RNA–Protein interactions for RNA: ENST00000405148.6

ALS2CR12-203, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ALS2CR12, Length 2,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-203ENST00000405148 FOXD4L4Q8WXT5 416 aaPredicted RBP9.8□□□□□ -0.84
ALS2CR12-203ENST00000405148 RIMBP3CA6NJZ7 1639 aa9.8□□□□□ -0.84
ALS2CR12-203ENST00000405148 RIMBP3BA6NNM3 1639 aa9.8□□□□□ -0.84
ALS2CR12-203ENST00000405148 RIMBP3Q9UFD9 1639 aa9.8□□□□□ -0.84
ALS2CR12-203ENST00000405148 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
ALS2CR12-203ENST00000405148 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
ALS2CR12-203ENST00000405148 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
ALS2CR12-203ENST00000405148 PRR29P0C7W0 189 aa9.77□□□□□ -0.85
ALS2CR12-203ENST00000405148 HSP90B1P14625 803 aaKnown RBP9.77□□□□□ -0.85
ALS2CR12-203ENST00000405148 TMCO4Q5TGY1 634 aa9.77□□□□□ -0.85
ALS2CR12-203ENST00000405148 FLIIQ13045 1269 aa9.75□□□□□ -0.85
ALS2CR12-203ENST00000405148 CLUAP1Q96AJ1 413 aa9.75□□□□□ -0.85
ALS2CR12-203ENST00000405148 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
ALS2CR12-203ENST00000405148 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
ALS2CR12-203ENST00000405148 TRAK2O60296 914 aa9.72□□□□□ -0.85
ALS2CR12-203ENST00000405148 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
ALS2CR12-203ENST00000405148 E2F4Q16254 413 aa9.72□□□□□ -0.85
ALS2CR12-203ENST00000405148 GZF1Q9H116 711 aaPredicted RBP9.72□□□□□ -0.85
ALS2CR12-203ENST00000405148 PDE4DQ08499 809 aa9.7□□□□□ -0.86
ALS2CR12-203ENST00000405148 FAM117AQ9C073 453 aa9.7□□□□□ -0.86
ALS2CR12-203ENST00000405148 SMYD5Q6GMV2 418 aa9.69□□□□□ -0.86
ALS2CR12-203ENST00000405148 TRIM66O15016 1216 aa9.67□□□□□ -0.86
ALS2CR12-203ENST00000405148 PUS7Q96PZ0 661 aaKnown RBP9.67□□□□□ -0.86
ALS2CR12-203ENST00000405148 A6NJR5 290 aa9.66□□□□□ -0.86
ALS2CR12-203ENST00000405148 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
ALS2CR12-203ENST00000405148 SOCS7O14512 581 aa9.66□□□□□ -0.86
ALS2CR12-203ENST00000405148 LMTK3Q96Q04 1460 aa9.66□□□□□ -0.86
ALS2CR12-203ENST00000405148 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.87
ALS2CR12-203ENST00000405148 CHMP4AQ9BY43 222 aa9.64□□□□□ -0.87
ALS2CR12-203ENST00000405148 ARHGEF11O15085 1522 aa9.64□□□□□ -0.87
ALS2CR12-203ENST00000405148 CACNB1Q02641 598 aaPredicted RBP9.63□□□□□ -0.87
ALS2CR12-203ENST00000405148 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
ALS2CR12-203ENST00000405148 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
ALS2CR12-203ENST00000405148 E9PSI1 815 aa9.63□□□□□ -0.87
ALS2CR12-203ENST00000405148 RETREG2Q8NC44 543 aa9.62□□□□□ -0.87
ALS2CR12-203ENST00000405148 TSPYL2Q9H2G4 693 aaPredicted RBP9.62□□□□□ -0.87
ALS2CR12-203ENST00000405148 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
ALS2CR12-203ENST00000405148 RBM26Q5T8P6 1007 aaKnown RBP9.61□□□□□ -0.87
ALS2CR12-203ENST00000405148 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
ALS2CR12-203ENST00000405148 PCDHB13Q9Y5F0 798 aa9.61□□□□□ -0.87
ALS2CR12-203ENST00000405148 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
ALS2CR12-203ENST00000405148 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
ALS2CR12-203ENST00000405148 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
ALS2CR12-203ENST00000405148 ZNF467Q7Z7K2 595 aaPredicted RBP9.6□□□□□ -0.87
ALS2CR12-203ENST00000405148 USP35Q9P2H5 1018 aa9.59□□□□□ -0.87
ALS2CR12-203ENST00000405148 PDAP1Q13442 181 aaKnown RBP9.58□□□□□ -0.88
ALS2CR12-203ENST00000405148 IRF5Q13568 498 aa9.58□□□□□ -0.88
ALS2CR12-203ENST00000405148 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
ALS2CR12-203ENST00000405148 CCDC97Q96F63 343 aaPredicted RBP9.58□□□□□ -0.88
ALS2CR12-203ENST00000405148 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
ALS2CR12-203ENST00000405148 PPP1R37O75864 691 aa9.56□□□□□ -0.88
ALS2CR12-203ENST00000405148 SERPINA10Q9UK55 444 aa9.56□□□□□ -0.88
ALS2CR12-203ENST00000405148 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
ALS2CR12-203ENST00000405148 DDRGK1Q96HY6 314 aa9.55□□□□□ -0.88
ALS2CR12-203ENST00000405148 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
ALS2CR12-203ENST00000405148 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
ALS2CR12-203ENST00000405148 PSEN1P49768 467 aa9.53□□□□□ -0.88
ALS2CR12-203ENST00000405148 PROSER2Q86WR7 435 aaPredicted RBP9.52□□□□□ -0.89
ALS2CR12-203ENST00000405148 SMARCA2P51531 1590 aa9.51□□□□□ -0.89
ALS2CR12-203ENST00000405148 NESP48681 1621 aa9.5□□□□□ -0.89
ALS2CR12-203ENST00000405148 MCM6Q14566 821 aa9.49□□□□□ -0.89
ALS2CR12-203ENST00000405148 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
ALS2CR12-203ENST00000405148 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
ALS2CR12-203ENST00000405148 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
ALS2CR12-203ENST00000405148 CYB5RLQ6IPT4 315 aa9.47□□□□□ -0.89
ALS2CR12-203ENST00000405148 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
ALS2CR12-203ENST00000405148 LAMC3Q9Y6N6 1575 aa9.47□□□□□ -0.89
ALS2CR12-203ENST00000405148 POM121Q96HA1 1249 aa9.46□□□□□ -0.89
ALS2CR12-203ENST00000405148 FNBP4Q8N3X1 1017 aaPredicted RBP9.46□□□□□ -0.9
ALS2CR12-203ENST00000405148 FBXO22Q8NEZ5 403 aa9.46□□□□□ -0.9
ALS2CR12-203ENST00000405148 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
ALS2CR12-203ENST00000405148 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
ALS2CR12-203ENST00000405148 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
ALS2CR12-203ENST00000405148 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
ALS2CR12-203ENST00000405148 CCDC61Q9Y6R9 512 aa9.44□□□□□ -0.9
ALS2CR12-203ENST00000405148 ARAP1Q96P48 1450 aa9.44□□□□□ -0.9
ALS2CR12-203ENST00000405148 NCKAP5LQ9HCH0 1330 aa9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 WDR62O43379 1518 aa9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 NLRP6P59044 892 aa9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
ALS2CR12-203ENST00000405148 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
ALS2CR12-203ENST00000405148 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
ALS2CR12-203ENST00000405148 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
ALS2CR12-203ENST00000405148 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
ALS2CR12-203ENST00000405148 PDS5BQ9NTI5 1447 aa9.4□□□□□ -0.91
ALS2CR12-203ENST00000405148 PCMTD1Q96MG8 357 aaPredicted RBP9.39□□□□□ -0.91
ALS2CR12-203ENST00000405148 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
ALS2CR12-203ENST00000405148 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
ALS2CR12-203ENST00000405148 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
ALS2CR12-203ENST00000405148 SOX12O15370 315 aa9.37□□□□□ -0.91
ALS2CR12-203ENST00000405148 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
ALS2CR12-203ENST00000405148 AMOTL2Q9Y2J4 779 aa9.36□□□□□ -0.91
ALS2CR12-203ENST00000405148 MAP3K13O43283 966 aa9.36□□□□□ -0.91
ALS2CR12-203ENST00000405148 ILDR2Q71H61 639 aa9.36□□□□□ -0.91
ALS2CR12-203ENST00000405148 POLR3GLQ9BT43 218 aa9.35□□□□□ -0.91
ALS2CR12-203ENST00000405148 AMHR2Q16671 573 aa9.34□□□□□ -0.91
ALS2CR12-203ENST00000405148 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms