RNA–Protein interactions for RNA: ENST00000409582.7

DYSF-204, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-204ENST00000409582 SAFB2Q14151 953 aaKnown RBP eCLIP19.14■□□□□ 0.65
DYSF-204ENST00000409582 PNNQ9H307 717 aaKnown RBP19.11■□□□□ 0.65
DYSF-204ENST00000409582 NOC3LQ8WTT2 800 aaKnown RBP19.1■□□□□ 0.65
DYSF-204ENST00000409582 GGT6Q6P531 493 aa19.1■□□□□ 0.65
DYSF-204ENST00000409582 MS4A1P11836 297 aa19.08■□□□□ 0.65
DYSF-204ENST00000409582 CHMP4BQ9H444 224 aaKnown RBP19.08■□□□□ 0.65
DYSF-204ENST00000409582 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.64
DYSF-204ENST00000409582 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
DYSF-204ENST00000409582 ANO8Q9HCE9 1232 aaPredicted RBP19.06■□□□□ 0.64
DYSF-204ENST00000409582 CUX2O14529 1486 aa19.05■□□□□ 0.64
DYSF-204ENST00000409582 DCAF11Q8TEB1 546 aa19.05■□□□□ 0.64
DYSF-204ENST00000409582 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
DYSF-204ENST00000409582 KIAA2012Q0VF49 1180 aa19.03■□□□□ 0.64
DYSF-204ENST00000409582 HSP90B1P14625 803 aaKnown RBP19.03■□□□□ 0.64
DYSF-204ENST00000409582 STK26Q9P289 416 aa19.03■□□□□ 0.64
DYSF-204ENST00000409582 TNNT3P45378 269 aaPredicted RBP19.03■□□□□ 0.64
DYSF-204ENST00000409582 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
DYSF-204ENST00000409582 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
DYSF-204ENST00000409582 MORC1Q86VD1 984 aa19.01■□□□□ 0.63
DYSF-204ENST00000409582 ZNF330Q9Y3S2 320 aaPredicted RBP19.01■□□□□ 0.63
DYSF-204ENST00000409582 TMF1P82094 1093 aa19■□□□□ 0.63
DYSF-204ENST00000409582 EEA1Q15075 1411 aa19■□□□□ 0.63
DYSF-204ENST00000409582 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
DYSF-204ENST00000409582 CREBRFQ8IUR6 639 aa19■□□□□ 0.63
DYSF-204ENST00000409582 MFAP1P55081 439 aaKnown RBP19■□□□□ 0.63
DYSF-204ENST00000409582 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
DYSF-204ENST00000409582 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
DYSF-204ENST00000409582 GBP4Q96PP9 640 aa19■□□□□ 0.63
DYSF-204ENST00000409582 PRM3Q9NNZ6 103 aa19■□□□□ 0.63
DYSF-204ENST00000409582 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
DYSF-204ENST00000409582 KANK1Q14678 1352 aa18.98■□□□□ 0.63
DYSF-204ENST00000409582 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
DYSF-204ENST00000409582 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
DYSF-204ENST00000409582 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
DYSF-204ENST00000409582 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
DYSF-204ENST00000409582 A0A0U1RQG5 324 aaPredicted RBP18.95■□□□□ 0.62
DYSF-204ENST00000409582 PAK3O75914 559 aaPredicted RBP18.94■□□□□ 0.62
DYSF-204ENST00000409582 GOLGA6L3A6NEY3 463 aa18.93■□□□□ 0.62
DYSF-204ENST00000409582 FOXD1Q16676 465 aa18.92■□□□□ 0.62
DYSF-204ENST00000409582 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
DYSF-204ENST00000409582 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
DYSF-204ENST00000409582 TRIM6-TRIM34B2RNG4 842 aa18.91■□□□□ 0.62
DYSF-204ENST00000409582 HDGFP51858 240 aaKnown RBP18.9■□□□□ 0.62
DYSF-204ENST00000409582 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
DYSF-204ENST00000409582 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.62
DYSF-204ENST00000409582 TNIKQ9UKE5 1360 aa18.88■□□□□ 0.61
DYSF-204ENST00000409582 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
DYSF-204ENST00000409582 SOGA1O94964 1423 aa18.87■□□□□ 0.61
DYSF-204ENST00000409582 GOLGA6L1Q8N7Z2 621 aa18.86■□□□□ 0.61
DYSF-204ENST00000409582 TPM4P67936 248 aa18.86■□□□□ 0.61
DYSF-204ENST00000409582 SYAP1Q96A49 352 aaPredicted RBP18.85■□□□□ 0.61
DYSF-204ENST00000409582 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
DYSF-204ENST00000409582 PTMSP20962 102 aa18.85■□□□□ 0.61
DYSF-204ENST00000409582 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
DYSF-204ENST00000409582 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
DYSF-204ENST00000409582 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
DYSF-204ENST00000409582 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
DYSF-204ENST00000409582 IPO8O15397 1037 aaKnown RBP18.83■□□□□ 0.61
DYSF-204ENST00000409582 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
DYSF-204ENST00000409582 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
DYSF-204ENST00000409582 FOXD4L6Q3SYB3 417 aaPredicted RBP18.83■□□□□ 0.6
DYSF-204ENST00000409582 FOXD4L3Q6VB84 417 aaPredicted RBP18.83■□□□□ 0.6
DYSF-204ENST00000409582 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
DYSF-204ENST00000409582 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
DYSF-204ENST00000409582 RASSF8Q8NHQ8 419 aa18.82■□□□□ 0.6
DYSF-204ENST00000409582 CSB-PGBD3P0DP91 1061 aa18.82■□□□□ 0.6
DYSF-204ENST00000409582 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
DYSF-204ENST00000409582 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
DYSF-204ENST00000409582 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
DYSF-204ENST00000409582 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
DYSF-204ENST00000409582 SLC4A10Q6U841 1118 aa18.81■□□□□ 0.6
DYSF-204ENST00000409582 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
DYSF-204ENST00000409582 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
DYSF-204ENST00000409582 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
DYSF-204ENST00000409582 SLC4A3P48751 1232 aa18.79■□□□□ 0.6
DYSF-204ENST00000409582 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
DYSF-204ENST00000409582 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
DYSF-204ENST00000409582 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
DYSF-204ENST00000409582 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
DYSF-204ENST00000409582 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
DYSF-204ENST00000409582 PKD2Q13563 968 aa18.78■□□□□ 0.6
DYSF-204ENST00000409582 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
DYSF-204ENST00000409582 PES1O00541 588 aaKnown RBP18.77■□□□□ 0.6
DYSF-204ENST00000409582 TAF7LQ5H9L4 462 aa18.76■□□□□ 0.59
DYSF-204ENST00000409582 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
DYSF-204ENST00000409582 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
DYSF-204ENST00000409582 HSP90AA2PQ14568 343 aaPredicted RBP18.75■□□□□ 0.59
DYSF-204ENST00000409582 CCAR2Q8N163 923 aaKnown RBP18.75■□□□□ 0.59
DYSF-204ENST00000409582 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
DYSF-204ENST00000409582 HNRNPMP52272 730 aaKnown RBP eCLIP18.75■□□□□ 0.59
DYSF-204ENST00000409582 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
DYSF-204ENST00000409582 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
DYSF-204ENST00000409582 KIF3BO15066 747 aa18.74■□□□□ 0.59
DYSF-204ENST00000409582 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
DYSF-204ENST00000409582 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
DYSF-204ENST00000409582 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
DYSF-204ENST00000409582 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.73■□□□□ 0.59
DYSF-204ENST00000409582 GPATCH3Q96I76 525 aa18.72■□□□□ 0.59
DYSF-204ENST00000409582 CYB5RLQ6IPT4 315 aa18.72■□□□□ 0.59
DYSF-204ENST00000409582 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms