RNA–Protein interactions for RNA: ENST00000403506.1

CLHC1-202, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-202ENST00000403506 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
CLHC1-202ENST00000403506 ARHGAP5Q13017 1502 aa17.38■□□□□ 0.37
CLHC1-202ENST00000403506 ZMYM4Q5VZL5 1548 aa17.38■□□□□ 0.37
CLHC1-202ENST00000403506 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
CLHC1-202ENST00000403506 PREX2Q70Z35 1606 aa17.33■□□□□ 0.37
CLHC1-202ENST00000403506 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.37
CLHC1-202ENST00000403506 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
CLHC1-202ENST00000403506 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
CLHC1-202ENST00000403506 AFAP1Q8N556 730 aa17.32■□□□□ 0.36
CLHC1-202ENST00000403506 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
CLHC1-202ENST00000403506 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CLHC1-202ENST00000403506 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
CLHC1-202ENST00000403506 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
CLHC1-202ENST00000403506 ADAMTSL3P82987 1691 aa17.29■□□□□ 0.36
CLHC1-202ENST00000403506 ABCC1P33527 1531 aa17.29■□□□□ 0.36
CLHC1-202ENST00000403506 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
CLHC1-202ENST00000403506 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
CLHC1-202ENST00000403506 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
CLHC1-202ENST00000403506 KDM5CP41229 1560 aa17.28■□□□□ 0.36
CLHC1-202ENST00000403506 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
CLHC1-202ENST00000403506 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.35
CLHC1-202ENST00000403506 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
CLHC1-202ENST00000403506 ATP10AO60312 1499 aa17.24■□□□□ 0.35
CLHC1-202ENST00000403506 PTPRMP28827 1452 aa17.24■□□□□ 0.35
CLHC1-202ENST00000403506 SAMD9LQ8IVG5 1584 aa17.24■□□□□ 0.35
CLHC1-202ENST00000403506 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
CLHC1-202ENST00000403506 EHBP1L1Q8N3D4 1523 aa17.24■□□□□ 0.35
CLHC1-202ENST00000403506 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
CLHC1-202ENST00000403506 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
CLHC1-202ENST00000403506 C9orf84Q5VXU9 1444 aa17.22■□□□□ 0.35
CLHC1-202ENST00000403506 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
CLHC1-202ENST00000403506 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
CLHC1-202ENST00000403506 HECW2Q9P2P5 1572 aa17.21■□□□□ 0.35
CLHC1-202ENST00000403506 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
CLHC1-202ENST00000403506 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
CLHC1-202ENST00000403506 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.34
CLHC1-202ENST00000403506 DIP2CQ9Y2E4 1556 aa17.2■□□□□ 0.34
CLHC1-202ENST00000403506 MLECQ14165 292 aa17.2■□□□□ 0.34
CLHC1-202ENST00000403506 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
CLHC1-202ENST00000403506 HNRNPMP52272 730 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLHC1-202ENST00000403506 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
CLHC1-202ENST00000403506 KIAA1107Q9UPP5 1409 aa17.18■□□□□ 0.34
CLHC1-202ENST00000403506 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
CLHC1-202ENST00000403506 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
CLHC1-202ENST00000403506 MYT1LQ9UL68 1186 aa17.16■□□□□ 0.34
CLHC1-202ENST00000403506 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
CLHC1-202ENST00000403506 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
CLHC1-202ENST00000403506 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
CLHC1-202ENST00000403506 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
CLHC1-202ENST00000403506 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
CLHC1-202ENST00000403506 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
CLHC1-202ENST00000403506 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
CLHC1-202ENST00000403506 APLP2Q06481 763 aa17.13■□□□□ 0.33
CLHC1-202ENST00000403506 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
CLHC1-202ENST00000403506 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
CLHC1-202ENST00000403506 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
CLHC1-202ENST00000403506 AGLP35573 1532 aa17.1■□□□□ 0.33
CLHC1-202ENST00000403506 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
CLHC1-202ENST00000403506 INO80Q9ULG1 1556 aaPredicted RBP17.09■□□□□ 0.33
CLHC1-202ENST00000403506 CAMSAP2Q08AD1 1489 aa17.07■□□□□ 0.32
CLHC1-202ENST00000403506 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
CLHC1-202ENST00000403506 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
CLHC1-202ENST00000403506 CEBPAP49715 358 aaPredicted RBP17.06■□□□□ 0.32
CLHC1-202ENST00000403506 PLXNC1O60486 1568 aa17.03■□□□□ 0.32
CLHC1-202ENST00000403506 A2MP01023 1474 aa17.02■□□□□ 0.32
CLHC1-202ENST00000403506 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
CLHC1-202ENST00000403506 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
CLHC1-202ENST00000403506 HSPA2P54652 639 aa17■□□□□ 0.31
CLHC1-202ENST00000403506 MYOM3Q5VTT5 1437 aa17■□□□□ 0.31
CLHC1-202ENST00000403506 ARHGEF5Q12774 1597 aa16.98■□□□□ 0.31
CLHC1-202ENST00000403506 MIA2Q96PC5 1412 aa16.96■□□□□ 0.31
CLHC1-202ENST00000403506 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
CLHC1-202ENST00000403506 DHX29Q7Z478 1369 aaKnown RBP16.95■□□□□ 0.3
CLHC1-202ENST00000403506 CNTLNQ9NXG0 1405 aa16.94■□□□□ 0.3
CLHC1-202ENST00000403506 ADGBQ8N7X0 1667 aa16.94■□□□□ 0.3
CLHC1-202ENST00000403506 GGT6Q6P531 493 aa16.93■□□□□ 0.3
CLHC1-202ENST00000403506 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
CLHC1-202ENST00000403506 C3P01024 1663 aa16.93■□□□□ 0.3
CLHC1-202ENST00000403506 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
CLHC1-202ENST00000403506 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
CLHC1-202ENST00000403506 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
CLHC1-202ENST00000403506 FGD6Q6ZV73 1430 aa16.89■□□□□ 0.29
CLHC1-202ENST00000403506 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
CLHC1-202ENST00000403506 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
CLHC1-202ENST00000403506 KIF3BO15066 747 aa16.88■□□□□ 0.29
CLHC1-202ENST00000403506 ABCC5O15440 1437 aa16.87■□□□□ 0.29
CLHC1-202ENST00000403506 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
CLHC1-202ENST00000403506 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
CLHC1-202ENST00000403506 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
CLHC1-202ENST00000403506 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
CLHC1-202ENST00000403506 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
CLHC1-202ENST00000403506 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
CLHC1-202ENST00000403506 NPATQ14207 1427 aa16.85■□□□□ 0.29
CLHC1-202ENST00000403506 PTPRKQ15262 1439 aa16.85■□□□□ 0.29
CLHC1-202ENST00000403506 DAPK1P53355 1430 aa16.83■□□□□ 0.28
CLHC1-202ENST00000403506 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
CLHC1-202ENST00000403506 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
CLHC1-202ENST00000403506 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
CLHC1-202ENST00000403506 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
CLHC1-202ENST00000403506 CROCC2H7BZ55 1655 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms