RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 AFAP1Q8N556 730 aa23.44■■□□□ 1.34
MCF2L-210ENST00000409954 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
MCF2L-210ENST00000409954 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
MCF2L-210ENST00000409954 KIF14Q15058 1648 aa23.42■■□□□ 1.34
MCF2L-210ENST00000409954 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
MCF2L-210ENST00000409954 BCORL1Q5H9F3 1711 aa23.41■■□□□ 1.34
MCF2L-210ENST00000409954 ATP10AO60312 1499 aa23.41■■□□□ 1.34
MCF2L-210ENST00000409954 MLECQ14165 292 aa23.4■■□□□ 1.34
MCF2L-210ENST00000409954 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
MCF2L-210ENST00000409954 ZNF518AQ6AHZ1 1483 aa23.37■■□□□ 1.33
MCF2L-210ENST00000409954 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
MCF2L-210ENST00000409954 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
MCF2L-210ENST00000409954 ILDR1Q86SU0 546 aaPredicted RBP23.34■■□□□ 1.33
MCF2L-210ENST00000409954 MADDQ8WXG6 1647 aa23.33■■□□□ 1.32
MCF2L-210ENST00000409954 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.32
MCF2L-210ENST00000409954 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
MCF2L-210ENST00000409954 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
MCF2L-210ENST00000409954 LRRIQ1Q96JM4 1722 aa23.29■■□□□ 1.32
MCF2L-210ENST00000409954 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
MCF2L-210ENST00000409954 MLH3Q9UHC1 1453 aa23.28■■□□□ 1.32
MCF2L-210ENST00000409954 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
MCF2L-210ENST00000409954 TRAPPC8Q9Y2L5 1435 aa23.25■■□□□ 1.31
MCF2L-210ENST00000409954 KDM5CP41229 1560 aa23.25■■□□□ 1.31
MCF2L-210ENST00000409954 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
MCF2L-210ENST00000409954 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
MCF2L-210ENST00000409954 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
MCF2L-210ENST00000409954 CDC42BPBQ9Y5S2 1711 aa23.22■■□□□ 1.31
MCF2L-210ENST00000409954 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.31
MCF2L-210ENST00000409954 ESF1Q9H501 851 aaKnown RBP23.22■■□□□ 1.31
MCF2L-210ENST00000409954 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
MCF2L-210ENST00000409954 ARHGEF12Q9NZN5 1544 aa23.22■■□□□ 1.31
MCF2L-210ENST00000409954 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
MCF2L-210ENST00000409954 PREX2Q70Z35 1606 aa23.2■■□□□ 1.3
MCF2L-210ENST00000409954 CEBPAP49715 358 aaPredicted RBP23.19■■□□□ 1.3
MCF2L-210ENST00000409954 HSPA2P54652 639 aa23.19■■□□□ 1.3
MCF2L-210ENST00000409954 KIAA1107Q9UPP5 1409 aa23.18■■□□□ 1.3
MCF2L-210ENST00000409954 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
MCF2L-210ENST00000409954 ABCC1P33527 1531 aa23.18■■□□□ 1.3
MCF2L-210ENST00000409954 SIGLEC1Q9BZZ2 1709 aa23.17■■□□□ 1.3
MCF2L-210ENST00000409954 CEP162Q5TB80 1403 aa23.16■■□□□ 1.3
MCF2L-210ENST00000409954 PLEKHH2Q8IVE3 1493 aa23.15■■□□□ 1.3
MCF2L-210ENST00000409954 REREQ9P2R6 1566 aa23.14■■□□□ 1.3
MCF2L-210ENST00000409954 AGLP35573 1532 aa23.13■■□□□ 1.29
MCF2L-210ENST00000409954 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
MCF2L-210ENST00000409954 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
MCF2L-210ENST00000409954 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
MCF2L-210ENST00000409954 FBXO41Q8TF61 875 aa23.11■■□□□ 1.29
MCF2L-210ENST00000409954 FER1L4A9Z1Z3 1794 aa23.09■■□□□ 1.29
MCF2L-210ENST00000409954 RSPH4AQ5TD94 716 aa23.08■■□□□ 1.29
MCF2L-210ENST00000409954 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.29
MCF2L-210ENST00000409954 ITSN2Q9NZM3 1697 aa23.07■■□□□ 1.28
MCF2L-210ENST00000409954 SAMD9LQ8IVG5 1584 aa23.07■■□□□ 1.28
MCF2L-210ENST00000409954 CNTLNQ9NXG0 1405 aa23.06■■□□□ 1.28
MCF2L-210ENST00000409954 ZNF644Q9H582 1327 aaPredicted RBP23.06■■□□□ 1.28
MCF2L-210ENST00000409954 ABCA6Q8N139 1617 aa23.05■■□□□ 1.28
MCF2L-210ENST00000409954 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
MCF2L-210ENST00000409954 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
MCF2L-210ENST00000409954 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
MCF2L-210ENST00000409954 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
MCF2L-210ENST00000409954 SETD1BQ9UPS6 1966 aaKnown RBP23.02■■□□□ 1.28
MCF2L-210ENST00000409954 EHBP1L1Q8N3D4 1523 aa23.02■■□□□ 1.28
MCF2L-210ENST00000409954 GGT6Q6P531 493 aa22.99■■□□□ 1.27
MCF2L-210ENST00000409954 ZMYM3Q14202 1370 aa22.99■■□□□ 1.27
MCF2L-210ENST00000409954 RTEL1-TNFRSF6BF6WH68 1400 aa22.98■■□□□ 1.27
MCF2L-210ENST00000409954 A2MP01023 1474 aa22.98■■□□□ 1.27
MCF2L-210ENST00000409954 MBD5Q9P267 1494 aa22.98■■□□□ 1.27
MCF2L-210ENST00000409954 ATP7AQ04656 1500 aa22.97■■□□□ 1.27
MCF2L-210ENST00000409954 VPS8Q8N3P4 1428 aa22.94■■□□□ 1.26
MCF2L-210ENST00000409954 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
MCF2L-210ENST00000409954 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
MCF2L-210ENST00000409954 CERKQ8TCT0 537 aa22.94■■□□□ 1.26
MCF2L-210ENST00000409954 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
MCF2L-210ENST00000409954 NCOA2Q15596 1464 aa22.93■■□□□ 1.26
MCF2L-210ENST00000409954 DHX29Q7Z478 1369 aaKnown RBP22.93■■□□□ 1.26
MCF2L-210ENST00000409954 PREX1Q8TCU6 1659 aa22.93■■□□□ 1.26
MCF2L-210ENST00000409954 NPATQ14207 1427 aa22.91■■□□□ 1.26
MCF2L-210ENST00000409954 INO80Q9ULG1 1556 aaPredicted RBP22.88■■□□□ 1.25
MCF2L-210ENST00000409954 KIF3BO15066 747 aa22.87■■□□□ 1.25
MCF2L-210ENST00000409954 C3P01024 1663 aa22.87■■□□□ 1.25
MCF2L-210ENST00000409954 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
MCF2L-210ENST00000409954 APLP2Q06481 763 aa22.86■■□□□ 1.25
MCF2L-210ENST00000409954 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
MCF2L-210ENST00000409954 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
MCF2L-210ENST00000409954 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
MCF2L-210ENST00000409954 PTPRTO14522 1441 aa22.84■■□□□ 1.25
MCF2L-210ENST00000409954 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
MCF2L-210ENST00000409954 CCDC141Q6ZP82 1450 aa22.84■■□□□ 1.25
MCF2L-210ENST00000409954 CAMSAP2Q08AD1 1489 aa22.82■■□□□ 1.24
MCF2L-210ENST00000409954 MROH2AA6NES4 1674 aa22.8■■□□□ 1.24
MCF2L-210ENST00000409954 WASHC2CQ9Y4E1 1318 aa22.8■■□□□ 1.24
MCF2L-210ENST00000409954 ADGBQ8N7X0 1667 aa22.79■■□□□ 1.24
MCF2L-210ENST00000409954 PTPRKQ15262 1439 aa22.79■■□□□ 1.24
MCF2L-210ENST00000409954 MIA2Q96PC5 1412 aa22.78■■□□□ 1.24
MCF2L-210ENST00000409954 PKD2Q13563 968 aa22.77■■□□□ 1.24
MCF2L-210ENST00000409954 STRCQ7RTU9 1775 aa22.76■■□□□ 1.23
MCF2L-210ENST00000409954 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
MCF2L-210ENST00000409954 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
MCF2L-210ENST00000409954 NCKAP5LQ9HCH0 1330 aa22.73■■□□□ 1.23
MCF2L-210ENST00000409954 MYOM3Q5VTT5 1437 aa22.73■■□□□ 1.23
MCF2L-210ENST00000409954 FBXO31Q5XUX0 539 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms