RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.24
ERBB2-202ENST00000406381 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
ERBB2-202ENST00000406381 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
ERBB2-202ENST00000406381 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
ERBB2-202ENST00000406381 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
ERBB2-202ENST00000406381 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-202ENST00000406381 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
ERBB2-202ENST00000406381 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
ERBB2-202ENST00000406381 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
ERBB2-202ENST00000406381 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-202ENST00000406381 PKD2Q13563 968 aa16.46■□□□□ 0.23
ERBB2-202ENST00000406381 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
ERBB2-202ENST00000406381 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
ERBB2-202ENST00000406381 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.22
ERBB2-202ENST00000406381 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
ERBB2-202ENST00000406381 PTMSP20962 102 aa16.45■□□□□ 0.22
ERBB2-202ENST00000406381 CENPQQ7L2Z9 268 aaPredicted RBP16.44■□□□□ 0.22
ERBB2-202ENST00000406381 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
ERBB2-202ENST00000406381 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
ERBB2-202ENST00000406381 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
ERBB2-202ENST00000406381 MSH5O43196 834 aa16.42■□□□□ 0.22
ERBB2-202ENST00000406381 RWDD1Q9H446 243 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-202ENST00000406381 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
ERBB2-202ENST00000406381 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
ERBB2-202ENST00000406381 PLCB2Q00722 1185 aa16.4■□□□□ 0.22
ERBB2-202ENST00000406381 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
ERBB2-202ENST00000406381 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
ERBB2-202ENST00000406381 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
ERBB2-202ENST00000406381 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
ERBB2-202ENST00000406381 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
ERBB2-202ENST00000406381 PLIN1O60240 522 aa16.39■□□□□ 0.21
ERBB2-202ENST00000406381 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
ERBB2-202ENST00000406381 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERBB2-202ENST00000406381 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
ERBB2-202ENST00000406381 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
ERBB2-202ENST00000406381 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
ERBB2-202ENST00000406381 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
ERBB2-202ENST00000406381 TPRNQ4KMQ1 711 aa16.35■□□□□ 0.21
ERBB2-202ENST00000406381 MFAP1P55081 439 aaKnown RBP16.34■□□□□ 0.21
ERBB2-202ENST00000406381 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
ERBB2-202ENST00000406381 CFAP44Q96MT7 982 aa16.33■□□□□ 0.21
ERBB2-202ENST00000406381 CCDC7Q96M83 1385 aa16.33■□□□□ 0.2
ERBB2-202ENST00000406381 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
ERBB2-202ENST00000406381 KIF21BO75037 1637 aa16.32■□□□□ 0.2
ERBB2-202ENST00000406381 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
ERBB2-202ENST00000406381 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
ERBB2-202ENST00000406381 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
ERBB2-202ENST00000406381 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
ERBB2-202ENST00000406381 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
ERBB2-202ENST00000406381 FHOD3Q2V2M9 1422 aa16.3■□□□□ 0.2
ERBB2-202ENST00000406381 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
ERBB2-202ENST00000406381 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
ERBB2-202ENST00000406381 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
ERBB2-202ENST00000406381 NUP155O75694 1391 aa16.29■□□□□ 0.2
ERBB2-202ENST00000406381 ARID3AQ99856 593 aa16.29■□□□□ 0.2
ERBB2-202ENST00000406381 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
ERBB2-202ENST00000406381 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
ERBB2-202ENST00000406381 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
ERBB2-202ENST00000406381 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
ERBB2-202ENST00000406381 ZRSR1Q15695 479 aaKnown RBP16.26■□□□□ 0.19
ERBB2-202ENST00000406381 USP47Q96K76 1375 aa16.26■□□□□ 0.19
ERBB2-202ENST00000406381 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
ERBB2-202ENST00000406381 ESF1Q9H501 851 aaKnown RBP16.25■□□□□ 0.19
ERBB2-202ENST00000406381 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
ERBB2-202ENST00000406381 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
ERBB2-202ENST00000406381 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
ERBB2-202ENST00000406381 BACH2Q9BYV9 841 aa16.24■□□□□ 0.19
ERBB2-202ENST00000406381 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
ERBB2-202ENST00000406381 SKOR2Q2VWA4 1001 aaPredicted RBP16.23■□□□□ 0.19
ERBB2-202ENST00000406381 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
ERBB2-202ENST00000406381 MCCP23508 829 aa16.21■□□□□ 0.19
ERBB2-202ENST00000406381 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
ERBB2-202ENST00000406381 SYAP1Q96A49 352 aaPredicted RBP16.21■□□□□ 0.19
ERBB2-202ENST00000406381 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
ERBB2-202ENST00000406381 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.18
ERBB2-202ENST00000406381 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
ERBB2-202ENST00000406381 PANK3Q9H999 370 aa16.2■□□□□ 0.18
ERBB2-202ENST00000406381 ZBTB7CA1YPR0 619 aa16.2■□□□□ 0.18
ERBB2-202ENST00000406381 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
ERBB2-202ENST00000406381 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
ERBB2-202ENST00000406381 U2AF1L5P0DN76 240 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-202ENST00000406381 U2AF1Q01081 240 aaKnown RBP eCLIP16.19■□□□□ 0.18
ERBB2-202ENST00000406381 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
ERBB2-202ENST00000406381 NRDCO43847 1150 aa16.18■□□□□ 0.18
ERBB2-202ENST00000406381 DDX49Q9Y6V7 483 aaKnown RBP16.18■□□□□ 0.18
ERBB2-202ENST00000406381 GOLGA6L6A8MZA4 724 aa16.18■□□□□ 0.18
ERBB2-202ENST00000406381 E9PSI1 815 aa16.18■□□□□ 0.18
ERBB2-202ENST00000406381 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
ERBB2-202ENST00000406381 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
ERBB2-202ENST00000406381 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
ERBB2-202ENST00000406381 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-202ENST00000406381 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
ERBB2-202ENST00000406381 LRRC9Q6ZRR7 1453 aa16.15■□□□□ 0.18
ERBB2-202ENST00000406381 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
ERBB2-202ENST00000406381 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
ERBB2-202ENST00000406381 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
ERBB2-202ENST00000406381 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
ERBB2-202ENST00000406381 MRE11P49959 708 aa16.15■□□□□ 0.18
ERBB2-202ENST00000406381 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
ERBB2-202ENST00000406381 BRD4O60885 1362 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms