RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 KDM4FA0A1W2PPD8 638 aa28.34■■■□□ 2.13
PDLIM2-206ENST00000409141 CDC42BPBQ9Y5S2 1711 aa28.34■■■□□ 2.13
PDLIM2-206ENST00000409141 CCNB3Q8WWL7 1395 aa28.33■■■□□ 2.13
PDLIM2-206ENST00000409141 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
PDLIM2-206ENST00000409141 EHBP1L1Q8N3D4 1523 aa28.32■■■□□ 2.12
PDLIM2-206ENST00000409141 RICTORQ6R327 1708 aa28.32■■■□□ 2.12
PDLIM2-206ENST00000409141 ZNF777Q9ULD5 760 aaPredicted RBP28.31■■■□□ 2.12
PDLIM2-206ENST00000409141 GPATCH8Q9UKJ3 1502 aaKnown RBP28.31■■■□□ 2.12
PDLIM2-206ENST00000409141 TIAM1Q13009 1591 aa28.31■■■□□ 2.12
PDLIM2-206ENST00000409141 POGZQ7Z3K3 1410 aa28.3■■■□□ 2.12
PDLIM2-206ENST00000409141 CDC42BPAQ5VT25 1732 aa28.28■■■□□ 2.12
PDLIM2-206ENST00000409141 CFDP1Q9UEE9 299 aaPredicted RBP28.28■■■□□ 2.12
PDLIM2-206ENST00000409141 APLP2Q06481 763 aa28.25■■■□□ 2.11
PDLIM2-206ENST00000409141 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
PDLIM2-206ENST00000409141 ZMYM4Q5VZL5 1548 aa28.23■■■□□ 2.11
PDLIM2-206ENST00000409141 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
PDLIM2-206ENST00000409141 KANK4Q5T7N3 995 aaPredicted RBP28.21■■■□□ 2.11
PDLIM2-206ENST00000409141 ZNF518AQ6AHZ1 1483 aa28.21■■■□□ 2.11
PDLIM2-206ENST00000409141 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
PDLIM2-206ENST00000409141 MAGI2Q86UL8 1455 aa28.21■■■□□ 2.11
PDLIM2-206ENST00000409141 MYT1LQ9UL68 1186 aa28.21■■■□□ 2.11
PDLIM2-206ENST00000409141 NCOA2Q15596 1464 aa28.19■■■□□ 2.1
PDLIM2-206ENST00000409141 YEATS2Q9ULM3 1422 aa28.19■■■□□ 2.1
PDLIM2-206ENST00000409141 ARID4BQ4LE39 1312 aaPredicted RBP28.19■■■□□ 2.1
PDLIM2-206ENST00000409141 ABCC1P33527 1531 aa28.19■■■□□ 2.1
PDLIM2-206ENST00000409141 ZFYVE16Q7Z3T8 1539 aa28.19■■■□□ 2.1
PDLIM2-206ENST00000409141 ARHGEF12Q9NZN5 1544 aa28.19■■■□□ 2.1
PDLIM2-206ENST00000409141 SUPT6HQ7KZ85 1726 aaKnown RBP28.18■■■□□ 2.1
PDLIM2-206ENST00000409141 ARHGEF40Q8TER5 1519 aa28.17■■■□□ 2.1
PDLIM2-206ENST00000409141 TRAPPC8Q9Y2L5 1435 aa28.17■■■□□ 2.1
PDLIM2-206ENST00000409141 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
PDLIM2-206ENST00000409141 SAMD9LQ8IVG5 1584 aa28.15■■■□□ 2.1
PDLIM2-206ENST00000409141 PLEKHH2Q8IVE3 1493 aa28.12■■■□□ 2.09
PDLIM2-206ENST00000409141 KDM5CP41229 1560 aa28.12■■■□□ 2.09
PDLIM2-206ENST00000409141 ITSN2Q9NZM3 1697 aa28.12■■■□□ 2.09
PDLIM2-206ENST00000409141 ZNF644Q9H582 1327 aaPredicted RBP28.11■■■□□ 2.09
PDLIM2-206ENST00000409141 KIAA1107Q9UPP5 1409 aa28.11■■■□□ 2.09
PDLIM2-206ENST00000409141 SYCP2Q9BX26 1530 aa28.1■■■□□ 2.09
PDLIM2-206ENST00000409141 ATP10AO60312 1499 aa28.09■■■□□ 2.09
PDLIM2-206ENST00000409141 MLH3Q9UHC1 1453 aa28.07■■■□□ 2.08
PDLIM2-206ENST00000409141 HECW2Q9P2P5 1572 aa28.05■■■□□ 2.08
PDLIM2-206ENST00000409141 SPAG9O60271 1321 aaKnown RBP28.04■■■□□ 2.08
PDLIM2-206ENST00000409141 C9orf84Q5VXU9 1444 aa28.03■■■□□ 2.08
PDLIM2-206ENST00000409141 MLECQ14165 292 aa27.99■■■□□ 2.07
PDLIM2-206ENST00000409141 BCORL1Q5H9F3 1711 aa27.98■■■□□ 2.07
PDLIM2-206ENST00000409141 DIP2CQ9Y2E4 1556 aa27.98■■■□□ 2.07
PDLIM2-206ENST00000409141 CAMSAP2Q08AD1 1489 aa27.98■■■□□ 2.07
PDLIM2-206ENST00000409141 MBD5Q9P267 1494 aa27.98■■■□□ 2.07
PDLIM2-206ENST00000409141 MYOM3Q5VTT5 1437 aa27.96■■■□□ 2.07
PDLIM2-206ENST00000409141 SIGLEC1Q9BZZ2 1709 aa27.96■■■□□ 2.07
PDLIM2-206ENST00000409141 ADAMTSL3P82987 1691 aa27.96■■■□□ 2.07
PDLIM2-206ENST00000409141 KIDINS220Q9ULH0 1771 aa27.95■■■□□ 2.06
PDLIM2-206ENST00000409141 RSPH4AQ5TD94 716 aa27.95■■■□□ 2.06
PDLIM2-206ENST00000409141 ABCA6Q8N139 1617 aa27.94■■■□□ 2.06
PDLIM2-206ENST00000409141 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
PDLIM2-206ENST00000409141 ATP7AQ04656 1500 aa27.9■■■□□ 2.06
PDLIM2-206ENST00000409141 REREQ9P2R6 1566 aa27.89■■■□□ 2.05
PDLIM2-206ENST00000409141 MADDQ8WXG6 1647 aa27.88■■■□□ 2.05
PDLIM2-206ENST00000409141 PTPRMP28827 1452 aa27.88■■■□□ 2.05
PDLIM2-206ENST00000409141 CCDC141Q6ZP82 1450 aa27.88■■■□□ 2.05
PDLIM2-206ENST00000409141 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
PDLIM2-206ENST00000409141 TSPY4P0CV99 314 aa27.86■■■□□ 2.05
PDLIM2-206ENST00000409141 TSPY10P0CW01 314 aa27.86■■■□□ 2.05
PDLIM2-206ENST00000409141 RTEL1-TNFRSF6BF6WH68 1400 aa27.85■■■□□ 2.05
PDLIM2-206ENST00000409141 AGLP35573 1532 aa27.82■■■□□ 2.04
PDLIM2-206ENST00000409141 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
PDLIM2-206ENST00000409141 RIMS1Q86UR5 1692 aaKnown RBP27.81■■■□□ 2.04
PDLIM2-206ENST00000409141 A2MP01023 1474 aa27.8■■■□□ 2.04
PDLIM2-206ENST00000409141 PLPPR3Q6T4P5 718 aa27.79■■■□□ 2.04
PDLIM2-206ENST00000409141 FGD6Q6ZV73 1430 aa27.78■■■□□ 2.04
PDLIM2-206ENST00000409141 ESF1Q9H501 851 aaKnown RBP27.76■■■□□ 2.04
PDLIM2-206ENST00000409141 PTPN23Q9H3S7 1636 aa27.75■■■□□ 2.03
PDLIM2-206ENST00000409141 FER1L4A9Z1Z3 1794 aa27.75■■■□□ 2.03
PDLIM2-206ENST00000409141 PPARGC1BQ86YN6 1023 aaKnown RBP27.75■■■□□ 2.03
PDLIM2-206ENST00000409141 DHX29Q7Z478 1369 aaKnown RBP27.73■■■□□ 2.03
PDLIM2-206ENST00000409141 ADGBQ8N7X0 1667 aa27.73■■■□□ 2.03
PDLIM2-206ENST00000409141 PLXNC1O60486 1568 aa27.71■■■□□ 2.03
PDLIM2-206ENST00000409141 TCOF1Q13428 1488 aaKnown RBP27.7■■■□□ 2.02
PDLIM2-206ENST00000409141 GGT6Q6P531 493 aa27.7■■■□□ 2.02
PDLIM2-206ENST00000409141 CEBPAP49715 358 aaPredicted RBP27.68■■■□□ 2.02
PDLIM2-206ENST00000409141 FAM50AQ14320 339 aaKnown RBP27.68■■■□□ 2.02
PDLIM2-206ENST00000409141 ABCC5O15440 1437 aa27.67■■■□□ 2.02
PDLIM2-206ENST00000409141 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
PDLIM2-206ENST00000409141 KIF3BO15066 747 aa27.65■■■□□ 2.02
PDLIM2-206ENST00000409141 DAPK1P53355 1430 aa27.63■■■□□ 2.01
PDLIM2-206ENST00000409141 CNTLNQ9NXG0 1405 aa27.62■■■□□ 2.01
PDLIM2-206ENST00000409141 PPP6R1Q9UPN7 881 aa27.6■■■□□ 2.01
PDLIM2-206ENST00000409141 SHANK2Q9UPX8 1470 aa27.59■■■□□ 2.01
PDLIM2-206ENST00000409141 CHIC2Q9UKJ5 165 aa27.59■■■□□ 2.01
PDLIM2-206ENST00000409141 DNMT1P26358 1616 aaKnown RBP27.59■■■□□ 2.01
PDLIM2-206ENST00000409141 RRP7BPQ9NSQ0 103 aa27.57■■■□□ 2
PDLIM2-206ENST00000409141 CROCC2H7BZ55 1655 aa27.55■■■□□ 2
PDLIM2-206ENST00000409141 ZMYM3Q14202 1370 aa27.55■■■□□ 2
PDLIM2-206ENST00000409141 KIF15Q9NS87 1388 aa27.53■■■□□ 2
PDLIM2-206ENST00000409141 ANKRD30AQ9BXX3 1397 aa27.52■■■□□ 2
PDLIM2-206ENST00000409141 C3P01024 1663 aa27.51■■□□□ 1.99
PDLIM2-206ENST00000409141 DUOX2Q9NRD8 1548 aa27.51■■□□□ 1.99
PDLIM2-206ENST00000409141 CLTCQ00610 1675 aaKnown RBP27.5■■□□□ 1.99
PDLIM2-206ENST00000409141 LMTK3Q96Q04 1460 aa27.5■■□□□ 1.99
PDLIM2-206ENST00000409141 WASHC2CQ9Y4E1 1318 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms