00000415380 KIAA1107Q9UPP5 1409 aa24.61■■□□□ 1.53
SCARB1-203ENST00000415380 ITSN2Q9NZM3 1697 aa24.61■■□□□ 1.53
SCARB1-203ENST00000415380 DHX29Q7Z478 1369 aaKnown RBP24.6■■□□□ 1.53
SCARB1-203ENST00000415380 GPATCH8Q9UKJ3 1502 aaKnown RBP24.6■■□□□ 1.53
SCARB1-203ENST00000415380 ADGRL2O95490 1459 aa24.59■■□□□ 1.53
SCARB1-203ENST00000415380 B4GALNT3Q6L9W6 998 aa24.58■■□□□ 1.53
SCARB1-203ENST00000415380 BCORL1Q5H9F3 1711 aa24.58■■□□□ 1.53
SCARB1-203ENST00000415380 USP47Q96K76 1375 aa24.58■■□□□ 1.53
SCARB1-203ENST00000415380 CROCC2H7BZ55 1655 aa24.56■■□□□ 1.52
SCARB1-203ENST00000415380 KIF14Q15058 1648 aa24.56■■□□□ 1.52
SCARB1-203ENST00000415380 ZNF777Q9ULD5 760 aaPredicted RBP24.55■■□□□ 1.52
SCARB1-203ENST00000415380 PKD2Q13563 968 aa24.55■■□□□ 1.52
SCARB1-203ENST00000415380 PLB1Q6P1J6 1458 aa24.55■■□□□ 1.52
SCARB1-203ENST00000415380 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
SCARB1-203ENST00000415380 ADCY10Q96PN6 1610 aa24.55■■□□□ 1.52
SCARB1-203ENST00000415380 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
SCARB1-203ENST00000415380 KDM5CP41229 1560 aa24.53■■□□□ 1.52
SCARB1-203ENST00000415380 SMG6Q86US8 1419 aaKnown RBP24.52■■□□□ 1.52
SCARB1-203ENST00000415380 ANKRD30AQ9BXX3 1397 aa24.52■■□□□ 1.52
SCARB1-203ENST00000415380 POLR3GLQ9BT43 218 aa24.52■■□□□ 1.52
SCARB1-203ENST00000415380 CNGB1Q14028 1251 aaPredicted RBP24.51■■□□□ 1.51
SCARB1-203ENST00000415380 ARID4BQ4LE39 1312 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-203ENST00000415380 ANKRD50Q9ULJ7 1429 aa24.48■■□□□ 1.51
SCARB1-203ENST00000415380 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
SCARB1-203ENST00000415380 ERICH6Q7L0X2 663 aa24.46■■□□□ 1.51
SCARB1-203ENST00000415380 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
SCARB1-203ENST00000415380 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
SCARB1-203ENST00000415380 RALGAPBQ86X10 1494 aa24.44■■□□□ 1.5
SCARB1-203ENST00000415380 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-203ENST00000415380 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-203ENST00000415380 BCL11AQ9H165 835 aa24.41■■□□□ 1.5
SCARB1-203ENST00000415380 ROCK2O75116 1388 aaKnown RBP24.4■■□□□ 1.5
SCARB1-203ENST00000415380 NUP155O75694 1391 aa24.4■■□□□ 1.5
SCARB1-203ENST00000415380 RNF123Q5XPI4 1314 aa24.4■■□□□ 1.5
SCARB1-203ENST00000415380 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
SCARB1-203ENST00000415380 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.5
SCARB1-203ENST00000415380 CARMIL2Q6F5E8 1435 aa24.39■■□□□ 1.49
SCARB1-203ENST00000415380 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
SCARB1-203ENST00000415380 SHANK2Q9UPX8 1470 aa24.38■■□□□ 1.49
SCARB1-203ENST00000415380 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
SCARB1-203ENST00000415380 C9orf84Q5VXU9 1444 aa24.38■■□□□ 1.49
SCARB1-203ENST00000415380 ARHGEF12Q9NZN5 1544 aa24.38■■□□□ 1.49
SCARB1-203ENST00000415380 ABCC10Q5T3U5 1492 aa24.36■■□□□ 1.49
SCARB1-203ENST00000415380 TMC1Q8TDI8 760 aa24.35■■□□□ 1.49
SCARB1-203ENST00000415380 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
SCARB1-203ENST00000415380 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
SCARB1-203ENST00000415380 PLEKHD1A6NEE1 506 aa24.34■■□□□ 1.49
SCARB1-203ENST00000415380 FBLN2P98095 1184 aa24.34■■□□□ 1.49
SCARB1-203ENST00000415380 KIF15Q9NS87 1388 aa24.33■■□□□ 1.49
SCARB1-203ENST00000415380 SENP3-EIF4A1A0A087X0R7 540 aa24.33■■□□□ 1.49
SCARB1-203ENST00000415380 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
SCARB1-203ENST00000415380 NUP160Q12769 1436 aa24.31■■□□□ 1.48
SCARB1-203ENST00000415380 ABCA8O94911 1581 aa24.31■■□□□ 1.48
SCARB1-203ENST00000415380 ST20-MTHFSA0A0A6YYL1 179 aa24.31■■□□□ 1.48
SCARB1-203ENST00000415380 ATP10BO94823 1461 aa24.3■■□□□ 1.48
SCARB1-203ENST00000415380 CCDC136Q96JN2 1154 aa24.29■■□□□ 1.48
SCARB1-203ENST00000415380 TSPY4P0CV99 314 aa24.29■■□□□ 1.48
SCARB1-203ENST00000415380 TSPY10P0CW01 314 aa24.29■■□□□ 1.48
SCARB1-203ENST00000415380 LRPPRCP42704 1394 aaKnown RBP24.28■■□□□ 1.48
SCARB1-203ENST00000415380 PTPRGP23470 1445 aa24.28■■□□□ 1.48
SCARB1-203ENST00000415380 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms