RNA–Protein interactions for RNA: ENST00000414034.7

GHDC-202, Transcript of GH3 domain containing, humanhuman

TSL 2 BASIC

Gene GHDC, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-202ENST00000414034 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
GHDC-202ENST00000414034 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
GHDC-202ENST00000414034 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
GHDC-202ENST00000414034 MYOM3Q5VTT5 1437 aa23.38■■□□□ 1.33
GHDC-202ENST00000414034 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
GHDC-202ENST00000414034 HECW1Q76N89 1606 aa23.35■■□□□ 1.33
GHDC-202ENST00000414034 L3MBTL2Q969R5 705 aa23.35■■□□□ 1.33
GHDC-202ENST00000414034 EIF4G3O43432 1585 aaKnown RBP23.35■■□□□ 1.33
GHDC-202ENST00000414034 RTN4Q9NQC3 1192 aaKnown RBP23.34■■□□□ 1.33
GHDC-202ENST00000414034 DENND4BO75064 1496 aaPredicted RBP23.33■■□□□ 1.33
GHDC-202ENST00000414034 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
GHDC-202ENST00000414034 NEFMP07197 916 aa23.32■■□□□ 1.32
GHDC-202ENST00000414034 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
GHDC-202ENST00000414034 SNAPC4Q5SXM2 1469 aa23.32■■□□□ 1.32
GHDC-202ENST00000414034 RRP7BPQ9NSQ0 103 aa23.3■■□□□ 1.32
GHDC-202ENST00000414034 TCERG1O14776 1098 aaKnown RBP23.27■■□□□ 1.32
GHDC-202ENST00000414034 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
GHDC-202ENST00000414034 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.32
GHDC-202ENST00000414034 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
GHDC-202ENST00000414034 GCC2Q8IWJ2 1684 aa23.27■■□□□ 1.31
GHDC-202ENST00000414034 PPM1GO15355 546 aaPredicted RBP23.26■■□□□ 1.31
GHDC-202ENST00000414034 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
GHDC-202ENST00000414034 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
GHDC-202ENST00000414034 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
GHDC-202ENST00000414034 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
GHDC-202ENST00000414034 LAS1LQ9Y4W2 734 aaKnown RBP23.25■■□□□ 1.31
GHDC-202ENST00000414034 NBPF8Q3BBV2 869 aa23.22■■□□□ 1.31
GHDC-202ENST00000414034 CHIC2Q9UKJ5 165 aa23.22■■□□□ 1.31
GHDC-202ENST00000414034 EHBP1L1Q8N3D4 1523 aa23.21■■□□□ 1.31
GHDC-202ENST00000414034 PDE4AP27815 886 aa23.2■■□□□ 1.3
GHDC-202ENST00000414034 FBLN2P98095 1184 aa23.2■■□□□ 1.3
GHDC-202ENST00000414034 CTTNBP2Q8WZ74 1663 aa23.2■■□□□ 1.3
GHDC-202ENST00000414034 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.3
GHDC-202ENST00000414034 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.19■■□□□ 1.3
GHDC-202ENST00000414034 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
GHDC-202ENST00000414034 MS4A1P11836 297 aa23.18■■□□□ 1.3
GHDC-202ENST00000414034 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
GHDC-202ENST00000414034 BACH2Q9BYV9 841 aa23.17■■□□□ 1.3
GHDC-202ENST00000414034 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
GHDC-202ENST00000414034 MIA2Q96PC5 1412 aa23.15■■□□□ 1.3
GHDC-202ENST00000414034 TEX14Q8IWB6 1497 aa23.15■■□□□ 1.3
GHDC-202ENST00000414034 KDM6BO15054 1643 aa23.14■■□□□ 1.3
GHDC-202ENST00000414034 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.3
GHDC-202ENST00000414034 GRIN2BQ13224 1484 aa23.14■■□□□ 1.3
GHDC-202ENST00000414034 FOXD1Q16676 465 aa23.14■■□□□ 1.29
GHDC-202ENST00000414034 PNISRQ8TF01 805 aaKnown RBP23.14■■□□□ 1.29
GHDC-202ENST00000414034 UBE2Q2Q8WVN8 375 aa23.14■■□□□ 1.29
GHDC-202ENST00000414034 ANKRD30BQ9BXX2 1392 aa23.13■■□□□ 1.29
GHDC-202ENST00000414034 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
GHDC-202ENST00000414034 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
GHDC-202ENST00000414034 CUL7Q14999 1698 aa23.13■■□□□ 1.29
GHDC-202ENST00000414034 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
GHDC-202ENST00000414034 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
GHDC-202ENST00000414034 TMC1Q8TDI8 760 aa23.11■■□□□ 1.29
GHDC-202ENST00000414034 EXOC6Q8TAG9 804 aa23.1■■□□□ 1.29
GHDC-202ENST00000414034 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
GHDC-202ENST00000414034 GSE1Q14687 1217 aa23.09■■□□□ 1.29
GHDC-202ENST00000414034 CHD1O14646 1710 aa23.09■■□□□ 1.29
GHDC-202ENST00000414034 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
GHDC-202ENST00000414034 SAMD9Q5K651 1589 aa23.07■■□□□ 1.28
GHDC-202ENST00000414034 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
GHDC-202ENST00000414034 BRPF3Q9ULD4 1205 aa23.05■■□□□ 1.28
GHDC-202ENST00000414034 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
GHDC-202ENST00000414034 POLR3GLQ9BT43 218 aa23.04■■□□□ 1.28
GHDC-202ENST00000414034 RCAN3Q9UKA8 241 aa23.04■■□□□ 1.28
GHDC-202ENST00000414034 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
GHDC-202ENST00000414034 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
GHDC-202ENST00000414034 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
GHDC-202ENST00000414034 MAGI3Q5TCQ9 1506 aa23■■□□□ 1.27
GHDC-202ENST00000414034 ROCK2O75116 1388 aaKnown RBP23■■□□□ 1.27
GHDC-202ENST00000414034 USP47Q96K76 1375 aa23■■□□□ 1.27
GHDC-202ENST00000414034 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
GHDC-202ENST00000414034 NFKBIBQ15653 356 aa22.98■■□□□ 1.27
GHDC-202ENST00000414034 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
GHDC-202ENST00000414034 BCORL1Q5H9F3 1711 aa22.97■■□□□ 1.27
GHDC-202ENST00000414034 BRD4O60885 1362 aaPredicted RBP22.97■■□□□ 1.27
GHDC-202ENST00000414034 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
GHDC-202ENST00000414034 ROCK1Q13464 1354 aa22.95■■□□□ 1.26
GHDC-202ENST00000414034 PDE3BQ13370 1112 aa22.94■■□□□ 1.26
GHDC-202ENST00000414034 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
GHDC-202ENST00000414034 EIF5BO60841 1220 aaKnown RBP22.93■■□□□ 1.26
GHDC-202ENST00000414034 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
GHDC-202ENST00000414034 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
GHDC-202ENST00000414034 FRAT1Q92837 279 aaPredicted RBP22.92■■□□□ 1.26
GHDC-202ENST00000414034 DAXXQ9UER7 740 aaPredicted RBP22.92■■□□□ 1.26
GHDC-202ENST00000414034 RALBP1Q15311 655 aa22.9■■□□□ 1.26
GHDC-202ENST00000414034 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
GHDC-202ENST00000414034 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
GHDC-202ENST00000414034 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
GHDC-202ENST00000414034 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
GHDC-202ENST00000414034 KDM5CP41229 1560 aa22.88■■□□□ 1.25
GHDC-202ENST00000414034 DAPK1P53355 1430 aa22.86■■□□□ 1.25
GHDC-202ENST00000414034 KIF14Q15058 1648 aa22.86■■□□□ 1.25
GHDC-202ENST00000414034 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
GHDC-202ENST00000414034 RSPH6AQ9H0K4 717 aa22.85■■□□□ 1.25
GHDC-202ENST00000414034 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
GHDC-202ENST00000414034 EPRSP07814 1512 aaKnown RBP22.81■■□□□ 1.24
GHDC-202ENST00000414034 FAM43AQ8N2R8 423 aa22.81■■□□□ 1.24
GHDC-202ENST00000414034 SLC4A3P48751 1232 aa22.81■■□□□ 1.24
GHDC-202ENST00000414034 CLASP1Q7Z460 1538 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms