RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 CFAP44Q96MT7 982 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 FGD5Q6ZNL6 1462 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 IGF1RP08069 1367 aa4.54□□□□□ -1.68
CUL3-204ENST00000409777 ABCA5Q8WWZ7 1642 aa4.54□□□□□ -1.68
CUL3-204ENST00000409777 PPP1R15AO75807 674 aaPredicted RBP4.54□□□□□ -1.68
CUL3-204ENST00000409777 HECW1Q76N89 1606 aa4.54□□□□□ -1.68
CUL3-204ENST00000409777 SNAPC4Q5SXM2 1469 aa4.54□□□□□ -1.68
CUL3-204ENST00000409777 PTPN23Q9H3S7 1636 aa4.53□□□□□ -1.68
CUL3-204ENST00000409777 YTHDC1Q96MU7 727 aaKnown RBP4.53□□□□□ -1.68
CUL3-204ENST00000409777 FHAD1B1AJZ9 1412 aa4.53□□□□□ -1.68
CUL3-204ENST00000409777 CASKIN1Q8WXD9 1431 aa4.53□□□□□ -1.68
CUL3-204ENST00000409777 ANP32EQ9BTT0 268 aa4.53□□□□□ -1.68
CUL3-204ENST00000409777 PHLDB1Q86UU1 1377 aa4.53□□□□□ -1.68
CUL3-204ENST00000409777 CCER2I3L3R5 266 aa4.52□□□□□ -1.69
CUL3-204ENST00000409777 ABCA10Q8WWZ4 1543 aa4.52□□□□□ -1.69
CUL3-204ENST00000409777 DNMBPQ6XZF7 1577 aa4.52□□□□□ -1.69
CUL3-204ENST00000409777 NCOA2Q15596 1464 aa4.52□□□□□ -1.69
CUL3-204ENST00000409777 HOMEZQ8IX15 550 aa4.52□□□□□ -1.69
CUL3-204ENST00000409777 SPOCK2Q92563 424 aa4.52□□□□□ -1.69
CUL3-204ENST00000409777 TMEM132AQ24JP5 1023 aa4.51□□□□□ -1.69
CUL3-204ENST00000409777 ZNF692Q9BU19 519 aaPredicted RBP4.51□□□□□ -1.69
CUL3-204ENST00000409777 HFM1A2PYH4 1435 aa4.51□□□□□ -1.69
CUL3-204ENST00000409777 AKNAQ7Z591 1439 aa4.51□□□□□ -1.69
CUL3-204ENST00000409777 TCOF1Q13428 1488 aaKnown RBP4.51□□□□□ -1.69
CUL3-204ENST00000409777 DENND4BO75064 1496 aaPredicted RBP4.5□□□□□ -1.69
CUL3-204ENST00000409777 GRIN2BQ13224 1484 aa4.5□□□□□ -1.69
CUL3-204ENST00000409777 UACAQ9BZF9 1416 aa4.49□□□□□ -1.69
CUL3-204ENST00000409777 UGGT2Q9NYU1 1516 aa4.49□□□□□ -1.69
CUL3-204ENST00000409777 HAX1O00165 279 aa4.49□□□□□ -1.69
CUL3-204ENST00000409777 PABPN1Q86U42 306 aaKnown RBP eCLIP4.49□□□□□ -1.69
CUL3-204ENST00000409777 SUPT6HQ7KZ85 1726 aaKnown RBP4.49□□□□□ -1.69
CUL3-204ENST00000409777 FGD6Q6ZV73 1430 aa4.49□□□□□ -1.69
CUL3-204ENST00000409777 EHBP1L1Q8N3D4 1523 aa4.49□□□□□ -1.69
CUL3-204ENST00000409777 CARMIL1Q5VZK9 1371 aa4.48□□□□□ -1.69
CUL3-204ENST00000409777 BBXQ8WY36 941 aaPredicted RBP4.48□□□□□ -1.69
CUL3-204ENST00000409777 CADPSQ9ULU8 1353 aa4.48□□□□□ -1.69
CUL3-204ENST00000409777 CCDC18Q5T9S5 1454 aa4.48□□□□□ -1.69
CUL3-204ENST00000409777 PTPRKQ15262 1439 aa4.47□□□□□ -1.69
CUL3-204ENST00000409777 PRKAR2AP13861 404 aaKnown RBP4.47□□□□□ -1.69
CUL3-204ENST00000409777 KCNH8Q96L42 1107 aa4.47□□□□□ -1.69
CUL3-204ENST00000409777 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.47□□□□□ -1.69
CUL3-204ENST00000409777 NAIPQ13075 1403 aa4.47□□□□□ -1.69
CUL3-204ENST00000409777 C14orf37Q86TY3 774 aa4.46□□□□□ -1.69
CUL3-204ENST00000409777 PODXL2Q9NZ53 605 aa4.46□□□□□ -1.69
CUL3-204ENST00000409777 FANCIQ9NVI1 1328 aa4.46□□□□□ -1.7
CUL3-204ENST00000409777 ERICH6BQ5W0A0 696 aa4.46□□□□□ -1.7
CUL3-204ENST00000409777 TOPBP1Q92547 1522 aa4.46□□□□□ -1.7
CUL3-204ENST00000409777 FMN1Q68DA7 1419 aa4.46□□□□□ -1.7
CUL3-204ENST00000409777 MAGI3Q5TCQ9 1506 aa4.45□□□□□ -1.7
CUL3-204ENST00000409777 POLA1P09884 1462 aaPredicted RBP4.45□□□□□ -1.7
CUL3-204ENST00000409777 MYOM3Q5VTT5 1437 aa4.45□□□□□ -1.7
CUL3-204ENST00000409777 KDM6BO15054 1643 aa4.44□□□□□ -1.7
CUL3-204ENST00000409777 NBR1Q14596 966 aa4.44□□□□□ -1.7
CUL3-204ENST00000409777 LAMC3Q9Y6N6 1575 aa4.44□□□□□ -1.7
CUL3-204ENST00000409777 TARBP1Q13395 1621 aaKnown RBP4.44□□□□□ -1.7
CUL3-204ENST00000409777 PRR29P0C7W0 189 aa4.44□□□□□ -1.7
CUL3-204ENST00000409777 FANCD2Q9BXW9 1451 aa4.44□□□□□ -1.7
CUL3-204ENST00000409777 MBD5Q9P267 1494 aa4.44□□□□□ -1.7
CUL3-204ENST00000409777 ZBTB47Q9UFB7 747 aaPredicted RBP4.43□□□□□ -1.7
CUL3-204ENST00000409777 RBM19Q9Y4C8 960 aaKnown RBP4.43□□□□□ -1.7
CUL3-204ENST00000409777 TEX14Q8IWB6 1497 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 CROCC2H7BZ55 1655 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 NCOA1Q15788 1441 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 FHOD3Q2V2M9 1422 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 ECM2O94769 699 aaPredicted RBP4.43□□□□□ -1.7
CUL3-204ENST00000409777 DNMT1P26358 1616 aaKnown RBP4.43□□□□□ -1.7
CUL3-204ENST00000409777 E9PCH4 1651 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 PBRM1Q86U86 1689 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 SPATA31E1Q6ZUB1 1445 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 SOCS7O14512 581 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 RGL2O15211 777 aa4.43□□□□□ -1.7
CUL3-204ENST00000409777 CNTLNQ9NXG0 1405 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 WDR62O43379 1518 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 KLHL34Q8N239 644 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 BCL11AQ9H165 835 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 ADGBQ8N7X0 1667 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 NESP48681 1621 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 ADCY10Q96PN6 1610 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 MIA2Q96PC5 1412 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 ERCC6L2Q5T890 1561 aa4.42□□□□□ -1.7
CUL3-204ENST00000409777 SPRYD3Q8NCJ5 442 aa4.41□□□□□ -1.7
CUL3-204ENST00000409777 SIN3AQ96ST3 1273 aa4.41□□□□□ -1.7
CUL3-204ENST00000409777 URB2Q14146 1524 aaKnown RBP4.41□□□□□ -1.7
CUL3-204ENST00000409777 ZNF579Q8NAF0 562 aaKnown RBP4.41□□□□□ -1.7
CUL3-204ENST00000409777 ROCK1Q13464 1354 aa4.41□□□□□ -1.7
CUL3-204ENST00000409777 GABBR2O75899 941 aa4.41□□□□□ -1.7
CUL3-204ENST00000409777 RNF123Q5XPI4 1314 aa4.41□□□□□ -1.7
CUL3-204ENST00000409777 RPRD2Q5VT52 1461 aaKnown RBP4.4□□□□□ -1.7
CUL3-204ENST00000409777 KIF14Q15058 1648 aa4.4□□□□□ -1.7
CUL3-204ENST00000409777 ADAMTS12P58397 1594 aa4.4□□□□□ -1.7
CUL3-204ENST00000409777 DDX10Q13206 875 aaKnown RBP4.4□□□□□ -1.7
CUL3-204ENST00000409777 PLCD3Q8N3E9 789 aa4.4□□□□□ -1.7
CUL3-204ENST00000409777 RAD54L2Q9Y4B4 1467 aa4.4□□□□□ -1.7
CUL3-204ENST00000409777 FARP1Q9Y4F1 1045 aaPredicted RBP4.39□□□□□ -1.71
CUL3-204ENST00000409777 BCORL1Q5H9F3 1711 aa4.39□□□□□ -1.71
CUL3-204ENST00000409777 KDM5CP41229 1560 aa4.39□□□□□ -1.71
CUL3-204ENST00000409777 WASHC2AQ641Q2 1341 aa4.39□□□□□ -1.71
CUL3-204ENST00000409777 KDM5DQ9BY66 1539 aa4.39□□□□□ -1.71
CUL3-204ENST00000409777 ANP32CO43423 234 aa4.39□□□□□ -1.71
CUL3-204ENST00000409777 IQGAP2Q13576 1575 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms