RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 RICTORQ6R327 1708 aa21.35■■□□□ 1.01
SDF4-203ENST00000403997 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
SDF4-203ENST00000403997 POGZQ7Z3K3 1410 aa21.3■■□□□ 1
SDF4-203ENST00000403997 MAGI2Q86UL8 1455 aa21.28■■□□□ 1
SDF4-203ENST00000403997 AFAP1Q8N556 730 aa21.28■■□□□ 1
SDF4-203ENST00000403997 ZMYM4Q5VZL5 1548 aa21.28■■□□□ 1
SDF4-203ENST00000403997 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
SDF4-203ENST00000403997 YEATS2Q9ULM3 1422 aa21.28■■□□□ 1
SDF4-203ENST00000403997 MYT1LQ9UL68 1186 aa21.27■■□□□ 1
SDF4-203ENST00000403997 ZFYVE16Q7Z3T8 1539 aa21.27■■□□□ 1
SDF4-203ENST00000403997 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
SDF4-203ENST00000403997 ZNF777Q9ULD5 760 aaPredicted RBP21.24■□□□□ 0.99
SDF4-203ENST00000403997 CDC42BPBQ9Y5S2 1711 aa21.24■□□□□ 0.99
SDF4-203ENST00000403997 FBXO41Q8TF61 875 aa21.23■□□□□ 0.99
SDF4-203ENST00000403997 ZNF518AQ6AHZ1 1483 aa21.22■□□□□ 0.99
SDF4-203ENST00000403997 ADAMTSL3P82987 1691 aa21.21■□□□□ 0.99
SDF4-203ENST00000403997 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
SDF4-203ENST00000403997 MLECQ14165 292 aa21.2■□□□□ 0.98
SDF4-203ENST00000403997 BCORL1Q5H9F3 1711 aa21.2■□□□□ 0.98
SDF4-203ENST00000403997 ATP10AO60312 1499 aa21.2■□□□□ 0.98
SDF4-203ENST00000403997 CCNB3Q8WWL7 1395 aa21.19■□□□□ 0.98
SDF4-203ENST00000403997 PTPRMP28827 1452 aa21.19■□□□□ 0.98
SDF4-203ENST00000403997 CFDP1Q9UEE9 299 aaPredicted RBP21.18■□□□□ 0.98
SDF4-203ENST00000403997 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
SDF4-203ENST00000403997 TRAPPC8Q9Y2L5 1435 aa21.17■□□□□ 0.98
SDF4-203ENST00000403997 CDC42BPAQ5VT25 1732 aa21.17■□□□□ 0.98
SDF4-203ENST00000403997 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
SDF4-203ENST00000403997 C9orf84Q5VXU9 1444 aa21.15■□□□□ 0.98
SDF4-203ENST00000403997 ABCC1P33527 1531 aa21.14■□□□□ 0.98
SDF4-203ENST00000403997 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.979e-7■■□□□ 13.3
SDF4-203ENST00000403997 MADDQ8WXG6 1647 aa21.14■□□□□ 0.97
SDF4-203ENST00000403997 KDM5CP41229 1560 aa21.14■□□□□ 0.97
SDF4-203ENST00000403997 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
SDF4-203ENST00000403997 HECW2Q9P2P5 1572 aa21.11■□□□□ 0.97
SDF4-203ENST00000403997 SIGLEC1Q9BZZ2 1709 aa21.11■□□□□ 0.97
SDF4-203ENST00000403997 MLH3Q9UHC1 1453 aa21.11■□□□□ 0.97
SDF4-203ENST00000403997 EHBP1L1Q8N3D4 1523 aa21.1■□□□□ 0.97
SDF4-203ENST00000403997 VPS8Q8N3P4 1428 aa21.1■□□□□ 0.97
SDF4-203ENST00000403997 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
SDF4-203ENST00000403997 SAMD9LQ8IVG5 1584 aa21.09■□□□□ 0.97
SDF4-203ENST00000403997 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
SDF4-203ENST00000403997 RIMS1Q86UR5 1692 aaKnown RBP21.07■□□□□ 0.96
SDF4-203ENST00000403997 PLEKHH2Q8IVE3 1493 aa21.07■□□□□ 0.96
SDF4-203ENST00000403997 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
SDF4-203ENST00000403997 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
SDF4-203ENST00000403997 SYCP2Q9BX26 1530 aa21.06■□□□□ 0.96
SDF4-203ENST00000403997 DIP2CQ9Y2E4 1556 aa21.05■□□□□ 0.96
SDF4-203ENST00000403997 TIAM1Q13009 1591 aa21.03■□□□□ 0.96
SDF4-203ENST00000403997 ABCA6Q8N139 1617 aa21.02■□□□□ 0.96
SDF4-203ENST00000403997 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
SDF4-203ENST00000403997 KIDINS220Q9ULH0 1771 aa21■□□□□ 0.95
SDF4-203ENST00000403997 REREQ9P2R6 1566 aa20.99■□□□□ 0.95
SDF4-203ENST00000403997 FER1L4A9Z1Z3 1794 aa20.99■□□□□ 0.95
SDF4-203ENST00000403997 LMTK3Q96Q04 1460 aa20.99■□□□□ 0.95
SDF4-203ENST00000403997 SUPT6HQ7KZ85 1726 aaKnown RBP20.98■□□□□ 0.95
SDF4-203ENST00000403997 CEBPAP49715 358 aaPredicted RBP20.98■□□□□ 0.95
SDF4-203ENST00000403997 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
SDF4-203ENST00000403997 ESF1Q9H501 851 aaKnown RBP20.98■□□□□ 0.95
SDF4-203ENST00000403997 LRRC9Q6ZRR7 1453 aa20.98■□□□□ 0.95
SDF4-203ENST00000403997 AGLP35573 1532 aa20.96■□□□□ 0.95
SDF4-203ENST00000403997 APLP2Q06481 763 aa20.96■□□□□ 0.95
SDF4-203ENST00000403997 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
SDF4-203ENST00000403997 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
SDF4-203ENST00000403997 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
SDF4-203ENST00000403997 RSPH4AQ5TD94 716 aa20.92■□□□□ 0.94
SDF4-203ENST00000403997 HSPA2P54652 639 aa20.91■□□□□ 0.94
SDF4-203ENST00000403997 A2MP01023 1474 aa20.9■□□□□ 0.94
SDF4-203ENST00000403997 CAMSAP2Q08AD1 1489 aa20.89■□□□□ 0.94
SDF4-203ENST00000403997 INO80Q9ULG1 1556 aaPredicted RBP20.89■□□□□ 0.93
SDF4-203ENST00000403997 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
SDF4-203ENST00000403997 SOCS7O14512 581 aa20.87■□□□□ 0.93
SDF4-203ENST00000403997 GGT6Q6P531 493 aa20.87■□□□□ 0.93
SDF4-203ENST00000403997 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
SDF4-203ENST00000403997 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
SDF4-203ENST00000403997 CCDC141Q6ZP82 1450 aa20.86■□□□□ 0.93
SDF4-203ENST00000403997 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
SDF4-203ENST00000403997 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
SDF4-203ENST00000403997 MYOM3Q5VTT5 1437 aa20.81■□□□□ 0.92
SDF4-203ENST00000403997 PLXNC1O60486 1568 aa20.8■□□□□ 0.92
SDF4-203ENST00000403997 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
SDF4-203ENST00000403997 ZMYM3Q14202 1370 aa20.8■□□□□ 0.92
SDF4-203ENST00000403997 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
SDF4-203ENST00000403997 MIA2Q96PC5 1412 aa20.79■□□□□ 0.92
SDF4-203ENST00000403997 KIF3BO15066 747 aa20.79■□□□□ 0.92
SDF4-203ENST00000403997 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
SDF4-203ENST00000403997 UHRF1BP1Q6BDS2 1440 aa20.78■□□□□ 0.92
SDF4-203ENST00000403997 C3P01024 1663 aa20.78■□□□□ 0.92
SDF4-203ENST00000403997 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
SDF4-203ENST00000403997 ILDR2Q71H61 639 aa20.76■□□□□ 0.91
SDF4-203ENST00000403997 PREX1Q8TCU6 1659 aa20.76■□□□□ 0.91
SDF4-203ENST00000403997 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
SDF4-203ENST00000403997 MROH2AA6NES4 1674 aa20.7■□□□□ 0.91
SDF4-203ENST00000403997 CLTCQ00610 1675 aaKnown RBP20.7■□□□□ 0.91
SDF4-203ENST00000403997 NPATQ14207 1427 aa20.7■□□□□ 0.9
SDF4-203ENST00000403997 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
SDF4-203ENST00000403997 DMRT2Q9Y5R5 561 aa20.67■□□□□ 0.9
SDF4-203ENST00000403997 FGD6Q6ZV73 1430 aa20.66■□□□□ 0.9
SDF4-203ENST00000403997 MAST1Q9Y2H9 1570 aa20.66■□□□□ 0.9
SDF4-203ENST00000403997 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
SDF4-203ENST00000403997 PTPRKQ15262 1439 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms