RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 CCER1Q8TC90 406 aaPredicted RBP12.46□□□□□ -0.42
NFIA-208ENST00000407417 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
NFIA-208ENST00000407417 NEO1Q92859 1461 aa12.43□□□□□ -0.42
NFIA-208ENST00000407417 ARAP3Q8WWN8 1544 aa12.43□□□□□ -0.42
NFIA-208ENST00000407417 FANCAO15360 1455 aa12.43□□□□□ -0.42
NFIA-208ENST00000407417 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
NFIA-208ENST00000407417 RAPGEF3O95398 923 aa12.42□□□□□ -0.42
NFIA-208ENST00000407417 PLCH2O75038 1416 aa12.42□□□□□ -0.42
NFIA-208ENST00000407417 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
NFIA-208ENST00000407417 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
NFIA-208ENST00000407417 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.43
NFIA-208ENST00000407417 MTUS2Q5JR59 1369 aa12.38□□□□□ -0.43
NFIA-208ENST00000407417 FRMPD1Q5SYB0 1578 aa12.38□□□□□ -0.43
NFIA-208ENST00000407417 MYO5CQ9NQX4 1742 aa12.37□□□□□ -0.43
NFIA-208ENST00000407417 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
NFIA-208ENST00000407417 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
NFIA-208ENST00000407417 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
NFIA-208ENST00000407417 DENND4BO75064 1496 aaPredicted RBP12.37□□□□□ -0.43
NFIA-208ENST00000407417 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
NFIA-208ENST00000407417 SCAPERQ9BY12 1400 aa12.35□□□□□ -0.43
NFIA-208ENST00000407417 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
NFIA-208ENST00000407417 PREX2Q70Z35 1606 aa12.33□□□□□ -0.43
NFIA-208ENST00000407417 CDC42BPBQ9Y5S2 1711 aa12.33□□□□□ -0.44
NFIA-208ENST00000407417 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
NFIA-208ENST00000407417 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
NFIA-208ENST00000407417 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
NFIA-208ENST00000407417 POGZQ7Z3K3 1410 aa12.32□□□□□ -0.44
NFIA-208ENST00000407417 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
NFIA-208ENST00000407417 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
NFIA-208ENST00000407417 CDC42BPAQ5VT25 1732 aa12.32□□□□□ -0.44
NFIA-208ENST00000407417 CCNB3Q8WWL7 1395 aa12.31□□□□□ -0.44
NFIA-208ENST00000407417 ZNF777Q9ULD5 760 aaPredicted RBP12.31□□□□□ -0.44
NFIA-208ENST00000407417 ARHGEF12Q9NZN5 1544 aa12.3□□□□□ -0.44
NFIA-208ENST00000407417 APLP2Q06481 763 aa12.3□□□□□ -0.44
NFIA-208ENST00000407417 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
NFIA-208ENST00000407417 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
NFIA-208ENST00000407417 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
NFIA-208ENST00000407417 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
NFIA-208ENST00000407417 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
NFIA-208ENST00000407417 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
NFIA-208ENST00000407417 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
NFIA-208ENST00000407417 ABCC1P33527 1531 aa12.28□□□□□ -0.44
NFIA-208ENST00000407417 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
NFIA-208ENST00000407417 NCOA2Q15596 1464 aa12.28□□□□□ -0.44
NFIA-208ENST00000407417 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.44
NFIA-208ENST00000407417 ARHGEF40Q8TER5 1519 aa12.27□□□□□ -0.45
NFIA-208ENST00000407417 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
NFIA-208ENST00000407417 ZNF644Q9H582 1327 aaPredicted RBP12.26□□□□□ -0.45
NFIA-208ENST00000407417 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
NFIA-208ENST00000407417 MAP3K1Q13233 1512 aa12.26□□□□□ -0.45
NFIA-208ENST00000407417 HNRNPMP52272 730 aaKnown RBP eCLIP12.26□□□□□ -0.456e-7■■■■□ 25.5
NFIA-208ENST00000407417 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
NFIA-208ENST00000407417 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
NFIA-208ENST00000407417 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
NFIA-208ENST00000407417 SYCP2Q9BX26 1530 aa12.25□□□□□ -0.45
NFIA-208ENST00000407417 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
NFIA-208ENST00000407417 KDM5CP41229 1560 aa12.24□□□□□ -0.45
NFIA-208ENST00000407417 MAGI2Q86UL8 1455 aa12.24□□□□□ -0.45
NFIA-208ENST00000407417 MIER1Q8N108 512 aa12.23□□□□□ -0.45
NFIA-208ENST00000407417 YTHDC1Q96MU7 727 aaKnown RBP12.23□□□□□ -0.45
NFIA-208ENST00000407417 SIGLEC1Q9BZZ2 1709 aa12.22□□□□□ -0.45
NFIA-208ENST00000407417 KIAA1107Q9UPP5 1409 aa12.21□□□□□ -0.45
NFIA-208ENST00000407417 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.45
NFIA-208ENST00000407417 ATP10AO60312 1499 aa12.2□□□□□ -0.46
NFIA-208ENST00000407417 PLEKHH2Q8IVE3 1493 aa12.2□□□□□ -0.46
NFIA-208ENST00000407417 MLH3Q9UHC1 1453 aa12.2□□□□□ -0.46
NFIA-208ENST00000407417 MLECQ14165 292 aa12.19□□□□□ -0.46
NFIA-208ENST00000407417 C9orf84Q5VXU9 1444 aa12.19□□□□□ -0.46
NFIA-208ENST00000407417 DIP2CQ9Y2E4 1556 aa12.19□□□□□ -0.46
NFIA-208ENST00000407417 ABCA6Q8N139 1617 aa12.18□□□□□ -0.46
NFIA-208ENST00000407417 CAMSAP2Q08AD1 1489 aa12.18□□□□□ -0.46
NFIA-208ENST00000407417 MBD5Q9P267 1494 aa12.18□□□□□ -0.46
NFIA-208ENST00000407417 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
NFIA-208ENST00000407417 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
NFIA-208ENST00000407417 ADAMTSL3P82987 1691 aa12.17□□□□□ -0.46
NFIA-208ENST00000407417 KIDINS220Q9ULH0 1771 aa12.17□□□□□ -0.46
NFIA-208ENST00000407417 MYOM3Q5VTT5 1437 aa12.16□□□□□ -0.46
NFIA-208ENST00000407417 MADDQ8WXG6 1647 aa12.15□□□□□ -0.46
NFIA-208ENST00000407417 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
NFIA-208ENST00000407417 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
NFIA-208ENST00000407417 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
NFIA-208ENST00000407417 PTPRMP28827 1452 aa12.13□□□□□ -0.47
NFIA-208ENST00000407417 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
NFIA-208ENST00000407417 PLPPR3Q6T4P5 718 aa12.12□□□□□ -0.47
NFIA-208ENST00000407417 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
NFIA-208ENST00000407417 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
NFIA-208ENST00000407417 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
NFIA-208ENST00000407417 ARHGEF5Q12774 1597 aa12.1□□□□□ -0.47
NFIA-208ENST00000407417 AGLP35573 1532 aa12.09□□□□□ -0.47
NFIA-208ENST00000407417 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
NFIA-208ENST00000407417 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
NFIA-208ENST00000407417 A2MP01023 1474 aa12.09□□□□□ -0.47
NFIA-208ENST00000407417 PTPN23Q9H3S7 1636 aa12.09□□□□□ -0.47
NFIA-208ENST00000407417 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
NFIA-208ENST00000407417 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
NFIA-208ENST00000407417 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
NFIA-208ENST00000407417 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
NFIA-208ENST00000407417 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
NFIA-208ENST00000407417 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
NFIA-208ENST00000407417 TCOF1Q13428 1488 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms