RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 DNMT1P26358 1616 aaKnown RBP24.2■■□□□ 1.46
DNMT3A-205ENST00000402667 DDX10Q13206 875 aaKnown RBP24.17■■□□□ 1.46
DNMT3A-205ENST00000402667 MPHOSPH9Q99550 1183 aa24.16■■□□□ 1.46
DNMT3A-205ENST00000402667 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
DNMT3A-205ENST00000402667 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.45
DNMT3A-205ENST00000402667 KDM5BQ9UGL1 1544 aa24.14■■□□□ 1.45
DNMT3A-205ENST00000402667 GPATCH8Q9UKJ3 1502 aaKnown RBP24.13■■□□□ 1.45
DNMT3A-205ENST00000402667 ADCY10Q96PN6 1610 aa24.13■■□□□ 1.45
DNMT3A-205ENST00000402667 KIF14Q15058 1648 aa24.12■■□□□ 1.45
DNMT3A-205ENST00000402667 ABCA8O94911 1581 aa24.12■■□□□ 1.45
DNMT3A-205ENST00000402667 ITSN2Q9NZM3 1697 aa24.11■■□□□ 1.45
DNMT3A-205ENST00000402667 CAMSAP2Q08AD1 1489 aa24.1■■□□□ 1.45
DNMT3A-205ENST00000402667 PLEKHD1A6NEE1 506 aa24.07■■□□□ 1.44
DNMT3A-205ENST00000402667 ATP10BO94823 1461 aa24.07■■□□□ 1.44
DNMT3A-205ENST00000402667 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
DNMT3A-205ENST00000402667 FOXD1Q16676 465 aa24.04■■□□□ 1.44
DNMT3A-205ENST00000402667 ZNF777Q9ULD5 760 aaPredicted RBP24.04■■□□□ 1.44
DNMT3A-205ENST00000402667 KCNH8Q96L42 1107 aa24.02■■□□□ 1.44
DNMT3A-205ENST00000402667 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
DNMT3A-205ENST00000402667 ANKRD30BQ9BXX2 1392 aa24■■□□□ 1.43
DNMT3A-205ENST00000402667 PTPRGP23470 1445 aa23.99■■□□□ 1.43
DNMT3A-205ENST00000402667 ABCC10Q5T3U5 1492 aa23.99■■□□□ 1.43
DNMT3A-205ENST00000402667 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
DNMT3A-205ENST00000402667 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
DNMT3A-205ENST00000402667 ADGBQ8N7X0 1667 aa23.97■■□□□ 1.43
DNMT3A-205ENST00000402667 L3MBTL2Q969R5 705 aa23.96■■□□□ 1.43
DNMT3A-205ENST00000402667 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
DNMT3A-205ENST00000402667 CROCC2H7BZ55 1655 aa23.95■■□□□ 1.42
DNMT3A-205ENST00000402667 CHD1O14646 1710 aa23.95■■□□□ 1.42
DNMT3A-205ENST00000402667 RPRD2Q5VT52 1461 aaKnown RBP23.93■■□□□ 1.42
DNMT3A-205ENST00000402667 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
DNMT3A-205ENST00000402667 PZPP20742 1482 aa23.91■■□□□ 1.42
DNMT3A-205ENST00000402667 ANP32CO43423 234 aa23.9■■□□□ 1.42
DNMT3A-205ENST00000402667 HSPA5P11021 654 aaKnown RBP23.89■■□□□ 1.42
DNMT3A-205ENST00000402667 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
DNMT3A-205ENST00000402667 TEX14Q8IWB6 1497 aa23.86■■□□□ 1.41
DNMT3A-205ENST00000402667 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
DNMT3A-205ENST00000402667 SHROOM2Q13796 1616 aa23.85■■□□□ 1.41
DNMT3A-205ENST00000402667 SHANK2Q9UPX8 1470 aa23.85■■□□□ 1.41
DNMT3A-205ENST00000402667 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
DNMT3A-205ENST00000402667 C9orf84Q5VXU9 1444 aa23.84■■□□□ 1.41
DNMT3A-205ENST00000402667 NBPF8Q3BBV2 869 aa23.82■■□□□ 1.4
DNMT3A-205ENST00000402667 TSPY4P0CV99 314 aa23.81■■□□□ 1.4
DNMT3A-205ENST00000402667 TSPY10P0CW01 314 aa23.81■■□□□ 1.4
DNMT3A-205ENST00000402667 KIAA1107Q9UPP5 1409 aa23.81■■□□□ 1.4
DNMT3A-205ENST00000402667 WASHC2AQ641Q2 1341 aa23.8■■□□□ 1.4
DNMT3A-205ENST00000402667 HNRNPMP52272 730 aaKnown RBP eCLIP23.8■■□□□ 1.4
DNMT3A-205ENST00000402667 PKD2Q13563 968 aa23.78■■□□□ 1.4
DNMT3A-205ENST00000402667 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
DNMT3A-205ENST00000402667 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
DNMT3A-205ENST00000402667 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
DNMT3A-205ENST00000402667 CDC42BPBQ9Y5S2 1711 aa23.75■■□□□ 1.39
DNMT3A-205ENST00000402667 PREX2Q70Z35 1606 aa23.74■■□□□ 1.39
DNMT3A-205ENST00000402667 SAMD9LQ8IVG5 1584 aa23.73■■□□□ 1.39
DNMT3A-205ENST00000402667 NUP155O75694 1391 aa23.73■■□□□ 1.39
DNMT3A-205ENST00000402667 KIF15Q9NS87 1388 aa23.72■■□□□ 1.39
DNMT3A-205ENST00000402667 ABCC2Q92887 1545 aa23.71■■□□□ 1.39
DNMT3A-205ENST00000402667 CCDC141Q6ZP82 1450 aa23.7■■□□□ 1.38
DNMT3A-205ENST00000402667 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
DNMT3A-205ENST00000402667 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
DNMT3A-205ENST00000402667 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
DNMT3A-205ENST00000402667 SPATA31E1Q6ZUB1 1445 aa23.67■■□□□ 1.38
DNMT3A-205ENST00000402667 SUPT16HQ9Y5B9 1047 aaKnown RBP23.67■■□□□ 1.38
DNMT3A-205ENST00000402667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.67■■□□□ 1.38
DNMT3A-205ENST00000402667 TTC37Q6PGP7 1564 aa23.67■■□□□ 1.38
DNMT3A-205ENST00000402667 CCDC7Q96M83 1385 aa23.66■■□□□ 1.38
DNMT3A-205ENST00000402667 CNTLNQ9NXG0 1405 aa23.64■■□□□ 1.37
DNMT3A-205ENST00000402667 ARHGAP5Q13017 1502 aa23.64■■□□□ 1.37
DNMT3A-205ENST00000402667 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
DNMT3A-205ENST00000402667 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
DNMT3A-205ENST00000402667 MYO5CQ9NQX4 1742 aa23.57■■□□□ 1.36
DNMT3A-205ENST00000402667 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
DNMT3A-205ENST00000402667 KIF7Q2M1P5 1343 aa23.57■■□□□ 1.36
DNMT3A-205ENST00000402667 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
DNMT3A-205ENST00000402667 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
DNMT3A-205ENST00000402667 PLEKHH2Q8IVE3 1493 aa23.55■■□□□ 1.36
DNMT3A-205ENST00000402667 UHRF1BP1Q6BDS2 1440 aa23.54■■□□□ 1.36
DNMT3A-205ENST00000402667 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
DNMT3A-205ENST00000402667 FAM135AQ9P2D6 1515 aa23.53■■□□□ 1.36
DNMT3A-205ENST00000402667 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
DNMT3A-205ENST00000402667 ARHGEF12Q9NZN5 1544 aa23.52■■□□□ 1.36
DNMT3A-205ENST00000402667 USP47Q96K76 1375 aa23.51■■□□□ 1.35
DNMT3A-205ENST00000402667 PLCH2O75038 1416 aa23.51■■□□□ 1.35
DNMT3A-205ENST00000402667 PRKRIP1Q9H875 184 aaPredicted RBP23.49■■□□□ 1.35
DNMT3A-205ENST00000402667 PLXNC1O60486 1568 aa23.48■■□□□ 1.35
DNMT3A-205ENST00000402667 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
DNMT3A-205ENST00000402667 EFCAB2Q5VUJ9 269 aa23.47■■□□□ 1.35
DNMT3A-205ENST00000402667 UNC13BO14795 1591 aa23.46■■□□□ 1.35
DNMT3A-205ENST00000402667 KDM5CP41229 1560 aa23.46■■□□□ 1.35
DNMT3A-205ENST00000402667 KDM2AQ9Y2K7 1162 aa23.45■■□□□ 1.34
DNMT3A-205ENST00000402667 BCORL1Q5H9F3 1711 aa23.44■■□□□ 1.34
DNMT3A-205ENST00000402667 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
DNMT3A-205ENST00000402667 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
DNMT3A-205ENST00000402667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.346e-7■■□□□ 13.3
DNMT3A-205ENST00000402667 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
DNMT3A-205ENST00000402667 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
DNMT3A-205ENST00000402667 DUOX2Q9NRD8 1548 aa23.42■■□□□ 1.34
DNMT3A-205ENST00000402667 CCDC144AA2RUR9 1427 aa23.4■■□□□ 1.34
DNMT3A-205ENST00000402667 FKBP8Q14318 412 aa23.39■■□□□ 1.34
DNMT3A-205ENST00000402667 ARID4BQ4LE39 1312 aaPredicted RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms