RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
SYNGR1-205ENST00000406293 ABCC9O60706 1549 aa36.21■■■■□ 3.39
SYNGR1-205ENST00000406293 CCDC180Q9P1Z9 1646 aa35.18■■■■□ 3.22
SYNGR1-205ENST00000406293 DNAJC5BQ9UF47 199 aa34.69■■■■□ 3.14
SYNGR1-205ENST00000406293 RB1CC1Q8TDY2 1594 aa33.99■■■■□ 3.03
SYNGR1-205ENST00000406293 PABPN1Q86U42 306 aaKnown RBP eCLIP33.66■■■□□ 2.98
SYNGR1-205ENST00000406293 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
SYNGR1-205ENST00000406293 NACADO15069 1562 aa33.51■■■□□ 2.96
SYNGR1-205ENST00000406293 UNC13AQ9UPW8 1703 aa33.13■■■□□ 2.89
SYNGR1-205ENST00000406293 BICRAQ9NZM4 1560 aa32.97■■■□□ 2.87
SYNGR1-205ENST00000406293 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
SYNGR1-205ENST00000406293 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
SYNGR1-205ENST00000406293 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
SYNGR1-205ENST00000406293 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
SYNGR1-205ENST00000406293 SHROOM4Q9ULL8 1493 aa32.38■■■□□ 2.77
SYNGR1-205ENST00000406293 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
SYNGR1-205ENST00000406293 SCRIBQ14160 1630 aa32.16■■■□□ 2.74
SYNGR1-205ENST00000406293 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
SYNGR1-205ENST00000406293 DCAF1Q9Y4B6 1507 aa31.97■■■□□ 2.71
SYNGR1-205ENST00000406293 CUX2O14529 1486 aa31.45■■■□□ 2.62
SYNGR1-205ENST00000406293 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
SYNGR1-205ENST00000406293 NCAPD3P42695 1498 aa30.95■■■□□ 2.55
SYNGR1-205ENST00000406293 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
SYNGR1-205ENST00000406293 NESP48681 1621 aa30.83■■■□□ 2.53
SYNGR1-205ENST00000406293 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
SYNGR1-205ENST00000406293 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
SYNGR1-205ENST00000406293 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
SYNGR1-205ENST00000406293 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
SYNGR1-205ENST00000406293 SMARCA4P51532 1647 aa30.51■■■□□ 2.48
SYNGR1-205ENST00000406293 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
SYNGR1-205ENST00000406293 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
SYNGR1-205ENST00000406293 PDS5BQ9NTI5 1447 aa30.34■■■□□ 2.45
SYNGR1-205ENST00000406293 KIF21AQ7Z4S6 1674 aa30.33■■■□□ 2.45
SYNGR1-205ENST00000406293 BAZ1AQ9NRL2 1556 aaPredicted RBP30.25■■■□□ 2.43
SYNGR1-205ENST00000406293 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
SYNGR1-205ENST00000406293 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
SYNGR1-205ENST00000406293 CADPSQ9ULU8 1353 aa30.04■■■□□ 2.4
SYNGR1-205ENST00000406293 OSCARQ8IYS5 282 aa30■■■□□ 2.39
SYNGR1-205ENST00000406293 MROH2BQ7Z745 1585 aa29.99■■■□□ 2.39
SYNGR1-205ENST00000406293 WDR62O43379 1518 aa29.98■■■□□ 2.39
SYNGR1-205ENST00000406293 CEP164Q9UPV0 1460 aa29.83■■■□□ 2.37
SYNGR1-205ENST00000406293 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
SYNGR1-205ENST00000406293 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
SYNGR1-205ENST00000406293 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
SYNGR1-205ENST00000406293 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
SYNGR1-205ENST00000406293 WIZO95785 1651 aa29.6■■■□□ 2.33
SYNGR1-205ENST00000406293 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
SYNGR1-205ENST00000406293 CFTRP13569 1480 aa29.47■■■□□ 2.31
SYNGR1-205ENST00000406293 TRHP20396 242 aaPredicted RBP29.45■■■□□ 2.31
SYNGR1-205ENST00000406293 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
SYNGR1-205ENST00000406293 CYB5RLQ6IPT4 315 aa29.42■■■□□ 2.3
SYNGR1-205ENST00000406293 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
SYNGR1-205ENST00000406293 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
SYNGR1-205ENST00000406293 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
SYNGR1-205ENST00000406293 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
SYNGR1-205ENST00000406293 FBLN2P98095 1184 aa29.11■■■□□ 2.25
SYNGR1-205ENST00000406293 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
SYNGR1-205ENST00000406293 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
SYNGR1-205ENST00000406293 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
SYNGR1-205ENST00000406293 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
SYNGR1-205ENST00000406293 PRDM2Q13029 1718 aa29.03■■■□□ 2.24
SYNGR1-205ENST00000406293 CHD1O14646 1710 aa28.99■■■□□ 2.23
SYNGR1-205ENST00000406293 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.231e-7■■■■■ 32.4
SYNGR1-205ENST00000406293 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
SYNGR1-205ENST00000406293 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
SYNGR1-205ENST00000406293 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
SYNGR1-205ENST00000406293 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
SYNGR1-205ENST00000406293 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
SYNGR1-205ENST00000406293 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
SYNGR1-205ENST00000406293 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
SYNGR1-205ENST00000406293 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
SYNGR1-205ENST00000406293 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
SYNGR1-205ENST00000406293 SOGA1O94964 1423 aa28.61■■■□□ 2.17
SYNGR1-205ENST00000406293 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
SYNGR1-205ENST00000406293 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
SYNGR1-205ENST00000406293 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
SYNGR1-205ENST00000406293 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
SYNGR1-205ENST00000406293 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
SYNGR1-205ENST00000406293 FGD5Q6ZNL6 1462 aa28.41■■■□□ 2.14
SYNGR1-205ENST00000406293 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
SYNGR1-205ENST00000406293 WDR97A6NE52 1622 aa28.38■■■□□ 2.13
SYNGR1-205ENST00000406293 CUX1P39880 1505 aa28.22■■■□□ 2.11
SYNGR1-205ENST00000406293 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
SYNGR1-205ENST00000406293 ERCC6L2Q5T890 1561 aa28.17■■■□□ 2.1
SYNGR1-205ENST00000406293 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
SYNGR1-205ENST00000406293 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
SYNGR1-205ENST00000406293 ABCA10Q8WWZ4 1543 aa27.99■■■□□ 2.07
SYNGR1-205ENST00000406293 ABCA5Q8WWZ7 1642 aa27.99■■■□□ 2.07
SYNGR1-205ENST00000406293 KIF13AQ9H1H9 1805 aa27.97■■■□□ 2.07
SYNGR1-205ENST00000406293 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
SYNGR1-205ENST00000406293 ILDR1Q86SU0 546 aaPredicted RBP27.94■■■□□ 2.06
SYNGR1-205ENST00000406293 NUP160Q12769 1436 aa27.92■■■□□ 2.06
SYNGR1-205ENST00000406293 NPM1P06748 294 aaKnown RBP eCLIP27.88■■■□□ 2.05
SYNGR1-205ENST00000406293 ADAMTS12P58397 1594 aa27.87■■■□□ 2.05
SYNGR1-205ENST00000406293 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
SYNGR1-205ENST00000406293 KDM4FA0A1W2PPD8 638 aa27.84■■■□□ 2.05
SYNGR1-205ENST00000406293 PRG4Q92954 1404 aaPredicted RBP27.83■■■□□ 2.05
SYNGR1-205ENST00000406293 FHAD1B1AJZ9 1412 aa27.81■■■□□ 2.04
SYNGR1-205ENST00000406293 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
SYNGR1-205ENST00000406293 WRNQ14191 1432 aaPredicted RBP eCLIP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms