RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
PKP4-203ENST00000411900 CDC42BPBQ9Y5S2 1711 aa16.25■□□□□ 0.19
PKP4-203ENST00000411900 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
PKP4-203ENST00000411900 EFCAB2Q5VUJ9 269 aa16.25■□□□□ 0.19
PKP4-203ENST00000411900 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
PKP4-203ENST00000411900 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
PKP4-203ENST00000411900 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
PKP4-203ENST00000411900 SIGLEC1Q9BZZ2 1709 aa16.24■□□□□ 0.19
PKP4-203ENST00000411900 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
PKP4-203ENST00000411900 MADDQ8WXG6 1647 aa16.23■□□□□ 0.19
PKP4-203ENST00000411900 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
PKP4-203ENST00000411900 CDC42BPAQ5VT25 1732 aa16.21■□□□□ 0.19
PKP4-203ENST00000411900 RIMS1Q86UR5 1692 aaKnown RBP16.2■□□□□ 0.18
PKP4-203ENST00000411900 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
PKP4-203ENST00000411900 PTPRMP28827 1452 aa16.19■□□□□ 0.18
PKP4-203ENST00000411900 MAGI2Q86UL8 1455 aa16.18■□□□□ 0.18
PKP4-203ENST00000411900 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
PKP4-203ENST00000411900 MLECQ14165 292 aa16.17■□□□□ 0.18
PKP4-203ENST00000411900 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
PKP4-203ENST00000411900 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
PKP4-203ENST00000411900 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
PKP4-203ENST00000411900 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
PKP4-203ENST00000411900 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
PKP4-203ENST00000411900 ABCC1P33527 1531 aa16.15■□□□□ 0.18
PKP4-203ENST00000411900 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.18
PKP4-203ENST00000411900 KDM5CP41229 1560 aa16.14■□□□□ 0.17
PKP4-203ENST00000411900 ZNF777Q9ULD5 760 aaPredicted RBP16.14■□□□□ 0.17
PKP4-203ENST00000411900 ATP10AO60312 1499 aa16.13■□□□□ 0.17
PKP4-203ENST00000411900 FER1L4A9Z1Z3 1794 aa16.13■□□□□ 0.17
PKP4-203ENST00000411900 C9orf84Q5VXU9 1444 aa16.12■□□□□ 0.17
PKP4-203ENST00000411900 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
PKP4-203ENST00000411900 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
PKP4-203ENST00000411900 SAMD9LQ8IVG5 1584 aa16.11■□□□□ 0.17
PKP4-203ENST00000411900 ABCA6Q8N139 1617 aa16.11■□□□□ 0.17
PKP4-203ENST00000411900 GPATCH8Q9UKJ3 1502 aaKnown RBP16.1■□□□□ 0.17
PKP4-203ENST00000411900 DIP2CQ9Y2E4 1556 aa16.1■□□□□ 0.17
PKP4-203ENST00000411900 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
PKP4-203ENST00000411900 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.16
PKP4-203ENST00000411900 EHBP1L1Q8N3D4 1523 aa16.07■□□□□ 0.16
PKP4-203ENST00000411900 KIDINS220Q9ULH0 1771 aa16.07■□□□□ 0.16
PKP4-203ENST00000411900 MLH3Q9UHC1 1453 aa16.06■□□□□ 0.16
PKP4-203ENST00000411900 HNRNPMP52272 730 aaKnown RBP eCLIP16.06■□□□□ 0.163e-6■■■□□ 19.2
PKP4-203ENST00000411900 TIAM1Q13009 1591 aa16.05■□□□□ 0.16
PKP4-203ENST00000411900 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
PKP4-203ENST00000411900 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
PKP4-203ENST00000411900 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
PKP4-203ENST00000411900 SUPT6HQ7KZ85 1726 aaKnown RBP16.01■□□□□ 0.15
PKP4-203ENST00000411900 ZNF644Q9H582 1327 aaPredicted RBP16■□□□□ 0.15
PKP4-203ENST00000411900 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
PKP4-203ENST00000411900 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
PKP4-203ENST00000411900 SPAG9O60271 1321 aaKnown RBP15.99■□□□□ 0.15
PKP4-203ENST00000411900 NCOA2Q15596 1464 aa15.98■□□□□ 0.15
PKP4-203ENST00000411900 PLEKHH2Q8IVE3 1493 aa15.98■□□□□ 0.15
PKP4-203ENST00000411900 HSPA2P54652 639 aa15.98■□□□□ 0.15
PKP4-203ENST00000411900 ATP7AQ04656 1500 aa15.98■□□□□ 0.15
PKP4-203ENST00000411900 INO80Q9ULG1 1556 aaPredicted RBP15.97■□□□□ 0.15
PKP4-203ENST00000411900 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
PKP4-203ENST00000411900 AGLP35573 1532 aa15.96■□□□□ 0.15
PKP4-203ENST00000411900 C3P01024 1663 aa15.95■□□□□ 0.14
PKP4-203ENST00000411900 PREX1Q8TCU6 1659 aa15.93■□□□□ 0.14
PKP4-203ENST00000411900 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
PKP4-203ENST00000411900 ESF1Q9H501 851 aaKnown RBP15.93■□□□□ 0.14
PKP4-203ENST00000411900 CAMSAP2Q08AD1 1489 aa15.92■□□□□ 0.14
PKP4-203ENST00000411900 MBD5Q9P267 1494 aa15.92■□□□□ 0.14
PKP4-203ENST00000411900 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
PKP4-203ENST00000411900 ILDR1Q86SU0 546 aaPredicted RBP15.91■□□□□ 0.14
PKP4-203ENST00000411900 ADGBQ8N7X0 1667 aa15.91■□□□□ 0.14
PKP4-203ENST00000411900 A2MP01023 1474 aa15.91■□□□□ 0.14
PKP4-203ENST00000411900 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
PKP4-203ENST00000411900 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
PKP4-203ENST00000411900 CCDC141Q6ZP82 1450 aa15.87■□□□□ 0.13
PKP4-203ENST00000411900 GGT6Q6P531 493 aa15.86■□□□□ 0.13
PKP4-203ENST00000411900 SETD1BQ9UPS6 1966 aaKnown RBP15.86■□□□□ 0.13
PKP4-203ENST00000411900 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
PKP4-203ENST00000411900 MAP3K1Q13233 1512 aa15.85■□□□□ 0.13
PKP4-203ENST00000411900 MROH2AA6NES4 1674 aa15.85■□□□□ 0.13
PKP4-203ENST00000411900 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
PKP4-203ENST00000411900 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
PKP4-203ENST00000411900 APLP2Q06481 763 aa15.82■□□□□ 0.12
PKP4-203ENST00000411900 ARHGEF5Q12774 1597 aa15.82■□□□□ 0.12
PKP4-203ENST00000411900 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
PKP4-203ENST00000411900 STRCQ7RTU9 1775 aa15.81■□□□□ 0.12
PKP4-203ENST00000411900 MYOM3Q5VTT5 1437 aa15.8■□□□□ 0.12
PKP4-203ENST00000411900 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
PKP4-203ENST00000411900 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
PKP4-203ENST00000411900 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
PKP4-203ENST00000411900 RSPH4AQ5TD94 716 aa15.79■□□□□ 0.12
PKP4-203ENST00000411900 KIF3BO15066 747 aa15.78■□□□□ 0.12
PKP4-203ENST00000411900 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
PKP4-203ENST00000411900 NPATQ14207 1427 aa15.75■□□□□ 0.11
PKP4-203ENST00000411900 MYO3AQ8NEV4 1616 aa15.75■□□□□ 0.11
PKP4-203ENST00000411900 PTPN23Q9H3S7 1636 aa15.75■□□□□ 0.11
PKP4-203ENST00000411900 MAST1Q9Y2H9 1570 aa15.75■□□□□ 0.11
PKP4-203ENST00000411900 PTPRKQ15262 1439 aa15.73■□□□□ 0.11
PKP4-203ENST00000411900 CROCC2H7BZ55 1655 aa15.72■□□□□ 0.11
PKP4-203ENST00000411900 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
PKP4-203ENST00000411900 FBXO41Q8TF61 875 aa15.71■□□□□ 0.11
PKP4-203ENST00000411900 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
PKP4-203ENST00000411900 KDM5DQ9BY66 1539 aa15.71■□□□□ 0.11
PKP4-203ENST00000411900 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms