RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 NESP48681 1621 aa10.95□□□□□ -0.66
PBRM1-206ENST00000409114 CHMP4AQ9BY43 222 aa10.95□□□□□ -0.66
PBRM1-206ENST00000409114 VPS8Q8N3P4 1428 aa10.94□□□□□ -0.66
PBRM1-206ENST00000409114 VGFO15240 615 aaPredicted RBP10.94□□□□□ -0.66
PBRM1-206ENST00000409114 UACAQ9BZF9 1416 aa10.94□□□□□ -0.66
PBRM1-206ENST00000409114 EIF3AQ14152 1382 aaKnown RBP10.93□□□□□ -0.66
PBRM1-206ENST00000409114 PHF23Q9BUL5 403 aaPredicted RBP10.93□□□□□ -0.66
PBRM1-206ENST00000409114 SAFB2Q14151 953 aaKnown RBP eCLIP10.93□□□□□ -0.66
PBRM1-206ENST00000409114 ATF3P18847 181 aa10.93□□□□□ -0.66
PBRM1-206ENST00000409114 SYNJ2O15056 1496 aa10.92□□□□□ -0.66
PBRM1-206ENST00000409114 ANP32EQ9BTT0 268 aa10.92□□□□□ -0.66
PBRM1-206ENST00000409114 IGF1RP08069 1367 aa10.91□□□□□ -0.66
PBRM1-206ENST00000409114 SOX12O15370 315 aa10.9□□□□□ -0.66
PBRM1-206ENST00000409114 TERF2IPQ9NYB0 399 aa10.9□□□□□ -0.66
PBRM1-206ENST00000409114 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
PBRM1-206ENST00000409114 FAM9BQ8IZU0 186 aa10.89□□□□□ -0.67
PBRM1-206ENST00000409114 THEMISQ8N1K5 641 aaPredicted RBP10.88□□□□□ -0.67
PBRM1-206ENST00000409114 RTF1Q92541 710 aaKnown RBP10.88□□□□□ -0.67
PBRM1-206ENST00000409114 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
PBRM1-206ENST00000409114 TOPBP1Q92547 1522 aa10.88□□□□□ -0.67
PBRM1-206ENST00000409114 EVA1CP58658 441 aa10.88□□□□□ -0.67
PBRM1-206ENST00000409114 DMRT2Q9Y5R5 561 aa10.88□□□□□ -0.67
PBRM1-206ENST00000409114 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
PBRM1-206ENST00000409114 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
PBRM1-206ENST00000409114 GOLGA2Q08379 1002 aa10.86□□□□□ -0.67
PBRM1-206ENST00000409114 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
PBRM1-206ENST00000409114 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
PBRM1-206ENST00000409114 MORC1Q86VD1 984 aa10.85□□□□□ -0.67
PBRM1-206ENST00000409114 SALL2Q9Y467 1007 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-206ENST00000409114 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
PBRM1-206ENST00000409114 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
PBRM1-206ENST00000409114 SF3B2Q13435 895 aaKnown RBP10.83□□□□□ -0.68
PBRM1-206ENST00000409114 ANP32AP39687 249 aaKnown RBP10.83□□□□□ -0.68
PBRM1-206ENST00000409114 SETD5Q9C0A6 1442 aa10.83□□□□□ -0.68
PBRM1-206ENST00000409114 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
PBRM1-206ENST00000409114 MPHOSPH9Q99550 1183 aa10.82□□□□□ -0.68
PBRM1-206ENST00000409114 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
PBRM1-206ENST00000409114 PLEKHH2Q8IVE3 1493 aa10.81□□□□□ -0.68
PBRM1-206ENST00000409114 ANKLE2Q86XL3 938 aa10.81□□□□□ -0.68
PBRM1-206ENST00000409114 TNNT2P45379 298 aaPredicted RBP10.81□□□□□ -0.68
PBRM1-206ENST00000409114 HMGB2P26583 209 aaKnown RBP10.81□□□□□ -0.68
PBRM1-206ENST00000409114 AMPHP49418 695 aa10.81□□□□□ -0.68
PBRM1-206ENST00000409114 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-206ENST00000409114 CALD1Q05682 793 aaKnown RBP10.8□□□□□ -0.68
PBRM1-206ENST00000409114 MAGI1Q96QZ7 1491 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-206ENST00000409114 PSME1Q06323 249 aa10.8□□□□□ -0.68
PBRM1-206ENST00000409114 PROSER2Q86WR7 435 aaPredicted RBP10.8□□□□□ -0.68
PBRM1-206ENST00000409114 LAS1LQ9Y4W2 734 aaKnown RBP10.8□□□□□ -0.68
PBRM1-206ENST00000409114 SYNJ1O43426 1573 aa10.8□□□□□ -0.68
PBRM1-206ENST00000409114 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
PBRM1-206ENST00000409114 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
PBRM1-206ENST00000409114 MS4A1P11836 297 aa10.78□□□□□ -0.68
PBRM1-206ENST00000409114 NUTM2DQ5VT03 806 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-206ENST00000409114 BICRAQ9NZM4 1560 aa10.78□□□□□ -0.68
PBRM1-206ENST00000409114 ROCK2O75116 1388 aaKnown RBP10.78□□□□□ -0.68
PBRM1-206ENST00000409114 ARHGAP5Q13017 1502 aa10.78□□□□□ -0.68
PBRM1-206ENST00000409114 TXNDC2Q86VQ3 553 aa10.78□□□□□ -0.68
PBRM1-206ENST00000409114 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
PBRM1-206ENST00000409114 KANK4Q5T7N3 995 aaPredicted RBP10.76□□□□□ -0.69
PBRM1-206ENST00000409114 KIAA0586Q9BVV6 1533 aa10.76□□□□□ -0.69
PBRM1-206ENST00000409114 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
PBRM1-206ENST00000409114 FKBP8Q14318 412 aa10.76□□□□□ -0.69
PBRM1-206ENST00000409114 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
PBRM1-206ENST00000409114 G3V3G9 751 aa10.75□□□□□ -0.69
PBRM1-206ENST00000409114 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
PBRM1-206ENST00000409114 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
PBRM1-206ENST00000409114 MSH5O43196 834 aa10.74□□□□□ -0.69
PBRM1-206ENST00000409114 GTF2E1P29083 439 aaPredicted RBP10.74□□□□□ -0.69
PBRM1-206ENST00000409114 EVC2Q86UK5 1308 aa10.74□□□□□ -0.69
PBRM1-206ENST00000409114 FTSJ3Q8IY81 847 aaKnown RBP10.74□□□□□ -0.69
PBRM1-206ENST00000409114 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
PBRM1-206ENST00000409114 NEUROD2Q15784 382 aa10.74□□□□□ -0.69
PBRM1-206ENST00000409114 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
PBRM1-206ENST00000409114 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
PBRM1-206ENST00000409114 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
PBRM1-206ENST00000409114 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
PBRM1-206ENST00000409114 WASHC2AQ641Q2 1341 aa10.72□□□□□ -0.69
PBRM1-206ENST00000409114 KIF15Q9NS87 1388 aa10.72□□□□□ -0.69
PBRM1-206ENST00000409114 SLC52A1Q9NWF4 448 aa10.72□□□□□ -0.69
PBRM1-206ENST00000409114 DHX57Q6P158 1386 aaKnown RBP10.72□□□□□ -0.69
PBRM1-206ENST00000409114 COG3Q96JB2 828 aa10.72□□□□□ -0.69
PBRM1-206ENST00000409114 GPRASP1Q5JY77 1395 aa10.71□□□□□ -0.69
PBRM1-206ENST00000409114 CC2D1BQ5T0F9 858 aaKnown RBP10.71□□□□□ -0.69
PBRM1-206ENST00000409114 CUX1P39880 1505 aa10.71□□□□□ -0.7
PBRM1-206ENST00000409114 SIN3AQ96ST3 1273 aa10.7□□□□□ -0.7
PBRM1-206ENST00000409114 LMOD3Q0VAK6 560 aa10.7□□□□□ -0.7
PBRM1-206ENST00000409114 C1orf141Q5JVX7 400 aa10.7□□□□□ -0.7
PBRM1-206ENST00000409114 HIRIP3Q9BW71 556 aaPredicted RBP10.7□□□□□ -0.7
PBRM1-206ENST00000409114 NBR1Q14596 966 aa10.69□□□□□ -0.7
PBRM1-206ENST00000409114 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
PBRM1-206ENST00000409114 RAPGEF3O95398 923 aa10.69□□□□□ -0.7
PBRM1-206ENST00000409114 CASC1Q6TDU7 716 aa10.69□□□□□ -0.7
PBRM1-206ENST00000409114 SCAPERQ9BY12 1400 aa10.69□□□□□ -0.7
PBRM1-206ENST00000409114 PLB1Q6P1J6 1458 aa10.69□□□□□ -0.7
PBRM1-206ENST00000409114 PPP6R1Q9UPN7 881 aa10.68□□□□□ -0.7
PBRM1-206ENST00000409114 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
PBRM1-206ENST00000409114 LTV1Q96GA3 475 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-206ENST00000409114 ABCA10Q8WWZ4 1543 aa10.68□□□□□ -0.7
PBRM1-206ENST00000409114 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
PBRM1-206ENST00000409114 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms