RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
CRIM1-202ENST00000413985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
CRIM1-202ENST00000413985 UHRF1BP1Q6BDS2 1440 aa19.03■□□□□ 0.64
CRIM1-202ENST00000413985 PTPRTO14522 1441 aa19.02■□□□□ 0.64
CRIM1-202ENST00000413985 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
CRIM1-202ENST00000413985 PRXQ9BXM0 1461 aa19.02■□□□□ 0.63
CRIM1-202ENST00000413985 SAMD9Q5K651 1589 aa19■□□□□ 0.63
CRIM1-202ENST00000413985 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
CRIM1-202ENST00000413985 C9orf84Q5VXU9 1444 aa18.98■□□□□ 0.63
CRIM1-202ENST00000413985 ATP10AO60312 1499 aa18.97■□□□□ 0.63
CRIM1-202ENST00000413985 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
CRIM1-202ENST00000413985 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
CRIM1-202ENST00000413985 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
CRIM1-202ENST00000413985 C3P01024 1663 aa18.92■□□□□ 0.62
CRIM1-202ENST00000413985 SETD1BQ9UPS6 1966 aaKnown RBP18.91■□□□□ 0.62
CRIM1-202ENST00000413985 NCOA1Q15788 1441 aa18.9■□□□□ 0.62
CRIM1-202ENST00000413985 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.61
CRIM1-202ENST00000413985 MED1Q15648 1581 aaPredicted RBP18.88■□□□□ 0.61
CRIM1-202ENST00000413985 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
CRIM1-202ENST00000413985 ZNF335Q9H4Z2 1342 aaPredicted RBP18.87■□□□□ 0.61
CRIM1-202ENST00000413985 PLCH2O75038 1416 aa18.85■□□□□ 0.61
CRIM1-202ENST00000413985 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
CRIM1-202ENST00000413985 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
CRIM1-202ENST00000413985 DIP2CQ9Y2E4 1556 aa18.81■□□□□ 0.6
CRIM1-202ENST00000413985 TRAPPC8Q9Y2L5 1435 aa18.81■□□□□ 0.6
CRIM1-202ENST00000413985 NCKAP5LQ9HCH0 1330 aa18.79■□□□□ 0.6
CRIM1-202ENST00000413985 AFAP1Q8N556 730 aa18.79■□□□□ 0.6
CRIM1-202ENST00000413985 KDM5CP41229 1560 aa18.78■□□□□ 0.6
CRIM1-202ENST00000413985 HSPA1LP34931 641 aa18.78■□□□□ 0.6
CRIM1-202ENST00000413985 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
CRIM1-202ENST00000413985 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
CRIM1-202ENST00000413985 MYO5CQ9NQX4 1742 aa18.76■□□□□ 0.59
CRIM1-202ENST00000413985 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
CRIM1-202ENST00000413985 REREQ9P2R6 1566 aa18.74■□□□□ 0.59
CRIM1-202ENST00000413985 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
CRIM1-202ENST00000413985 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
CRIM1-202ENST00000413985 KIF14Q15058 1648 aa18.71■□□□□ 0.59
CRIM1-202ENST00000413985 PIP4K2BP78356 416 aa18.71■□□□□ 0.59
CRIM1-202ENST00000413985 ESF1Q9H501 851 aaKnown RBP18.7■□□□□ 0.58
CRIM1-202ENST00000413985 AGLP35573 1532 aa18.69■□□□□ 0.58
CRIM1-202ENST00000413985 ARHGAP5Q13017 1502 aa18.68■□□□□ 0.58
CRIM1-202ENST00000413985 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CRIM1-202ENST00000413985 NPATQ14207 1427 aa18.65■□□□□ 0.58
CRIM1-202ENST00000413985 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
CRIM1-202ENST00000413985 MLH3Q9UHC1 1453 aa18.65■□□□□ 0.58
CRIM1-202ENST00000413985 TCOF1Q13428 1488 aaKnown RBP18.64■□□□□ 0.57
CRIM1-202ENST00000413985 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
CRIM1-202ENST00000413985 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
CRIM1-202ENST00000413985 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
CRIM1-202ENST00000413985 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
CRIM1-202ENST00000413985 PLA2R1Q13018 1463 aa18.62■□□□□ 0.57
CRIM1-202ENST00000413985 MROH2AA6NES4 1674 aa18.62■□□□□ 0.57
CRIM1-202ENST00000413985 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
CRIM1-202ENST00000413985 PKD2Q13563 968 aa18.61■□□□□ 0.57
CRIM1-202ENST00000413985 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
CRIM1-202ENST00000413985 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
CRIM1-202ENST00000413985 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
CRIM1-202ENST00000413985 CDC42BPBQ9Y5S2 1711 aa18.6■□□□□ 0.57
CRIM1-202ENST00000413985 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
CRIM1-202ENST00000413985 ABCC1P33527 1531 aa18.58■□□□□ 0.56
CRIM1-202ENST00000413985 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
CRIM1-202ENST00000413985 ALKQ9UM73 1620 aa18.57■□□□□ 0.56
CRIM1-202ENST00000413985 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
CRIM1-202ENST00000413985 CLTCQ00610 1675 aaKnown RBP18.57■□□□□ 0.56
CRIM1-202ENST00000413985 TOM1O60784 492 aa18.56■□□□□ 0.56
CRIM1-202ENST00000413985 TROQ12816 1431 aaPredicted RBP18.54■□□□□ 0.56
CRIM1-202ENST00000413985 PTPRKQ15262 1439 aa18.53■□□□□ 0.56
CRIM1-202ENST00000413985 CPS1P31327 1500 aa18.51■□□□□ 0.55
CRIM1-202ENST00000413985 RGS17Q9UGC6 210 aaPredicted RBP18.51■□□□□ 0.55
CRIM1-202ENST00000413985 PREX2Q70Z35 1606 aa18.51■□□□□ 0.55
CRIM1-202ENST00000413985 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
CRIM1-202ENST00000413985 LRRIQ1Q96JM4 1722 aa18.5■□□□□ 0.55
CRIM1-202ENST00000413985 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
CRIM1-202ENST00000413985 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
CRIM1-202ENST00000413985 SAMD9LQ8IVG5 1584 aa18.47■□□□□ 0.55
CRIM1-202ENST00000413985 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
CRIM1-202ENST00000413985 CLIP1P30622 1438 aa18.47■□□□□ 0.55
CRIM1-202ENST00000413985 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
CRIM1-202ENST00000413985 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
CRIM1-202ENST00000413985 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
CRIM1-202ENST00000413985 FMN1Q68DA7 1419 aa18.42■□□□□ 0.54
CRIM1-202ENST00000413985 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
CRIM1-202ENST00000413985 CDC42BPAQ5VT25 1732 aa18.41■□□□□ 0.54
CRIM1-202ENST00000413985 GGT6Q6P531 493 aa18.41■□□□□ 0.54
CRIM1-202ENST00000413985 SYCP2Q9BX26 1530 aa18.4■□□□□ 0.54
CRIM1-202ENST00000413985 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.54
CRIM1-202ENST00000413985 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
CRIM1-202ENST00000413985 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
CRIM1-202ENST00000413985 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
CRIM1-202ENST00000413985 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
CRIM1-202ENST00000413985 A2MP01023 1474 aa18.37■□□□□ 0.53
CRIM1-202ENST00000413985 ATP7AQ04656 1500 aa18.37■□□□□ 0.53
CRIM1-202ENST00000413985 POTEAQ6S8J7 498 aa18.36■□□□□ 0.53
CRIM1-202ENST00000413985 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.53
CRIM1-202ENST00000413985 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
CRIM1-202ENST00000413985 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
CRIM1-202ENST00000413985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
CRIM1-202ENST00000413985 EEA1Q15075 1411 aa18.33■□□□□ 0.53
CRIM1-202ENST00000413985 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.52
CRIM1-202ENST00000413985 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms