RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 KIAA2012Q0VF49 1180 aa23.09■■□□□ 1.29
LTBP1-203ENST00000404816 CCER2I3L3R5 266 aa23.08■■□□□ 1.29
LTBP1-203ENST00000404816 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
LTBP1-203ENST00000404816 MFAP1P55081 439 aaKnown RBP23.07■■□□□ 1.28
LTBP1-203ENST00000404816 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
LTBP1-203ENST00000404816 HSPA5P11021 654 aaKnown RBP23.05■■□□□ 1.28
LTBP1-203ENST00000404816 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
LTBP1-203ENST00000404816 RCAN3Q9UKA8 241 aa23.04■■□□□ 1.28
LTBP1-203ENST00000404816 TCERG1O14776 1098 aaKnown RBP23.02■■□□□ 1.28
LTBP1-203ENST00000404816 SOX12O15370 315 aa23.01■■□□□ 1.27
LTBP1-203ENST00000404816 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
LTBP1-203ENST00000404816 PLEKHD1A6NEE1 506 aa23.01■■□□□ 1.27
LTBP1-203ENST00000404816 SOGA1O94964 1423 aa23■■□□□ 1.27
LTBP1-203ENST00000404816 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
LTBP1-203ENST00000404816 FOXD4L5Q5VV16 416 aaPredicted RBP23■■□□□ 1.27
LTBP1-203ENST00000404816 FOXD4L4Q8WXT5 416 aaPredicted RBP23■■□□□ 1.27
LTBP1-203ENST00000404816 RSPH6AQ9H0K4 717 aa22.99■■□□□ 1.27
LTBP1-203ENST00000404816 CDCA8Q53HL2 280 aa22.98■■□□□ 1.27
LTBP1-203ENST00000404816 NOL8Q76FK4 1167 aaKnown RBP22.98■■□□□ 1.27
LTBP1-203ENST00000404816 NUDCQ9Y266 331 aa22.98■■□□□ 1.27
LTBP1-203ENST00000404816 POGKQ9P215 609 aa22.97■■□□□ 1.27
LTBP1-203ENST00000404816 MCCP23508 829 aa22.97■■□□□ 1.27
LTBP1-203ENST00000404816 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
LTBP1-203ENST00000404816 PDE4CQ08493 712 aa22.95■■□□□ 1.26
LTBP1-203ENST00000404816 MS4A1P11836 297 aa22.93■■□□□ 1.26
LTBP1-203ENST00000404816 FOXD1Q16676 465 aa22.93■■□□□ 1.26
LTBP1-203ENST00000404816 DCAF11Q8TEB1 546 aa22.92■■□□□ 1.26
LTBP1-203ENST00000404816 ITPRIPQ8IWB1 547 aa22.92■■□□□ 1.26
LTBP1-203ENST00000404816 GSE1Q14687 1217 aa22.92■■□□□ 1.26
LTBP1-203ENST00000404816 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.26
LTBP1-203ENST00000404816 NOC3LQ8WTT2 800 aaKnown RBP22.89■■□□□ 1.25
LTBP1-203ENST00000404816 CHMP4BQ9H444 224 aaKnown RBP22.87■■□□□ 1.25
LTBP1-203ENST00000404816 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
LTBP1-203ENST00000404816 CALD1Q05682 793 aaKnown RBP22.85■■□□□ 1.25
LTBP1-203ENST00000404816 PTMSP20962 102 aa22.85■■□□□ 1.25
LTBP1-203ENST00000404816 GNL2Q13823 731 aaKnown RBP22.85■■□□□ 1.25
LTBP1-203ENST00000404816 ANO8Q9HCE9 1232 aaPredicted RBP22.84■■□□□ 1.25
LTBP1-203ENST00000404816 TMF1P82094 1093 aa22.84■■□□□ 1.25
LTBP1-203ENST00000404816 SAFB2Q14151 953 aaKnown RBP eCLIP22.83■■□□□ 1.25
LTBP1-203ENST00000404816 FOXD4L6Q3SYB3 417 aaPredicted RBP22.82■■□□□ 1.24
LTBP1-203ENST00000404816 FOXD4L3Q6VB84 417 aaPredicted RBP22.82■■□□□ 1.24
LTBP1-203ENST00000404816 CLUAP1Q96AJ1 413 aa22.82■■□□□ 1.24
LTBP1-203ENST00000404816 HSP90B1P14625 803 aaKnown RBP22.81■■□□□ 1.24
LTBP1-203ENST00000404816 RWDD1Q9H446 243 aaPredicted RBP22.8■■□□□ 1.24
LTBP1-203ENST00000404816 A0A0U1RQG5 324 aaPredicted RBP22.8■■□□□ 1.24
LTBP1-203ENST00000404816 CCDC146Q8IYE0 955 aa22.8■■□□□ 1.24
LTBP1-203ENST00000404816 MORC1Q86VD1 984 aa22.8■■□□□ 1.24
LTBP1-203ENST00000404816 SYAP1Q96A49 352 aaPredicted RBP22.8■■□□□ 1.24
LTBP1-203ENST00000404816 FAM13BQ9NYF5 915 aa22.79■■□□□ 1.24
LTBP1-203ENST00000404816 PLIN1O60240 522 aa22.79■■□□□ 1.24
LTBP1-203ENST00000404816 ZNF771Q7L3S4 317 aaPredicted RBP22.79■■□□□ 1.24
LTBP1-203ENST00000404816 PDE4AP27815 886 aa22.78■■□□□ 1.24
LTBP1-203ENST00000404816 KRI1Q8N9T8 703 aaKnown RBP22.78■■□□□ 1.24
LTBP1-203ENST00000404816 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
LTBP1-203ENST00000404816 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
LTBP1-203ENST00000404816 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
LTBP1-203ENST00000404816 KIAA1211Q6ZU35 1233 aa22.76■■□□□ 1.23
LTBP1-203ENST00000404816 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
LTBP1-203ENST00000404816 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
LTBP1-203ENST00000404816 CUX2O14529 1486 aa22.76■■□□□ 1.23
LTBP1-203ENST00000404816 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
LTBP1-203ENST00000404816 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
LTBP1-203ENST00000404816 FBXO3Q9UK99 471 aa22.75■■□□□ 1.23
LTBP1-203ENST00000404816 MLECQ14165 292 aa22.75■■□□□ 1.23
LTBP1-203ENST00000404816 CREBRFQ8IUR6 639 aa22.74■■□□□ 1.23
LTBP1-203ENST00000404816 GOLGA6L1Q8N7Z2 621 aa22.74■■□□□ 1.23
LTBP1-203ENST00000404816 KANK4Q5T7N3 995 aaPredicted RBP22.73■■□□□ 1.23
LTBP1-203ENST00000404816 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
LTBP1-203ENST00000404816 USP35Q9P2H5 1018 aa22.71■■□□□ 1.23
LTBP1-203ENST00000404816 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
LTBP1-203ENST00000404816 SRPK2P78362 688 aaKnown RBP22.7■■□□□ 1.23
LTBP1-203ENST00000404816 EXOC6Q8TAG9 804 aa22.7■■□□□ 1.23
LTBP1-203ENST00000404816 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.22
LTBP1-203ENST00000404816 PMFBP1Q8TBY8 1022 aa22.7■■□□□ 1.22
LTBP1-203ENST00000404816 ZNF330Q9Y3S2 320 aaPredicted RBP22.69■■□□□ 1.22
LTBP1-203ENST00000404816 ZNF592Q92610 1267 aa22.68■■□□□ 1.22
LTBP1-203ENST00000404816 DDX49Q9Y6V7 483 aaKnown RBP22.68■■□□□ 1.22
LTBP1-203ENST00000404816 DDX11L8A8MPP1 907 aa22.66■■□□□ 1.22
LTBP1-203ENST00000404816 CCAR2Q8N163 923 aaKnown RBP22.66■■□□□ 1.22
LTBP1-203ENST00000404816 SMC4Q9NTJ3 1288 aa22.65■■□□□ 1.22
LTBP1-203ENST00000404816 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
LTBP1-203ENST00000404816 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.22
LTBP1-203ENST00000404816 IL27Q8NEV9 243 aa22.65■■□□□ 1.22
LTBP1-203ENST00000404816 FANCIQ9NVI1 1328 aa22.65■■□□□ 1.22
LTBP1-203ENST00000404816 STK26Q9P289 416 aa22.65■■□□□ 1.22
LTBP1-203ENST00000404816 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.22
LTBP1-203ENST00000404816 PATL2C9JE40 543 aaKnown RBP22.64■■□□□ 1.21
LTBP1-203ENST00000404816 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
LTBP1-203ENST00000404816 TPM4P67936 248 aa22.63■■□□□ 1.21
LTBP1-203ENST00000404816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.63■■□□□ 1.21
LTBP1-203ENST00000404816 CRBNQ96SW2 442 aa22.61■■□□□ 1.21
LTBP1-203ENST00000404816 CFAP44Q96MT7 982 aa22.61■■□□□ 1.21
LTBP1-203ENST00000404816 FAM161AQ3B820 660 aa22.61■■□□□ 1.21
LTBP1-203ENST00000404816 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
LTBP1-203ENST00000404816 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
LTBP1-203ENST00000404816 PKNOX2Q96KN3 472 aa22.59■■□□□ 1.21
LTBP1-203ENST00000404816 BRPF3Q9ULD4 1205 aa22.59■■□□□ 1.21
LTBP1-203ENST00000404816 CCDC9Q9Y3X0 531 aaKnown RBP22.59■■□□□ 1.21
LTBP1-203ENST00000404816 WIZO95785 1651 aa22.59■■□□□ 1.21
LTBP1-203ENST00000404816 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms