RNA–Protein interactions for RNA: ENST00000407847.4

PRDM6-201, Transcript of PR/SET domain 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDM6, Length 9,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-201ENST00000407847 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
PRDM6-201ENST00000407847 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
PRDM6-201ENST00000407847 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
PRDM6-201ENST00000407847 DHX8Q14562 1220 aaKnown RBP18.8■□□□□ 0.6
PRDM6-201ENST00000407847 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
PRDM6-201ENST00000407847 TPM3P06753 285 aa18.79■□□□□ 0.6
PRDM6-201ENST00000407847 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
PRDM6-201ENST00000407847 SUPT16HQ9Y5B9 1047 aaKnown RBP18.78■□□□□ 0.6
PRDM6-201ENST00000407847 AAMPQ13685 434 aa18.77■□□□□ 0.6
PRDM6-201ENST00000407847 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
PRDM6-201ENST00000407847 TMF1P82094 1093 aa18.77■□□□□ 0.59
PRDM6-201ENST00000407847 NGEFQ8N5V2 710 aa18.77■□□□□ 0.59
PRDM6-201ENST00000407847 TPM1P09493 284 aa18.76■□□□□ 0.59
PRDM6-201ENST00000407847 ST18O60284 1047 aa18.75■□□□□ 0.59
PRDM6-201ENST00000407847 HMMRO75330 724 aa18.75■□□□□ 0.59
PRDM6-201ENST00000407847 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
PRDM6-201ENST00000407847 CDR1P51861 262 aa18.74■□□□□ 0.59
PRDM6-201ENST00000407847 ACBD3Q9H3P7 528 aa18.74■□□□□ 0.59
PRDM6-201ENST00000407847 TSR1Q2NL82 804 aaKnown RBP18.73■□□□□ 0.59
PRDM6-201ENST00000407847 SMARCA2P51531 1590 aa18.73■□□□□ 0.59
PRDM6-201ENST00000407847 IPO9Q96P70 1041 aaKnown RBP18.72■□□□□ 0.59
PRDM6-201ENST00000407847 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
PRDM6-201ENST00000407847 CWC15Q9P013 229 aaKnown RBP18.72■□□□□ 0.59
PRDM6-201ENST00000407847 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.7■□□□□ 0.58
PRDM6-201ENST00000407847 LRRFIP1Q32MZ4 808 aaKnown RBP18.7■□□□□ 0.58
PRDM6-201ENST00000407847 FMN1Q68DA7 1419 aa18.69■□□□□ 0.58
PRDM6-201ENST00000407847 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
PRDM6-201ENST00000407847 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
PRDM6-201ENST00000407847 TPM2P07951 284 aa18.68■□□□□ 0.58
PRDM6-201ENST00000407847 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
PRDM6-201ENST00000407847 CEP89Q96ST8 783 aa18.68■□□□□ 0.58
PRDM6-201ENST00000407847 HOOK1Q9UJC3 728 aaKnown RBP18.67■□□□□ 0.58
PRDM6-201ENST00000407847 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
PRDM6-201ENST00000407847 RGS3P49796 1198 aa18.67■□□□□ 0.58
PRDM6-201ENST00000407847 TAF3Q5VWG9 929 aa18.66■□□□□ 0.58
PRDM6-201ENST00000407847 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
PRDM6-201ENST00000407847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
PRDM6-201ENST00000407847 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
PRDM6-201ENST00000407847 UACAQ9BZF9 1416 aa18.65■□□□□ 0.58
PRDM6-201ENST00000407847 KDM2AQ9Y2K7 1162 aa18.64■□□□□ 0.57
PRDM6-201ENST00000407847 ROCK1Q13464 1354 aa18.64■□□□□ 0.57
PRDM6-201ENST00000407847 ARGLU1Q9NWB6 273 aaPredicted RBP18.63■□□□□ 0.57
PRDM6-201ENST00000407847 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
PRDM6-201ENST00000407847 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
PRDM6-201ENST00000407847 SPAG9O60271 1321 aaKnown RBP18.62■□□□□ 0.57
PRDM6-201ENST00000407847 CCDC66A2RUB6 948 aa18.61■□□□□ 0.57
PRDM6-201ENST00000407847 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
PRDM6-201ENST00000407847 IPO7O95373 1038 aaKnown RBP18.6■□□□□ 0.57
PRDM6-201ENST00000407847 MYO6Q9UM54 1294 aa18.6■□□□□ 0.57
PRDM6-201ENST00000407847 CFDP1Q9UEE9 299 aaPredicted RBP18.6■□□□□ 0.57
PRDM6-201ENST00000407847 AK7Q96M32 723 aa18.59■□□□□ 0.57
PRDM6-201ENST00000407847 CUX1P39880 1505 aa18.59■□□□□ 0.57
PRDM6-201ENST00000407847 RDXP35241 583 aaKnown RBP18.59■□□□□ 0.57
PRDM6-201ENST00000407847 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
PRDM6-201ENST00000407847 CCP110O43303 1012 aa18.58■□□□□ 0.56
PRDM6-201ENST00000407847 ISY1Q9ULR0 285 aaKnown RBP18.57■□□□□ 0.56
PRDM6-201ENST00000407847 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
PRDM6-201ENST00000407847 CAGE1Q8TC20 777 aa18.57■□□□□ 0.56
PRDM6-201ENST00000407847 RRP12Q5JTH9 1297 aaKnown RBP18.57■□□□□ 0.56
PRDM6-201ENST00000407847 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
PRDM6-201ENST00000407847 GOLGA6L19H0YKK7 550 aa18.57■□□□□ 0.56
PRDM6-201ENST00000407847 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
PRDM6-201ENST00000407847 FRAT1Q92837 279 aaPredicted RBP18.56■□□□□ 0.56
PRDM6-201ENST00000407847 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
PRDM6-201ENST00000407847 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
PRDM6-201ENST00000407847 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
PRDM6-201ENST00000407847 SCAPERQ9BY12 1400 aa18.54■□□□□ 0.56
PRDM6-201ENST00000407847 CHIC2Q9UKJ5 165 aa18.54■□□□□ 0.56
PRDM6-201ENST00000407847 NPHP1O15259 732 aa18.54■□□□□ 0.56
PRDM6-201ENST00000407847 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
PRDM6-201ENST00000407847 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
PRDM6-201ENST00000407847 CAVIN1Q6NZI2 390 aaKnown RBP18.53■□□□□ 0.56
PRDM6-201ENST00000407847 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
PRDM6-201ENST00000407847 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
PRDM6-201ENST00000407847 POGKQ9P215 609 aa18.52■□□□□ 0.56
PRDM6-201ENST00000407847 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.56
PRDM6-201ENST00000407847 KIF7Q2M1P5 1343 aa18.51■□□□□ 0.55
PRDM6-201ENST00000407847 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
PRDM6-201ENST00000407847 CCDC191Q8NCU4 936 aa18.5■□□□□ 0.55
PRDM6-201ENST00000407847 DIAPH3Q9NSV4 1193 aa18.5■□□□□ 0.55
PRDM6-201ENST00000407847 REC8O95072 547 aa18.5■□□□□ 0.55
PRDM6-201ENST00000407847 HMGN5P82970 282 aaKnown RBP18.5■□□□□ 0.55
PRDM6-201ENST00000407847 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
PRDM6-201ENST00000407847 CLSTN1O94985 981 aa18.49■□□□□ 0.55
PRDM6-201ENST00000407847 HSP90B2PQ58FF3 399 aa18.49■□□□□ 0.55
PRDM6-201ENST00000407847 GSE1Q14687 1217 aa18.49■□□□□ 0.55
PRDM6-201ENST00000407847 NAT10Q9H0A0 1025 aaKnown RBP18.48■□□□□ 0.55
PRDM6-201ENST00000407847 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
PRDM6-201ENST00000407847 TXLNBQ8N3L3 684 aa18.47■□□□□ 0.55
PRDM6-201ENST00000407847 PDIA4P13667 645 aaKnown RBP18.46■□□□□ 0.55
PRDM6-201ENST00000407847 LETM1O95202 739 aaPredicted RBP18.46■□□□□ 0.55
PRDM6-201ENST00000407847 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
PRDM6-201ENST00000407847 RUFY1Q96T51 708 aa18.46■□□□□ 0.55
PRDM6-201ENST00000407847 CGNL1Q0VF96 1302 aa18.45■□□□□ 0.54
PRDM6-201ENST00000407847 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
PRDM6-201ENST00000407847 STK31Q9BXU1 1019 aa18.44■□□□□ 0.54
PRDM6-201ENST00000407847 CARMIL2Q6F5E8 1435 aa18.44■□□□□ 0.54
PRDM6-201ENST00000407847 ZNF771Q7L3S4 317 aaPredicted RBP18.44■□□□□ 0.54
PRDM6-201ENST00000407847 USP8P40818 1118 aa18.43■□□□□ 0.54
PRDM6-201ENST00000407847 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms