RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
SYNGR1-205ENST00000406293 SAMD9Q5K651 1589 aa25.9■■□□□ 1.74
SYNGR1-205ENST00000406293 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
SYNGR1-205ENST00000406293 HECW1Q76N89 1606 aa25.89■■□□□ 1.74
SYNGR1-205ENST00000406293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.88■■□□□ 1.73
SYNGR1-205ENST00000406293 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
SYNGR1-205ENST00000406293 SCAPERQ9BY12 1400 aa25.86■■□□□ 1.73
SYNGR1-205ENST00000406293 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
SYNGR1-205ENST00000406293 STRCQ7RTU9 1775 aa25.83■■□□□ 1.73
SYNGR1-205ENST00000406293 ATP10AO60312 1499 aa25.83■■□□□ 1.73
SYNGR1-205ENST00000406293 MYT1LQ9UL68 1186 aa25.82■■□□□ 1.72
SYNGR1-205ENST00000406293 C9orf84Q5VXU9 1444 aa25.81■■□□□ 1.72
SYNGR1-205ENST00000406293 PTPRTO14522 1441 aa25.75■■□□□ 1.71
SYNGR1-205ENST00000406293 CSRNP3Q8WYN3 585 aa25.75■■□□□ 1.71
SYNGR1-205ENST00000406293 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
SYNGR1-205ENST00000406293 PLCH2O75038 1416 aa25.72■■□□□ 1.71
SYNGR1-205ENST00000406293 EFCAB2Q5VUJ9 269 aa25.72■■□□□ 1.71
SYNGR1-205ENST00000406293 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.7
SYNGR1-205ENST00000406293 SETD1BQ9UPS6 1966 aaKnown RBP25.69■■□□□ 1.7
SYNGR1-205ENST00000406293 CDK13Q14004 1512 aaKnown RBP25.67■■□□□ 1.7
SYNGR1-205ENST00000406293 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
SYNGR1-205ENST00000406293 AFAP1Q8N556 730 aa25.65■■□□□ 1.7
SYNGR1-205ENST00000406293 UBAP1LF5GYI3 381 aa25.64■■□□□ 1.7
SYNGR1-205ENST00000406293 IQSEC2Q5JU85 1478 aa25.62■■□□□ 1.69
SYNGR1-205ENST00000406293 ZNF518AQ6AHZ1 1483 aa25.6■■□□□ 1.69
SYNGR1-205ENST00000406293 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.69
SYNGR1-205ENST00000406293 C3P01024 1663 aa25.58■■□□□ 1.68
SYNGR1-205ENST00000406293 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
SYNGR1-205ENST00000406293 NCOA1Q15788 1441 aa25.56■■□□□ 1.68
SYNGR1-205ENST00000406293 CDK11AQ9UQ88 783 aaPredicted RBP25.54■■□□□ 1.68
SYNGR1-205ENST00000406293 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
SYNGR1-205ENST00000406293 ZNF335Q9H4Z2 1342 aaPredicted RBP25.52■■□□□ 1.68
SYNGR1-205ENST00000406293 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
SYNGR1-205ENST00000406293 NCKAP5LQ9HCH0 1330 aa25.51■■□□□ 1.67
SYNGR1-205ENST00000406293 SCAF1Q9H7N4 1312 aaKnown RBP25.5■■□□□ 1.67
SYNGR1-205ENST00000406293 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
SYNGR1-205ENST00000406293 KDM5CP41229 1560 aa25.48■■□□□ 1.67
SYNGR1-205ENST00000406293 KIF14Q15058 1648 aa25.45■■□□□ 1.66
SYNGR1-205ENST00000406293 ABCA6Q8N139 1617 aa25.45■■□□□ 1.66
SYNGR1-205ENST00000406293 REREQ9P2R6 1566 aa25.44■■□□□ 1.66
SYNGR1-205ENST00000406293 CNTLNQ9NXG0 1405 aa25.44■■□□□ 1.66
SYNGR1-205ENST00000406293 MLH3Q9UHC1 1453 aa25.41■■□□□ 1.66
SYNGR1-205ENST00000406293 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
SYNGR1-205ENST00000406293 AGLP35573 1532 aa25.41■■□□□ 1.66
SYNGR1-205ENST00000406293 CLIP1P30622 1438 aa25.4■■□□□ 1.66
SYNGR1-205ENST00000406293 PIP4K2BP78356 416 aa25.4■■□□□ 1.66
SYNGR1-205ENST00000406293 TROQ12816 1431 aaPredicted RBP25.38■■□□□ 1.65
SYNGR1-205ENST00000406293 HSPA1LP34931 641 aa25.38■■□□□ 1.65
SYNGR1-205ENST00000406293 EEA1Q15075 1411 aa25.37■■□□□ 1.65
SYNGR1-205ENST00000406293 PKD2Q13563 968 aa25.37■■□□□ 1.65
SYNGR1-205ENST00000406293 FMN1Q68DA7 1419 aa25.36■■□□□ 1.65
SYNGR1-205ENST00000406293 ZMYM3Q14202 1370 aa25.35■■□□□ 1.65
SYNGR1-205ENST00000406293 PHF23Q9BUL5 403 aaPredicted RBP25.35■■□□□ 1.65
SYNGR1-205ENST00000406293 NPATQ14207 1427 aa25.35■■□□□ 1.65
SYNGR1-205ENST00000406293 MED1Q15648 1581 aaPredicted RBP25.33■■□□□ 1.65
SYNGR1-205ENST00000406293 PPP6R1Q9UPN7 881 aa25.33■■□□□ 1.65
SYNGR1-205ENST00000406293 UBTFP17480 764 aaKnown RBP25.31■■□□□ 1.64
SYNGR1-205ENST00000406293 TOM1O60784 492 aa25.29■■□□□ 1.64
SYNGR1-205ENST00000406293 CDC42BPBQ9Y5S2 1711 aa25.28■■□□□ 1.64
SYNGR1-205ENST00000406293 ABCC1P33527 1531 aa25.27■■□□□ 1.64
SYNGR1-205ENST00000406293 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
SYNGR1-205ENST00000406293 KIDINS220Q9ULH0 1771 aa25.26■■□□□ 1.63
SYNGR1-205ENST00000406293 PLA2R1Q13018 1463 aa25.25■■□□□ 1.63
SYNGR1-205ENST00000406293 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
SYNGR1-205ENST00000406293 ITSN2Q9NZM3 1697 aa25.25■■□□□ 1.63
SYNGR1-205ENST00000406293 SUPT6HQ7KZ85 1726 aaKnown RBP25.25■■□□□ 1.63
SYNGR1-205ENST00000406293 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
SYNGR1-205ENST00000406293 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
SYNGR1-205ENST00000406293 SPAG9O60271 1321 aaKnown RBP25.21■■□□□ 1.63
SYNGR1-205ENST00000406293 GGT6Q6P531 493 aa25.21■■□□□ 1.63
SYNGR1-205ENST00000406293 PREX2Q70Z35 1606 aa25.21■■□□□ 1.63
SYNGR1-205ENST00000406293 CEP170BQ9Y4F5 1589 aaPredicted RBP25.21■■□□□ 1.63
SYNGR1-205ENST00000406293 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
SYNGR1-205ENST00000406293 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
SYNGR1-205ENST00000406293 CLTCQ00610 1675 aaKnown RBP25.2■■□□□ 1.62
SYNGR1-205ENST00000406293 ZNF142P52746 1687 aaPredicted RBP25.17■■□□□ 1.62
SYNGR1-205ENST00000406293 PTPRKQ15262 1439 aa25.17■■□□□ 1.62
SYNGR1-205ENST00000406293 SAMD9LQ8IVG5 1584 aa25.15■■□□□ 1.62
SYNGR1-205ENST00000406293 HNRNPMP52272 730 aaKnown RBP eCLIP25.15■■□□□ 1.62
SYNGR1-205ENST00000406293 LRRIQ1Q96JM4 1722 aa25.12■■□□□ 1.61
SYNGR1-205ENST00000406293 CPS1P31327 1500 aa25.11■■□□□ 1.61
SYNGR1-205ENST00000406293 A2MP01023 1474 aa25.09■■□□□ 1.61
SYNGR1-205ENST00000406293 SHANK2Q9UPX8 1470 aa25.09■■□□□ 1.61
SYNGR1-205ENST00000406293 SYCP2Q9BX26 1530 aa25.08■■□□□ 1.61
SYNGR1-205ENST00000406293 A2ML1A8K2U0 1454 aa25.08■■□□□ 1.6
SYNGR1-205ENST00000406293 CDC42BPAQ5VT25 1732 aa25.06■■□□□ 1.6
SYNGR1-205ENST00000406293 ATP7AQ04656 1500 aa25.05■■□□□ 1.6
SYNGR1-205ENST00000406293 DNMT1P26358 1616 aaKnown RBP25.04■■□□□ 1.6
SYNGR1-205ENST00000406293 CCDC18Q5T9S5 1454 aa25.03■■□□□ 1.6
SYNGR1-205ENST00000406293 ANKLE2Q86XL3 938 aa25.02■■□□□ 1.6
SYNGR1-205ENST00000406293 PLXNC1O60486 1568 aa24.99■■□□□ 1.59
SYNGR1-205ENST00000406293 CFDP1Q9UEE9 299 aaPredicted RBP24.99■■□□□ 1.59
SYNGR1-205ENST00000406293 POLR1AO95602 1720 aaPredicted RBP24.98■■□□□ 1.59
SYNGR1-205ENST00000406293 TNRQ92752 1358 aa24.98■■□□□ 1.59
SYNGR1-205ENST00000406293 FBXO31Q5XUX0 539 aaPredicted RBP24.98■■□□□ 1.59
SYNGR1-205ENST00000406293 CASKIN1Q8WXD9 1431 aa24.97■■□□□ 1.59
SYNGR1-205ENST00000406293 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
SYNGR1-205ENST00000406293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.96■■□□□ 1.59
SYNGR1-205ENST00000406293 GPATCH8Q9UKJ3 1502 aaKnown RBP24.96■■□□□ 1.59
SYNGR1-205ENST00000406293 INO80Q9ULG1 1556 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms