RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NUP153P49790 1475 aaKnown RBP23.23■■□□□ 1.31
LIMS2-208ENST00000410011 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
LIMS2-208ENST00000410011 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
LIMS2-208ENST00000410011 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
LIMS2-208ENST00000410011 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
LIMS2-208ENST00000410011 BCANQ96GW7 911 aa23.19■■□□□ 1.3
LIMS2-208ENST00000410011 ZNF608Q9ULD9 1512 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-208ENST00000410011 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
LIMS2-208ENST00000410011 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
LIMS2-208ENST00000410011 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
LIMS2-208ENST00000410011 SPATA31E1Q6ZUB1 1445 aa23.14■■□□□ 1.29
LIMS2-208ENST00000410011 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-208ENST00000410011 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
LIMS2-208ENST00000410011 ERICH6BQ5W0A0 696 aa23.11■■□□□ 1.29
LIMS2-208ENST00000410011 ADGRL2O95490 1459 aa23.09■■□□□ 1.29
LIMS2-208ENST00000410011 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
LIMS2-208ENST00000410011 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-208ENST00000410011 NBPF8Q3BBV2 869 aa23.09■■□□□ 1.29
LIMS2-208ENST00000410011 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-208ENST00000410011 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-208ENST00000410011 ADCY10Q96PN6 1610 aa23.08■■□□□ 1.29
LIMS2-208ENST00000410011 FOXD1Q16676 465 aa23.08■■□□□ 1.29
LIMS2-208ENST00000410011 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
LIMS2-208ENST00000410011 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
LIMS2-208ENST00000410011 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
LIMS2-208ENST00000410011 C11orf95C9JLR9 678 aaPredicted RBP23.07■■□□□ 1.28
LIMS2-208ENST00000410011 PZPP20742 1482 aa23.07■■□□□ 1.28
LIMS2-208ENST00000410011 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
LIMS2-208ENST00000410011 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
LIMS2-208ENST00000410011 ADGBQ8N7X0 1667 aa23.05■■□□□ 1.28
LIMS2-208ENST00000410011 GPATCH8Q9UKJ3 1502 aaKnown RBP23.05■■□□□ 1.28
LIMS2-208ENST00000410011 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
LIMS2-208ENST00000410011 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-208ENST00000410011 CFDP1Q9UEE9 299 aaPredicted RBP23.02■■□□□ 1.28
LIMS2-208ENST00000410011 MBD5Q9P267 1494 aa23.02■■□□□ 1.28
LIMS2-208ENST00000410011 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
LIMS2-208ENST00000410011 RBM19Q9Y4C8 960 aaKnown RBP23■■□□□ 1.27
LIMS2-208ENST00000410011 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
LIMS2-208ENST00000410011 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
LIMS2-208ENST00000410011 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
LIMS2-208ENST00000410011 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
LIMS2-208ENST00000410011 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
LIMS2-208ENST00000410011 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
LIMS2-208ENST00000410011 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
LIMS2-208ENST00000410011 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
LIMS2-208ENST00000410011 PLB1Q6P1J6 1458 aa22.96■■□□□ 1.27
LIMS2-208ENST00000410011 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
LIMS2-208ENST00000410011 NUP160Q12769 1436 aa22.95■■□□□ 1.26
LIMS2-208ENST00000410011 SHANK2Q9UPX8 1470 aa22.93■■□□□ 1.26
LIMS2-208ENST00000410011 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
LIMS2-208ENST00000410011 KIF14Q15058 1648 aa22.92■■□□□ 1.26
LIMS2-208ENST00000410011 MRS2Q9HD23 443 aa22.92■■□□□ 1.26
LIMS2-208ENST00000410011 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
LIMS2-208ENST00000410011 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.26
LIMS2-208ENST00000410011 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
LIMS2-208ENST00000410011 ABCA8O94911 1581 aa22.88■■□□□ 1.25
LIMS2-208ENST00000410011 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
LIMS2-208ENST00000410011 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
LIMS2-208ENST00000410011 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
LIMS2-208ENST00000410011 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
LIMS2-208ENST00000410011 PKD2Q13563 968 aa22.86■■□□□ 1.25
LIMS2-208ENST00000410011 USP47Q96K76 1375 aa22.85■■□□□ 1.25
LIMS2-208ENST00000410011 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
LIMS2-208ENST00000410011 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
LIMS2-208ENST00000410011 PLEKHD1A6NEE1 506 aa22.84■■□□□ 1.25
LIMS2-208ENST00000410011 KDM5CP41229 1560 aa22.84■■□□□ 1.25
LIMS2-208ENST00000410011 CDC42BPAQ5VT25 1732 aa22.83■■□□□ 1.24
LIMS2-208ENST00000410011 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.24
LIMS2-208ENST00000410011 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
LIMS2-208ENST00000410011 ZNF777Q9ULD5 760 aaPredicted RBP22.81■■□□□ 1.24
LIMS2-208ENST00000410011 ATP10BO94823 1461 aa22.81■■□□□ 1.24
LIMS2-208ENST00000410011 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
LIMS2-208ENST00000410011 BCORL1Q5H9F3 1711 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 C9orf84Q5VXU9 1444 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 PTPRGP23470 1445 aa22.8■■□□□ 1.24
LIMS2-208ENST00000410011 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
LIMS2-208ENST00000410011 NUP155O75694 1391 aa22.77■■□□□ 1.23
LIMS2-208ENST00000410011 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
LIMS2-208ENST00000410011 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
LIMS2-208ENST00000410011 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
LIMS2-208ENST00000410011 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
LIMS2-208ENST00000410011 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
LIMS2-208ENST00000410011 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
LIMS2-208ENST00000410011 FBLN2P98095 1184 aa22.7■■□□□ 1.22
LIMS2-208ENST00000410011 RNF123Q5XPI4 1314 aa22.7■■□□□ 1.22
LIMS2-208ENST00000410011 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
LIMS2-208ENST00000410011 CARD11Q9BXL7 1154 aa22.66■■□□□ 1.22
LIMS2-208ENST00000410011 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
LIMS2-208ENST00000410011 NUDCQ9Y266 331 aa22.65■■□□□ 1.22
LIMS2-208ENST00000410011 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
LIMS2-208ENST00000410011 CCDC141Q6ZP82 1450 aa22.64■■□□□ 1.21
LIMS2-208ENST00000410011 MSH5O43196 834 aa22.62■■□□□ 1.21
LIMS2-208ENST00000410011 PREX2Q70Z35 1606 aa22.61■■□□□ 1.21
LIMS2-208ENST00000410011 RALBP1Q15311 655 aa22.6■■□□□ 1.21
LIMS2-208ENST00000410011 BRD4O60885 1362 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-208ENST00000410011 LRPPRCP42704 1394 aaKnown RBP22.6■■□□□ 1.21
LIMS2-208ENST00000410011 FAM135AQ9P2D6 1515 aa22.59■■□□□ 1.21
LIMS2-208ENST00000410011 HNRNPMP52272 730 aaKnown RBP eCLIP22.59■■□□□ 1.21
LIMS2-208ENST00000410011 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1240.8 ms