RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 AXIN2Q9Y2T1 843 aa9.87□□□□□ -0.83
RNU4-61P-201ENST00000411243 IFFO2Q5TF58 517 aa9.85□□□□□ -0.83
RNU4-61P-201ENST00000411243 A0A0G2JS52 829 aa9.8□□□□□ -0.84
RNU4-61P-201ENST00000411243 HRO43593 1189 aa9.78□□□□□ -0.84
RNU4-61P-201ENST00000411243 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
RNU4-61P-201ENST00000411243 TK2O00142 265 aa9.76□□□□□ -0.85
RNU4-61P-201ENST00000411243 NUDT7P0C024 238 aa9.76□□□□□ -0.85
RNU4-61P-201ENST00000411243 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
RNU4-61P-201ENST00000411243 LHX6Q9UPM6 363 aa9.76□□□□□ -0.85
RNU4-61P-201ENST00000411243 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
RNU4-61P-201ENST00000411243 Q6ZNB5 142 aa9.75□□□□□ -0.85
RNU4-61P-201ENST00000411243 MS4A4AQ96JQ5 239 aa9.68□□□□□ -0.86
RNU4-61P-201ENST00000411243 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
RNU4-61P-201ENST00000411243 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
RNU4-61P-201ENST00000411243 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
RNU4-61P-201ENST00000411243 PSDA5PKW4 1024 aaPredicted RBP9.63□□□□□ -0.87
RNU4-61P-201ENST00000411243 PTPN5P54829 565 aa9.62□□□□□ -0.87
RNU4-61P-201ENST00000411243 PCDHGA4Q9Y5G9 962 aa9.62□□□□□ -0.87
RNU4-61P-201ENST00000411243 LCE2BO14633 110 aa9.61□□□□□ -0.87
RNU4-61P-201ENST00000411243 SOX12O15370 315 aa9.6□□□□□ -0.87
RNU4-61P-201ENST00000411243 SLC34A2O95436 690 aa9.6□□□□□ -0.87
RNU4-61P-201ENST00000411243 PSEN2P49810 448 aa9.59□□□□□ -0.87
RNU4-61P-201ENST00000411243 KIF3CO14782 793 aa9.58□□□□□ -0.88
RNU4-61P-201ENST00000411243 STAC3Q96MF2 364 aa9.58□□□□□ -0.88
RNU4-61P-201ENST00000411243 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
RNU4-61P-201ENST00000411243 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
RNU4-61P-201ENST00000411243 THSD4Q6ZMP0 1018 aa9.53□□□□□ -0.88
RNU4-61P-201ENST00000411243 LAPTM4AQ15012 233 aa9.52□□□□□ -0.89
RNU4-61P-201ENST00000411243 C2orf72A6NCS6 295 aa9.51□□□□□ -0.89
RNU4-61P-201ENST00000411243 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
RNU4-61P-201ENST00000411243 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
RNU4-61P-201ENST00000411243 KDM4FA0A1W2PPD8 638 aa9.49□□□□□ -0.89
RNU4-61P-201ENST00000411243 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
RNU4-61P-201ENST00000411243 VPS9D1Q9Y2B5 631 aa9.47□□□□□ -0.89
RNU4-61P-201ENST00000411243 ITGBL1O95965 494 aaPredicted RBP9.44□□□□□ -0.9
RNU4-61P-201ENST00000411243 FKBP8Q14318 412 aa9.43□□□□□ -0.9
RNU4-61P-201ENST00000411243 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
RNU4-61P-201ENST00000411243 KCNK17Q96T54 332 aa9.42□□□□□ -0.9
RNU4-61P-201ENST00000411243 KCNH8Q96L42 1107 aa9.4□□□□□ -0.9
RNU4-61P-201ENST00000411243 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
RNU4-61P-201ENST00000411243 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
RNU4-61P-201ENST00000411243 WNT2BQ93097 391 aa9.38□□□□□ -0.91
RNU4-61P-201ENST00000411243 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
RNU4-61P-201ENST00000411243 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
RNU4-61P-201ENST00000411243 NLRP6P59044 892 aa9.37□□□□□ -0.91
RNU4-61P-201ENST00000411243 GFRA3O60609 400 aa9.36□□□□□ -0.91
RNU4-61P-201ENST00000411243 TRIM41Q8WV44 630 aa9.36□□□□□ -0.91
RNU4-61P-201ENST00000411243 ZNF775Q96BV0 537 aaPredicted RBP9.36□□□□□ -0.91
RNU4-61P-201ENST00000411243 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
RNU4-61P-201ENST00000411243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.33□□□□□ -0.92
RNU4-61P-201ENST00000411243 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
RNU4-61P-201ENST00000411243 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
RNU4-61P-201ENST00000411243 ZFP91Q96JP5 570 aaPredicted RBP9.33□□□□□ -0.92
RNU4-61P-201ENST00000411243 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
RNU4-61P-201ENST00000411243 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
RNU4-61P-201ENST00000411243 MRPL50Q8N5N7 158 aaKnown RBP9.3□□□□□ -0.92
RNU4-61P-201ENST00000411243 RIOK3O14730 519 aaKnown RBP9.28□□□□□ -0.92
RNU4-61P-201ENST00000411243 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
RNU4-61P-201ENST00000411243 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
RNU4-61P-201ENST00000411243 ZBED2Q9BTP6 218 aa9.24□□□□□ -0.93
RNU4-61P-201ENST00000411243 BCL2L12Q9HB09 334 aa9.23□□□□□ -0.93
RNU4-61P-201ENST00000411243 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
RNU4-61P-201ENST00000411243 MFRPQ9BY79 579 aa9.22□□□□□ -0.93
RNU4-61P-201ENST00000411243 NBPF3Q9H094 633 aa9.22□□□□□ -0.93
RNU4-61P-201ENST00000411243 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
RNU4-61P-201ENST00000411243 KCNC4Q03721 635 aa9.21□□□□□ -0.94
RNU4-61P-201ENST00000411243 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
RNU4-61P-201ENST00000411243 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
RNU4-61P-201ENST00000411243 ANKK1Q8NFD2 765 aa9.16□□□□□ -0.94
RNU4-61P-201ENST00000411243 TBC1D12O60347 775 aa9.15□□□□□ -0.94
RNU4-61P-201ENST00000411243 PTPREP23469 700 aa9.15□□□□□ -0.94
RNU4-61P-201ENST00000411243 ZNF454Q8N9F8 522 aa9.14□□□□□ -0.95
RNU4-61P-201ENST00000411243 BCAMP50895 628 aa9.12□□□□□ -0.95
RNU4-61P-201ENST00000411243 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
RNU4-61P-201ENST00000411243 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
RNU4-61P-201ENST00000411243 FOXK1P85037 733 aa9.11□□□□□ -0.95
RNU4-61P-201ENST00000411243 PLPP6Q8IY26 295 aa9.1□□□□□ -0.95
RNU4-61P-201ENST00000411243 SOWAHBA6NEL2 793 aa9.09□□□□□ -0.95
RNU4-61P-201ENST00000411243 FOSBP53539 338 aa9.08□□□□□ -0.96
RNU4-61P-201ENST00000411243 LCE2AQ5TA79 106 aaPredicted RBP9.08□□□□□ -0.96
RNU4-61P-201ENST00000411243 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
RNU4-61P-201ENST00000411243 WBP1LQ9NX94 342 aa9.06□□□□□ -0.96
RNU4-61P-201ENST00000411243 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
RNU4-61P-201ENST00000411243 RABGEF1Q9UJ41 708 aa9.04□□□□□ -0.96
RNU4-61P-201ENST00000411243 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
RNU4-61P-201ENST00000411243 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
RNU4-61P-201ENST00000411243 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
RNU4-61P-201ENST00000411243 LAPTM4BQ86VI4 370 aa9.01□□□□□ -0.97
RNU4-61P-201ENST00000411243 DSG2Q14126 1118 aa9□□□□□ -0.97
RNU4-61P-201ENST00000411243 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
RNU4-61P-201ENST00000411243 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
RNU4-61P-201ENST00000411243 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
RNU4-61P-201ENST00000411243 STK17AQ9UEE5 414 aa8.99□□□□□ -0.97
RNU4-61P-201ENST00000411243 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
RNU4-61P-201ENST00000411243 TAOK2Q9UL54 1235 aa8.97□□□□□ -0.97
RNU4-61P-201ENST00000411243 POTECB2RU33 542 aa8.96□□□□□ -0.98
RNU4-61P-201ENST00000411243 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
RNU4-61P-201ENST00000411243 PPP1R37O75864 691 aa8.96□□□□□ -0.98
RNU4-61P-201ENST00000411243 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
RNU4-61P-201ENST00000411243 PROX2Q3B8N5 592 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms