RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 AAMPQ13685 434 aa3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 NGEFQ8N5V2 710 aa3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 ATP1B4Q9UN42 357 aaPredicted RBP3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 KIF15Q9NS87 1388 aa3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 TCOF1Q13428 1488 aaKnown RBP3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 PLEKHH2Q8IVE3 1493 aa3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 PRDM2Q13029 1718 aa3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 SUPT6HQ7KZ85 1726 aaKnown RBP3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 KIF21AQ7Z4S6 1674 aa3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 EIF5BO60841 1220 aaKnown RBP3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 PTMSP20962 102 aa3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 PDE4AP27815 886 aa3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 BECN1Q14457 450 aa3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 BACH2Q9BYV9 841 aa3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 ISY1Q9ULR0 285 aaKnown RBP3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 EIF3AQ14152 1382 aaKnown RBP3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 RPRD2Q5VT52 1461 aaKnown RBP3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 PCF11O94913 1555 aaKnown RBP3.72□□□□□ -1.81
SNORD88.1-201ENST00000408684 CCDC144AA2RUR9 1427 aa3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 RRP1P56182 461 aaKnown RBP3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 IRX6P78412 446 aaPredicted RBP3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 CENPQQ7L2Z9 268 aaPredicted RBP3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 MPHOSPH9Q99550 1183 aa3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 RCAN3Q9UKA8 241 aa3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 CADPSQ9ULU8 1353 aa3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 GCC2Q8IWJ2 1684 aa3.71□□□□□ -1.82
SNORD88.1-201ENST00000408684 MYBBP1AQ9BQG0 1328 aaKnown RBP3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 ABCA10Q8WWZ4 1543 aa3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 POLR1AO95602 1720 aaPredicted RBP3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 PNISRQ8TF01 805 aaKnown RBP3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 UPF2Q9HAU5 1272 aaKnown RBP3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 ZMYM3Q14202 1370 aa3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 UGGT2Q9NYU1 1516 aa3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 SPATA31E1Q6ZUB1 1445 aa3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 KIF7Q2M1P5 1343 aa3.7□□□□□ -1.82
SNORD88.1-201ENST00000408684 LRPPRCP42704 1394 aaKnown RBP3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 NINLQ9Y2I6 1382 aa3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 PAK3O75914 559 aaPredicted RBP3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 FAM161AQ3B820 660 aa3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 PABPN1Q86U42 306 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 NLRP13Q86W25 1043 aa3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 L3MBTL2Q969R5 705 aa3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 STAC3Q96MF2 364 aa3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 HIRIP3Q9BW71 556 aaPredicted RBP3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 ARHGEF11O15085 1522 aa3.69□□□□□ -1.82
SNORD88.1-201ENST00000408684 CTTNBP2Q8WZ74 1663 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 SNAPC4Q5SXM2 1469 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 ANKRD30BQ9BXX2 1392 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 ANKRD30AQ9BXX3 1397 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 RRP9O43818 475 aaKnown RBP3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 NFKBIBQ15653 356 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 SLC4A1APQ9BWU0 796 aaKnown RBP3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 ANO8Q9HCE9 1232 aaPredicted RBP3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 ARHGEF12Q9NZN5 1544 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 KDM5BQ9UGL1 1544 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 FHOD3Q2V2M9 1422 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 UHRF1BP1Q6BDS2 1440 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 MAPK8IP3Q9UPT6 1336 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 SAMD9Q5K651 1589 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 DNMBPQ6XZF7 1577 aa3.68□□□□□ -1.82
SNORD88.1-201ENST00000408684 GRIN2BQ13224 1484 aa3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 USP47Q96K76 1375 aa3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 CDCA8Q53HL2 280 aa3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 NPM2Q86SE8 214 aaKnown RBP3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 ANP32BQ92688 251 aaKnown RBP3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 CFAP44Q96MT7 982 aa3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 SALL2Q9Y467 1007 aaPredicted RBP3.67□□□□□ -1.82
SNORD88.1-201ENST00000408684 HSP90AA1P07900 732 aaKnown RBP3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 NCLP19338 710 aaKnown RBP3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 RSPH4AQ5TD94 716 aa3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 MTERF4Q7Z6M4 381 aaKnown RBP3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 MAP7D2Q96T17 732 aa3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 KIAA1107Q9UPP5 1409 aa3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 RALGAPBQ86X10 1494 aa3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 TEX14Q8IWB6 1497 aa3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 KIF14Q15058 1648 aa3.66□□□□□ -1.82
SNORD88.1-201ENST00000408684 DHX29Q7Z478 1369 aaKnown RBP3.65□□□□□ -1.82
SNORD88.1-201ENST00000408684 DAPK1P53355 1430 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 PTPRKQ15262 1439 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 TPM2P07951 284 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 SKOR2Q2VWA4 1001 aaPredicted RBP3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 IL27Q8NEV9 243 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 PMFBP1Q8TBY8 1022 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 CARD11Q9BXL7 1154 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 PNNQ9H307 717 aaKnown RBP3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 LAS1LQ9Y4W2 734 aaKnown RBP3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 CAMSAP2Q08AD1 1489 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 GAPVD1Q14C86 1478 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 CGNL1Q0VF96 1302 aa3.65□□□□□ -1.83
SNORD88.1-201ENST00000408684 GOLGA6L3A6NEY3 463 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 DDX11L8A8MPP1 907 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 CLCN1P35523 988 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 MRE11P49959 708 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 TERF1P54274 439 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 HSP90AA2PQ14568 343 aaPredicted RBP3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 WDR43Q15061 677 aaKnown RBP eCLIP3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 NCBP3Q53F19 620 aaKnown RBP3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 P3H3Q8IVL6 736 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 EXOC6Q8TAG9 804 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 FRAT1Q92837 279 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 1771.6 ms