RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 KIF14Q15058 1648 aa31.98■■■□□ 2.71
HDAC11-205ENST00000404548 EHMT2Q96KQ7 1210 aa31.97■■■□□ 2.71
HDAC11-205ENST00000404548 PCF11O94913 1555 aaKnown RBP31.97■■■□□ 2.71
HDAC11-205ENST00000404548 EFCAB2Q5VUJ9 269 aa31.96■■■□□ 2.71
HDAC11-205ENST00000404548 ATP1B4Q9UN42 357 aaPredicted RBP31.96■■■□□ 2.71
HDAC11-205ENST00000404548 CLIP1P30622 1438 aa31.94■■■□□ 2.7
HDAC11-205ENST00000404548 RIMS1Q86UR5 1692 aaKnown RBP31.94■■■□□ 2.7
HDAC11-205ENST00000404548 LMTK3Q96Q04 1460 aa31.92■■■□□ 2.7
HDAC11-205ENST00000404548 SIGLEC1Q9BZZ2 1709 aa31.92■■■□□ 2.7
HDAC11-205ENST00000404548 ZNF518AQ6AHZ1 1483 aa31.88■■■□□ 2.69
HDAC11-205ENST00000404548 ATP10AO60312 1499 aa31.87■■■□□ 2.69
HDAC11-205ENST00000404548 LRRIQ1Q96JM4 1722 aa31.86■■■□□ 2.69
HDAC11-205ENST00000404548 CCDC18Q5T9S5 1454 aa31.86■■■□□ 2.69
HDAC11-205ENST00000404548 CASKIN1Q8WXD9 1431 aa31.86■■■□□ 2.69
HDAC11-205ENST00000404548 C9orf84Q5VXU9 1444 aa31.85■■■□□ 2.69
HDAC11-205ENST00000404548 ARHGAP5Q13017 1502 aa31.85■■■□□ 2.69
HDAC11-205ENST00000404548 KDM5CP41229 1560 aa31.84■■■□□ 2.69
HDAC11-205ENST00000404548 ARHGEF12Q9NZN5 1544 aa31.8■■■□□ 2.68
HDAC11-205ENST00000404548 FER1L4A9Z1Z3 1794 aa31.79■■■□□ 2.68
HDAC11-205ENST00000404548 PREX2Q70Z35 1606 aa31.75■■■□□ 2.67
HDAC11-205ENST00000404548 FYCO1Q9BQS8 1478 aa31.74■■■□□ 2.67
HDAC11-205ENST00000404548 CDC42BPBQ9Y5S2 1711 aa31.74■■■□□ 2.67
HDAC11-205ENST00000404548 REREQ9P2R6 1566 aa31.73■■■□□ 2.67
HDAC11-205ENST00000404548 MLH3Q9UHC1 1453 aa31.72■■■□□ 2.67
HDAC11-205ENST00000404548 MLECQ14165 292 aa31.71■■■□□ 2.67
HDAC11-205ENST00000404548 AFAP1Q8N556 730 aa31.7■■■□□ 2.67
HDAC11-205ENST00000404548 FBXO41Q8TF61 875 aa31.7■■■□□ 2.67
HDAC11-205ENST00000404548 ABCC1P33527 1531 aa31.7■■■□□ 2.66
HDAC11-205ENST00000404548 DIP2CQ9Y2E4 1556 aa31.68■■■□□ 2.66
HDAC11-205ENST00000404548 ITSN2Q9NZM3 1697 aa31.61■■■□□ 2.65
HDAC11-205ENST00000404548 ABCA6Q8N139 1617 aa31.61■■■□□ 2.65
HDAC11-205ENST00000404548 HSPA2P54652 639 aa31.61■■■□□ 2.65
HDAC11-205ENST00000404548 AGLP35573 1532 aa31.6■■■□□ 2.65
HDAC11-205ENST00000404548 TRAPPC8Q9Y2L5 1435 aa31.6■■■□□ 2.65
HDAC11-205ENST00000404548 CDC42BPAQ5VT25 1732 aa31.59■■■□□ 2.65
HDAC11-205ENST00000404548 PLPPR3Q6T4P5 718 aa31.58■■■□□ 2.65
HDAC11-205ENST00000404548 PREX1Q8TCU6 1659 aa31.57■■■□□ 2.65
HDAC11-205ENST00000404548 MYT1LQ9UL68 1186 aa31.54■■■□□ 2.64
HDAC11-205ENST00000404548 GPATCH8Q9UKJ3 1502 aaKnown RBP31.51■■■□□ 2.63
HDAC11-205ENST00000404548 KIDINS220Q9ULH0 1771 aa31.51■■■□□ 2.63
HDAC11-205ENST00000404548 SAMD9LQ8IVG5 1584 aa31.48■■■□□ 2.63
HDAC11-205ENST00000404548 CEBPAP49715 358 aaPredicted RBP31.47■■■□□ 2.63
HDAC11-205ENST00000404548 UHRF1BP1Q6BDS2 1440 aa31.46■■■□□ 2.63
HDAC11-205ENST00000404548 SETD1BQ9UPS6 1966 aaKnown RBP31.45■■■□□ 2.63
HDAC11-205ENST00000404548 KIAA1107Q9UPP5 1409 aa31.45■■■□□ 2.63
HDAC11-205ENST00000404548 PLEKHH2Q8IVE3 1493 aa31.44■■■□□ 2.62
HDAC11-205ENST00000404548 SYCP2Q9BX26 1530 aa31.44■■■□□ 2.62
HDAC11-205ENST00000404548 CNTLNQ9NXG0 1405 aa31.43■■■□□ 2.62
HDAC11-205ENST00000404548 C3P01024 1663 aa31.41■■■□□ 2.62
HDAC11-205ENST00000404548 ESF1Q9H501 851 aaKnown RBP31.38■■■□□ 2.61
HDAC11-205ENST00000404548 ZNF777Q9ULD5 760 aaPredicted RBP31.37■■■□□ 2.61
HDAC11-205ENST00000404548 MTUS2Q5JR59 1369 aa31.37■■■□□ 2.61
HDAC11-205ENST00000404548 CCNB3Q8WWL7 1395 aa31.37■■■□□ 2.61
HDAC11-205ENST00000404548 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
HDAC11-205ENST00000404548 CFDP1Q9UEE9 299 aaPredicted RBP31.36■■■□□ 2.61
HDAC11-205ENST00000404548 DMRT2Q9Y5R5 561 aa31.35■■■□□ 2.61
HDAC11-205ENST00000404548 INO80Q9ULG1 1556 aaPredicted RBP31.34■■■□□ 2.61
HDAC11-205ENST00000404548 ATP7AQ04656 1500 aa31.34■■■□□ 2.61
HDAC11-205ENST00000404548 CERKQ8TCT0 537 aa31.33■■■□□ 2.61
HDAC11-205ENST00000404548 PLXNC1O60486 1568 aa31.32■■■□□ 2.6
HDAC11-205ENST00000404548 STRCQ7RTU9 1775 aa31.32■■■□□ 2.6
HDAC11-205ENST00000404548 MROH2AA6NES4 1674 aa31.32■■■□□ 2.6
HDAC11-205ENST00000404548 EHBP1L1Q8N3D4 1523 aa31.31■■■□□ 2.6
HDAC11-205ENST00000404548 HNRNPMP52272 730 aaKnown RBP eCLIP31.31■■■□□ 2.6
HDAC11-205ENST00000404548 NPATQ14207 1427 aa31.29■■■□□ 2.6
HDAC11-205ENST00000404548 TIAM1Q13009 1591 aa31.26■■■□□ 2.6
HDAC11-205ENST00000404548 CEP162Q5TB80 1403 aa31.26■■■□□ 2.6
HDAC11-205ENST00000404548 A2MP01023 1474 aa31.26■■■□□ 2.59
HDAC11-205ENST00000404548 PTPRTO14522 1441 aa31.24■■■□□ 2.59
HDAC11-205ENST00000404548 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
HDAC11-205ENST00000404548 MBD5Q9P267 1494 aa31.21■■■□□ 2.59
HDAC11-205ENST00000404548 ZMYM3Q14202 1370 aa31.2■■■□□ 2.59
HDAC11-205ENST00000404548 RTEL1-TNFRSF6BF6WH68 1400 aa31.17■■■□□ 2.58
HDAC11-205ENST00000404548 NCOA1Q15788 1441 aa31.17■■■□□ 2.58
HDAC11-205ENST00000404548 ADGBQ8N7X0 1667 aa31.17■■■□□ 2.58
HDAC11-205ENST00000404548 PPP6R1Q9UPN7 881 aa31.16■■■□□ 2.58
HDAC11-205ENST00000404548 ZNF644Q9H582 1327 aaPredicted RBP31.13■■■□□ 2.57
HDAC11-205ENST00000404548 CLTCQ00610 1675 aaKnown RBP31.11■■■□□ 2.57
HDAC11-205ENST00000404548 PTPRKQ15262 1439 aa31.08■■■□□ 2.57
HDAC11-205ENST00000404548 NCOA2Q15596 1464 aa31.08■■■□□ 2.57
HDAC11-205ENST00000404548 ZNF142P52746 1687 aaPredicted RBP31.07■■■□□ 2.56
HDAC11-205ENST00000404548 CAMSAP1Q5T5Y3 1602 aa31.06■■■□□ 2.56
HDAC11-205ENST00000404548 CCDC141Q6ZP82 1450 aa31.06■■■□□ 2.56
HDAC11-205ENST00000404548 DHX29Q7Z478 1369 aaKnown RBP31.05■■■□□ 2.56
HDAC11-205ENST00000404548 MYO3AQ8NEV4 1616 aa31.05■■■□□ 2.56
HDAC11-205ENST00000404548 RSPH4AQ5TD94 716 aa31.04■■■□□ 2.56
HDAC11-205ENST00000404548 GGT6Q6P531 493 aa31.04■■■□□ 2.56
HDAC11-205ENST00000404548 PLA2R1Q13018 1463 aa31.03■■■□□ 2.56
HDAC11-205ENST00000404548 FAM135AQ9P2D6 1515 aa31.03■■■□□ 2.56
HDAC11-205ENST00000404548 LTBP4Q8N2S1 1624 aa31.02■■■□□ 2.56
HDAC11-205ENST00000404548 CAMSAP2Q08AD1 1489 aa31.02■■■□□ 2.56
HDAC11-205ENST00000404548 IQSEC2Q5JU85 1478 aa31.02■■■□□ 2.56
HDAC11-205ENST00000404548 CEP170BQ9Y4F5 1589 aaPredicted RBP31■■■□□ 2.55
HDAC11-205ENST00000404548 VPS8Q8N3P4 1428 aa30.97■■■□□ 2.55
HDAC11-205ENST00000404548 ARHGEF5Q12774 1597 aa30.96■■■□□ 2.55
HDAC11-205ENST00000404548 TCOF1Q13428 1488 aaKnown RBP30.95■■■□□ 2.55
HDAC11-205ENST00000404548 PKD2Q13563 968 aa30.94■■■□□ 2.54
HDAC11-205ENST00000404548 LRRC9Q6ZRR7 1453 aa30.92■■■□□ 2.54
HDAC11-205ENST00000404548 KDM5DQ9BY66 1539 aa30.92■■■□□ 2.54
HDAC11-205ENST00000404548 A2ML1A8K2U0 1454 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms