RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
CTNND1-206ENST00000415361 STK26Q9P289 416 aa11.04□□□□□ -0.64
CTNND1-206ENST00000415361 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
CTNND1-206ENST00000415361 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
CTNND1-206ENST00000415361 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
CTNND1-206ENST00000415361 NUP155O75694 1391 aa11.03□□□□□ -0.64
CTNND1-206ENST00000415361 MAPK8IP3Q9UPT6 1336 aa11.03□□□□□ -0.64
CTNND1-206ENST00000415361 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
CTNND1-206ENST00000415361 MS4A1P11836 297 aa11.01□□□□□ -0.65
CTNND1-206ENST00000415361 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
CTNND1-206ENST00000415361 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
CTNND1-206ENST00000415361 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
CTNND1-206ENST00000415361 ZRSR1Q15695 479 aaKnown RBP10.99□□□□□ -0.65
CTNND1-206ENST00000415361 SOX12O15370 315 aa10.99□□□□□ -0.65
CTNND1-206ENST00000415361 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
CTNND1-206ENST00000415361 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
CTNND1-206ENST00000415361 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
CTNND1-206ENST00000415361 TNNT2P45379 298 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-206ENST00000415361 FTSJ3Q8IY81 847 aaKnown RBP10.98□□□□□ -0.65
CTNND1-206ENST00000415361 PRG4Q92954 1404 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-206ENST00000415361 AEBP2Q6ZN18 517 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-206ENST00000415361 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
CTNND1-206ENST00000415361 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
CTNND1-206ENST00000415361 PRDM2Q13029 1718 aa10.96□□□□□ -0.65
CTNND1-206ENST00000415361 EID1Q9Y6B2 187 aa10.96□□□□□ -0.65
CTNND1-206ENST00000415361 MPHOSPH9Q99550 1183 aa10.96□□□□□ -0.66
CTNND1-206ENST00000415361 SENP3-EIF4A1A0A087X0R7 540 aa10.95□□□□□ -0.66
CTNND1-206ENST00000415361 ARXQ96QS3 562 aa10.95□□□□□ -0.66
CTNND1-206ENST00000415361 NPHP1O15259 732 aa10.95□□□□□ -0.66
CTNND1-206ENST00000415361 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
CTNND1-206ENST00000415361 CUX1P39880 1505 aa10.93□□□□□ -0.66
CTNND1-206ENST00000415361 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
CTNND1-206ENST00000415361 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
CTNND1-206ENST00000415361 TMF1P82094 1093 aa10.92□□□□□ -0.66
CTNND1-206ENST00000415361 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
CTNND1-206ENST00000415361 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
CTNND1-206ENST00000415361 RAB3GAP2Q9H2M9 1393 aa10.91□□□□□ -0.66
CTNND1-206ENST00000415361 CC2D1BQ5T0F9 858 aaKnown RBP10.91□□□□□ -0.66
CTNND1-206ENST00000415361 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
CTNND1-206ENST00000415361 TRIM44Q96DX7 344 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-206ENST00000415361 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
CTNND1-206ENST00000415361 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
CTNND1-206ENST00000415361 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CTNND1-206ENST00000415361 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
CTNND1-206ENST00000415361 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-206ENST00000415361 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
CTNND1-206ENST00000415361 GOLGA6L6A8MZA4 724 aa10.88□□□□□ -0.67
CTNND1-206ENST00000415361 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
CTNND1-206ENST00000415361 U2SURPO15042 1029 aaKnown RBP10.87□□□□□ -0.67
CTNND1-206ENST00000415361 CHMP4AQ9BY43 222 aa10.87□□□□□ -0.67
CTNND1-206ENST00000415361 NBR1Q14596 966 aa10.85□□□□□ -0.67
CTNND1-206ENST00000415361 MIER1Q8N108 512 aa10.85□□□□□ -0.67
CTNND1-206ENST00000415361 SYNJ2O15056 1496 aa10.85□□□□□ -0.67
CTNND1-206ENST00000415361 ROCK2O75116 1388 aaKnown RBP10.85□□□□□ -0.67
CTNND1-206ENST00000415361 TOP2BQ02880 1626 aa10.85□□□□□ -0.67
CTNND1-206ENST00000415361 HDGFL2Q7Z4V5 671 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-206ENST00000415361 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
CTNND1-206ENST00000415361 PTMAP06454 111 aaKnown RBP10.84□□□□□ -0.67
CTNND1-206ENST00000415361 FGD1P98174 961 aa10.83□□□□□ -0.68
CTNND1-206ENST00000415361 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
CTNND1-206ENST00000415361 NRDCO43847 1150 aa10.82□□□□□ -0.68
CTNND1-206ENST00000415361 MORC1Q86VD1 984 aa10.82□□□□□ -0.68
CTNND1-206ENST00000415361 MCCP23508 829 aa10.82□□□□□ -0.68
CTNND1-206ENST00000415361 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
CTNND1-206ENST00000415361 HSPA5P11021 654 aaKnown RBP10.82□□□□□ -0.68
CTNND1-206ENST00000415361 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
CTNND1-206ENST00000415361 CSB-PGBD3P0DP91 1061 aa10.82□□□□□ -0.68
CTNND1-206ENST00000415361 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-206ENST00000415361 TRAK1Q9UPV9 953 aa10.82□□□□□ -0.68
CTNND1-206ENST00000415361 KCNJ4P48050 445 aa10.81□□□□□ -0.68
CTNND1-206ENST00000415361 ARHGAP5Q13017 1502 aa10.81□□□□□ -0.68
CTNND1-206ENST00000415361 NGDNQ8NEJ9 315 aaKnown RBP10.81□□□□□ -0.68
CTNND1-206ENST00000415361 EIF3AQ14152 1382 aaKnown RBP10.8□□□□□ -0.68
CTNND1-206ENST00000415361 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
CTNND1-206ENST00000415361 PPP4R2Q9NY27 417 aa10.79□□□□□ -0.68
CTNND1-206ENST00000415361 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
CTNND1-206ENST00000415361 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
CTNND1-206ENST00000415361 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
CTNND1-206ENST00000415361 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-206ENST00000415361 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
CTNND1-206ENST00000415361 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
CTNND1-206ENST00000415361 ZNF608Q9ULD9 1512 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-206ENST00000415361 CASKIN1Q8WXD9 1431 aa10.77□□□□□ -0.68
CTNND1-206ENST00000415361 ABCA10Q8WWZ4 1543 aa10.77□□□□□ -0.68
CTNND1-206ENST00000415361 IPO8O15397 1037 aaKnown RBP10.77□□□□□ -0.69
CTNND1-206ENST00000415361 KIF21BO75037 1637 aa10.77□□□□□ -0.69
CTNND1-206ENST00000415361 VGFO15240 615 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-206ENST00000415361 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
CTNND1-206ENST00000415361 TMX4Q9H1E5 349 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-206ENST00000415361 HDAC5Q9UQL6 1122 aa10.77□□□□□ -0.69
CTNND1-206ENST00000415361 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
CTNND1-206ENST00000415361 KTN1Q86UP2 1357 aaKnown RBP10.76□□□□□ -0.69
CTNND1-206ENST00000415361 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
CTNND1-206ENST00000415361 L1TD1Q5T7N2 865 aaKnown RBP10.75□□□□□ -0.69
CTNND1-206ENST00000415361 GOLGA6L4A6NEF3 574 aa10.75□□□□□ -0.69
CTNND1-206ENST00000415361 FGD6Q6ZV73 1430 aa10.74□□□□□ -0.69
CTNND1-206ENST00000415361 NCOA2Q15596 1464 aa10.74□□□□□ -0.69
CTNND1-206ENST00000415361 DNTTIP2Q5QJE6 756 aaKnown RBP10.73□□□□□ -0.69
CTNND1-206ENST00000415361 HSCBQ8IWL3 235 aa10.73□□□□□ -0.69
CTNND1-206ENST00000415361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.692e-8■□□□□ 11.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms