RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
NIF3L1-203ENST00000409129 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
NIF3L1-203ENST00000409129 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
NIF3L1-203ENST00000409129 DENND4BO75064 1496 aaPredicted RBP15.35■□□□□ 0.05
NIF3L1-203ENST00000409129 ZMYM4Q5VZL5 1548 aa15.35■□□□□ 0.05
NIF3L1-203ENST00000409129 POGZQ7Z3K3 1410 aa15.33■□□□□ 0.04
NIF3L1-203ENST00000409129 HECW1Q76N89 1606 aa15.32■□□□□ 0.04
NIF3L1-203ENST00000409129 AKNAQ7Z591 1439 aa15.32■□□□□ 0.04
NIF3L1-203ENST00000409129 EFCAB5A4FU69 1503 aa15.32■□□□□ 0.04
NIF3L1-203ENST00000409129 CFAP74Q9C0B2 1584 aa15.32■□□□□ 0.04
NIF3L1-203ENST00000409129 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
NIF3L1-203ENST00000409129 NUP153P49790 1475 aaKnown RBP15.3■□□□□ 0.04
NIF3L1-203ENST00000409129 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
NIF3L1-203ENST00000409129 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
NIF3L1-203ENST00000409129 PLEKHD1A6NEE1 506 aa15.28■□□□□ 0.04
NIF3L1-203ENST00000409129 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
NIF3L1-203ENST00000409129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.04
NIF3L1-203ENST00000409129 SETD1BQ9UPS6 1966 aaKnown RBP15.27■□□□□ 0.04
NIF3L1-203ENST00000409129 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
NIF3L1-203ENST00000409129 C3P01024 1663 aa15.25■□□□□ 0.03
NIF3L1-203ENST00000409129 KCNA4P22459 653 aa15.24■□□□□ 0.03
NIF3L1-203ENST00000409129 UHRF1BP1Q6BDS2 1440 aa15.21■□□□□ 0.03
NIF3L1-203ENST00000409129 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
NIF3L1-203ENST00000409129 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
NIF3L1-203ENST00000409129 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
NIF3L1-203ENST00000409129 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
NIF3L1-203ENST00000409129 PTPRTO14522 1441 aa15.18■□□□□ 0.02
NIF3L1-203ENST00000409129 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
NIF3L1-203ENST00000409129 ATP10AO60312 1499 aa15.17■□□□□ 0.02
NIF3L1-203ENST00000409129 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
NIF3L1-203ENST00000409129 SCAPERQ9BY12 1400 aa15.16■□□□□ 0.02
NIF3L1-203ENST00000409129 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
NIF3L1-203ENST00000409129 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
NIF3L1-203ENST00000409129 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
NIF3L1-203ENST00000409129 MED1Q15648 1581 aaPredicted RBP15.13■□□□□ 0.01
NIF3L1-203ENST00000409129 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
NIF3L1-203ENST00000409129 DIP2CQ9Y2E4 1556 aa15.11■□□□□ 0.01
NIF3L1-203ENST00000409129 ABCA6Q8N139 1617 aa15.11■□□□□ 0.01
NIF3L1-203ENST00000409129 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
NIF3L1-203ENST00000409129 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
NIF3L1-203ENST00000409129 PLCH2O75038 1416 aa15.1■□□□□ 0.01
NIF3L1-203ENST00000409129 NCOA1Q15788 1441 aa15.1■□□□□ 0.01
NIF3L1-203ENST00000409129 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-203ENST00000409129 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
NIF3L1-203ENST00000409129 KIF14Q15058 1648 aa15.08■□□□□ 0
NIF3L1-203ENST00000409129 UBAP1LF5GYI3 381 aa15.08■□□□□ 0
NIF3L1-203ENST00000409129 KDM5CP41229 1560 aa15.07■□□□□ 0
NIF3L1-203ENST00000409129 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
NIF3L1-203ENST00000409129 ZNF335Q9H4Z2 1342 aaPredicted RBP15.07■□□□□ 0
NIF3L1-203ENST00000409129 REREQ9P2R6 1566 aa15.03■□□□□ -0
NIF3L1-203ENST00000409129 ZNF518AQ6AHZ1 1483 aa15.02■□□□□ -0
NIF3L1-203ENST00000409129 TROQ12816 1431 aaPredicted RBP15.02■□□□□ -0
NIF3L1-203ENST00000409129 TRAPPC8Q9Y2L5 1435 aa15.02■□□□□ -0
NIF3L1-203ENST00000409129 AFAP1Q8N556 730 aa15.02■□□□□ -0
NIF3L1-203ENST00000409129 CDC42BPBQ9Y5S2 1711 aa15.02□□□□□ -0.01
NIF3L1-203ENST00000409129 NCKAP5LQ9HCH0 1330 aa15.01□□□□□ -0.01
NIF3L1-203ENST00000409129 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
NIF3L1-203ENST00000409129 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
NIF3L1-203ENST00000409129 CLIP1P30622 1438 aa15□□□□□ -0.01
NIF3L1-203ENST00000409129 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
NIF3L1-203ENST00000409129 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
NIF3L1-203ENST00000409129 HSPA1LP34931 641 aa14.99□□□□□ -0.01
NIF3L1-203ENST00000409129 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
NIF3L1-203ENST00000409129 MROH2AA6NES4 1674 aa14.99□□□□□ -0.01
NIF3L1-203ENST00000409129 KIDINS220Q9ULH0 1771 aa14.98□□□□□ -0.01
NIF3L1-203ENST00000409129 ITSN2Q9NZM3 1697 aa14.98□□□□□ -0.01
NIF3L1-203ENST00000409129 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-203ENST00000409129 AGLP35573 1532 aa14.97□□□□□ -0.01
NIF3L1-203ENST00000409129 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
NIF3L1-203ENST00000409129 CASKIN1Q8WXD9 1431 aa14.96□□□□□ -0.01
NIF3L1-203ENST00000409129 PIP4K2BP78356 416 aa14.94□□□□□ -0.02
NIF3L1-203ENST00000409129 CCDC18Q5T9S5 1454 aa14.94□□□□□ -0.02
NIF3L1-203ENST00000409129 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
NIF3L1-203ENST00000409129 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
NIF3L1-203ENST00000409129 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-203ENST00000409129 MLH3Q9UHC1 1453 aa14.92□□□□□ -0.02
NIF3L1-203ENST00000409129 ABCC1P33527 1531 aa14.92□□□□□ -0.02
NIF3L1-203ENST00000409129 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
NIF3L1-203ENST00000409129 PREX2Q70Z35 1606 aa14.91□□□□□ -0.02
NIF3L1-203ENST00000409129 ALKQ9UM73 1620 aa14.91□□□□□ -0.02
NIF3L1-203ENST00000409129 NPATQ14207 1427 aa14.9□□□□□ -0.02
NIF3L1-203ENST00000409129 CNTLNQ9NXG0 1405 aa14.9□□□□□ -0.02
NIF3L1-203ENST00000409129 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
NIF3L1-203ENST00000409129 CDC42BPAQ5VT25 1732 aa14.88□□□□□ -0.03
NIF3L1-203ENST00000409129 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
NIF3L1-203ENST00000409129 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
NIF3L1-203ENST00000409129 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
NIF3L1-203ENST00000409129 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
NIF3L1-203ENST00000409129 DNMT1P26358 1616 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-203ENST00000409129 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
NIF3L1-203ENST00000409129 ZNF777Q9ULD5 760 aaPredicted RBP14.84□□□□□ -0.03
NIF3L1-203ENST00000409129 SAMD9LQ8IVG5 1584 aa14.83□□□□□ -0.04
NIF3L1-203ENST00000409129 PKD2Q13563 968 aa14.83□□□□□ -0.04
NIF3L1-203ENST00000409129 STRCP1A6NGW2 1772 aa14.83□□□□□ -0.04
NIF3L1-203ENST00000409129 PTPRKQ15262 1439 aa14.83□□□□□ -0.04
NIF3L1-203ENST00000409129 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
NIF3L1-203ENST00000409129 CPS1P31327 1500 aa14.81□□□□□ -0.04
NIF3L1-203ENST00000409129 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
NIF3L1-203ENST00000409129 HNRNPMP52272 730 aaKnown RBP eCLIP14.8□□□□□ -0.04
NIF3L1-203ENST00000409129 VWDEQ8N2E2 1590 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 316.8 ms