RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
RNF43-201ENST00000407977 PDE3BQ13370 1112 aa16.38■□□□□ 0.21
RNF43-201ENST00000407977 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
RNF43-201ENST00000407977 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
RNF43-201ENST00000407977 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
RNF43-201ENST00000407977 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
RNF43-201ENST00000407977 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
RNF43-201ENST00000407977 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
RNF43-201ENST00000407977 SLKQ9H2G2 1235 aaPredicted RBP16.35■□□□□ 0.21
RNF43-201ENST00000407977 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
RNF43-201ENST00000407977 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
RNF43-201ENST00000407977 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
RNF43-201ENST00000407977 A0A0G2JS52 829 aa16.34■□□□□ 0.21
RNF43-201ENST00000407977 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
RNF43-201ENST00000407977 TNNT3P45378 269 aaPredicted RBP16.32■□□□□ 0.2
RNF43-201ENST00000407977 CSPP1Q1MSJ5 1256 aa16.31■□□□□ 0.2
RNF43-201ENST00000407977 TPM4P67936 248 aa16.29■□□□□ 0.2
RNF43-201ENST00000407977 HSP90AA2PQ14568 343 aaPredicted RBP16.29■□□□□ 0.2
RNF43-201ENST00000407977 CHMP4AQ9BY43 222 aa16.29■□□□□ 0.2
RNF43-201ENST00000407977 KANK1Q14678 1352 aa16.29■□□□□ 0.2
RNF43-201ENST00000407977 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
RNF43-201ENST00000407977 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
RNF43-201ENST00000407977 PHF14O94880 888 aa16.28■□□□□ 0.2
RNF43-201ENST00000407977 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
RNF43-201ENST00000407977 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
RNF43-201ENST00000407977 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.2
RNF43-201ENST00000407977 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.19
RNF43-201ENST00000407977 FANCIQ9NVI1 1328 aa16.26■□□□□ 0.19
RNF43-201ENST00000407977 CCDC34Q96HJ3 373 aa16.25■□□□□ 0.19
RNF43-201ENST00000407977 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
RNF43-201ENST00000407977 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
RNF43-201ENST00000407977 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
RNF43-201ENST00000407977 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
RNF43-201ENST00000407977 RAB3GAP2Q9H2M9 1393 aa16.23■□□□□ 0.19
RNF43-201ENST00000407977 GSE1Q14687 1217 aa16.23■□□□□ 0.19
RNF43-201ENST00000407977 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
RNF43-201ENST00000407977 RTF1Q92541 710 aaKnown RBP16.23■□□□□ 0.19
RNF43-201ENST00000407977 GOLGA6L1Q8N7Z2 621 aa16.23■□□□□ 0.19
RNF43-201ENST00000407977 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
RNF43-201ENST00000407977 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
RNF43-201ENST00000407977 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
RNF43-201ENST00000407977 HMMRO75330 724 aa16.21■□□□□ 0.19
RNF43-201ENST00000407977 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
RNF43-201ENST00000407977 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
RNF43-201ENST00000407977 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.18
RNF43-201ENST00000407977 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
RNF43-201ENST00000407977 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
RNF43-201ENST00000407977 PKD2Q13563 968 aa16.2■□□□□ 0.18
RNF43-201ENST00000407977 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
RNF43-201ENST00000407977 HDGFL2Q7Z4V5 671 aaPredicted RBP16.19■□□□□ 0.18
RNF43-201ENST00000407977 ST18O60284 1047 aa16.19■□□□□ 0.18
RNF43-201ENST00000407977 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
RNF43-201ENST00000407977 TULP1O00294 542 aaPredicted RBP16.18■□□□□ 0.18
RNF43-201ENST00000407977 U2AF1L5P0DN76 240 aaPredicted RBP16.18■□□□□ 0.18
RNF43-201ENST00000407977 U2AF1Q01081 240 aaKnown RBP eCLIP16.18■□□□□ 0.184e-11■□□□□ 10.3
RNF43-201ENST00000407977 FAM161AQ3B820 660 aa16.18■□□□□ 0.18
RNF43-201ENST00000407977 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
RNF43-201ENST00000407977 MPHOSPH9Q99550 1183 aa16.17■□□□□ 0.18
RNF43-201ENST00000407977 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
RNF43-201ENST00000407977 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
RNF43-201ENST00000407977 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
RNF43-201ENST00000407977 PDE4AP27815 886 aa16.16■□□□□ 0.18
RNF43-201ENST00000407977 SOGA1O94964 1423 aa16.16■□□□□ 0.18
RNF43-201ENST00000407977 GPATCH3Q96I76 525 aa16.15■□□□□ 0.18
RNF43-201ENST00000407977 ARID3AQ99856 593 aa16.15■□□□□ 0.18
RNF43-201ENST00000407977 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
RNF43-201ENST00000407977 KIF3AQ9Y496 699 aa16.14■□□□□ 0.17
RNF43-201ENST00000407977 NACADO15069 1562 aa16.14■□□□□ 0.17
RNF43-201ENST00000407977 APBB1O00213 710 aa16.14■□□□□ 0.17
RNF43-201ENST00000407977 NOC3LQ8WTT2 800 aaKnown RBP16.13■□□□□ 0.17
RNF43-201ENST00000407977 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
RNF43-201ENST00000407977 ZBED9Q6R2W3 1325 aa16.12■□□□□ 0.17
RNF43-201ENST00000407977 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
RNF43-201ENST00000407977 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
RNF43-201ENST00000407977 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
RNF43-201ENST00000407977 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
RNF43-201ENST00000407977 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
RNF43-201ENST00000407977 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
RNF43-201ENST00000407977 NPHP1O15259 732 aa16.1■□□□□ 0.17
RNF43-201ENST00000407977 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
RNF43-201ENST00000407977 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
RNF43-201ENST00000407977 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
RNF43-201ENST00000407977 CUX2O14529 1486 aa16.09■□□□□ 0.17
RNF43-201ENST00000407977 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
RNF43-201ENST00000407977 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.16
RNF43-201ENST00000407977 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
RNF43-201ENST00000407977 TPM3P06753 285 aa16.08■□□□□ 0.16
RNF43-201ENST00000407977 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.16
RNF43-201ENST00000407977 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
RNF43-201ENST00000407977 NUP155O75694 1391 aa16.06■□□□□ 0.16
RNF43-201ENST00000407977 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
RNF43-201ENST00000407977 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
RNF43-201ENST00000407977 GPS2Q13227 327 aa16.06■□□□□ 0.16
RNF43-201ENST00000407977 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
RNF43-201ENST00000407977 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
RNF43-201ENST00000407977 TERF2IPQ9NYB0 399 aa16.03■□□□□ 0.16
RNF43-201ENST00000407977 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
RNF43-201ENST00000407977 CLUAP1Q96AJ1 413 aa16.03■□□□□ 0.16
RNF43-201ENST00000407977 FOXD1Q16676 465 aa16.03■□□□□ 0.16
RNF43-201ENST00000407977 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms