RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 SCAPERQ9BY12 1400 aa38.79■■■■□ 3.8
RSPO4-202ENST00000400634 CDC42BPBQ9Y5S2 1711 aa38.77■■■■□ 3.8
RSPO4-202ENST00000400634 PREX2Q70Z35 1606 aa38.75■■■■□ 3.79
RSPO4-202ENST00000400634 POGZQ7Z3K3 1410 aa38.75■■■■□ 3.79
RSPO4-202ENST00000400634 MAGI2Q86UL8 1455 aa38.74■■■■□ 3.79
RSPO4-202ENST00000400634 ZFYVE16Q7Z3T8 1539 aa38.69■■■■□ 3.78
RSPO4-202ENST00000400634 CDC42BPAQ5VT25 1732 aa38.69■■■■□ 3.78
RSPO4-202ENST00000400634 LOC105371045A0A1W2PR82 267 aa38.66■■■■□ 3.78
RSPO4-202ENST00000400634 ZNF518AQ6AHZ1 1483 aa38.64■■■■□ 3.78
RSPO4-202ENST00000400634 ARID4BQ4LE39 1312 aaPredicted RBP38.63■■■■□ 3.77
RSPO4-202ENST00000400634 BCORL1Q5H9F3 1711 aa38.62■■■■□ 3.77
RSPO4-202ENST00000400634 ADAMTSL3P82987 1691 aa38.62■■■■□ 3.77
RSPO4-202ENST00000400634 MTUS2Q5JR59 1369 aa38.61■■■■□ 3.77
RSPO4-202ENST00000400634 YEATS2Q9ULM3 1422 aa38.58■■■■□ 3.77
RSPO4-202ENST00000400634 ABCC1P33527 1531 aa38.56■■■■□ 3.76
RSPO4-202ENST00000400634 KDM5CP41229 1560 aa38.56■■■■□ 3.76
RSPO4-202ENST00000400634 EHBP1L1Q8N3D4 1523 aa38.53■■■■□ 3.76
RSPO4-202ENST00000400634 ITSN2Q9NZM3 1697 aa38.52■■■■□ 3.76
RSPO4-202ENST00000400634 GPATCH8Q9UKJ3 1502 aaKnown RBP38.52■■■■□ 3.76
RSPO4-202ENST00000400634 AFAP1Q8N556 730 aa38.49■■■■□ 3.75
RSPO4-202ENST00000400634 HECW2Q9P2P5 1572 aa38.48■■■■□ 3.75
RSPO4-202ENST00000400634 ATP10AO60312 1499 aa38.48■■■■□ 3.75
RSPO4-202ENST00000400634 CCNB3Q8WWL7 1395 aa38.47■■■■□ 3.75
RSPO4-202ENST00000400634 VPS8Q8N3P4 1428 aa38.46■■■■□ 3.75
RSPO4-202ENST00000400634 MADDQ8WXG6 1647 aa38.45■■■■□ 3.75
RSPO4-202ENST00000400634 C9orf84Q5VXU9 1444 aa38.45■■■■□ 3.75
RSPO4-202ENST00000400634 SIGLEC1Q9BZZ2 1709 aa38.43■■■■□ 3.74
RSPO4-202ENST00000400634 ARHGEF12Q9NZN5 1544 aa38.43■■■■□ 3.74
RSPO4-202ENST00000400634 PTPRMP28827 1452 aa38.43■■■■□ 3.74
RSPO4-202ENST00000400634 SAMD9LQ8IVG5 1584 aa38.43■■■■□ 3.74
RSPO4-202ENST00000400634 MLH3Q9UHC1 1453 aa38.42■■■■□ 3.74
RSPO4-202ENST00000400634 TRAPPC8Q9Y2L5 1435 aa38.41■■■■□ 3.74
RSPO4-202ENST00000400634 CFDP1Q9UEE9 299 aaPredicted RBP38.41■■■■□ 3.74
RSPO4-202ENST00000400634 MYT1LQ9UL68 1186 aa38.41■■■■□ 3.74
RSPO4-202ENST00000400634 ZNF777Q9ULD5 760 aaPredicted RBP38.41■■■■□ 3.74
RSPO4-202ENST00000400634 PLEKHH2Q8IVE3 1493 aa38.39■■■■□ 3.74
RSPO4-202ENST00000400634 TIAM1Q13009 1591 aa38.38■■■■□ 3.73
RSPO4-202ENST00000400634 RIMS1Q86UR5 1692 aaKnown RBP38.36■■■■□ 3.73
RSPO4-202ENST00000400634 SUPT6HQ7KZ85 1726 aaKnown RBP38.35■■■■□ 3.73
RSPO4-202ENST00000400634 SYCP2Q9BX26 1530 aa38.35■■■■□ 3.73
RSPO4-202ENST00000400634 DIP2CQ9Y2E4 1556 aa38.35■■■■□ 3.73
RSPO4-202ENST00000400634 KIAA1107Q9UPP5 1409 aa38.34■■■■□ 3.73
RSPO4-202ENST00000400634 REREQ9P2R6 1566 aa38.32■■■■□ 3.73
RSPO4-202ENST00000400634 ABCA6Q8N139 1617 aa38.31■■■■□ 3.72
RSPO4-202ENST00000400634 FER1L4A9Z1Z3 1794 aa38.29■■■■□ 3.72
RSPO4-202ENST00000400634 KIDINS220Q9ULH0 1771 aa38.29■■■■□ 3.72
RSPO4-202ENST00000400634 MLECQ14165 292 aa38.26■■■■□ 3.72
RSPO4-202ENST00000400634 MAP3K1Q13233 1512 aa38.25■■■■□ 3.71
RSPO4-202ENST00000400634 NCOA2Q15596 1464 aa38.25■■■■□ 3.71
RSPO4-202ENST00000400634 HNRNPMP52272 730 aaKnown RBP eCLIP38.24■■■■□ 3.71
RSPO4-202ENST00000400634 LRRC9Q6ZRR7 1453 aa38.22■■■■□ 3.71
RSPO4-202ENST00000400634 SPAG9O60271 1321 aaKnown RBP38.2■■■■□ 3.71
RSPO4-202ENST00000400634 AGLP35573 1532 aa38.18■■■■□ 3.7
RSPO4-202ENST00000400634 ATP7AQ04656 1500 aa38.15■■■■□ 3.7
RSPO4-202ENST00000400634 INO80Q9ULG1 1556 aaPredicted RBP38.14■■■■□ 3.7
RSPO4-202ENST00000400634 ZNF644Q9H582 1327 aaPredicted RBP38.12■■■■□ 3.69
RSPO4-202ENST00000400634 MBD5Q9P267 1494 aa38.09■■■■□ 3.69
RSPO4-202ENST00000400634 CAMSAP2Q08AD1 1489 aa38.05■■■■□ 3.68
RSPO4-202ENST00000400634 APLP2Q06481 763 aa38.05■■■■□ 3.68
RSPO4-202ENST00000400634 KANK4Q5T7N3 995 aaPredicted RBP38.02■■■■□ 3.68
RSPO4-202ENST00000400634 PLPPR3Q6T4P5 718 aa38.02■■■■□ 3.68
RSPO4-202ENST00000400634 ADGBQ8N7X0 1667 aa38.01■■■■□ 3.68
RSPO4-202ENST00000400634 RSPH4AQ5TD94 716 aa38.01■■■■□ 3.68
RSPO4-202ENST00000400634 CCDC141Q6ZP82 1450 aa37.99■■■■□ 3.67
RSPO4-202ENST00000400634 RTEL1-TNFRSF6BF6WH68 1400 aa37.99■■■■□ 3.67
RSPO4-202ENST00000400634 A2MP01023 1474 aa37.98■■■■□ 3.67
RSPO4-202ENST00000400634 LMTK3Q96Q04 1460 aa37.98■■■■□ 3.67
RSPO4-202ENST00000400634 ESF1Q9H501 851 aaKnown RBP37.98■■■■□ 3.67
RSPO4-202ENST00000400634 PLXNC1O60486 1568 aa37.97■■■■□ 3.67
RSPO4-202ENST00000400634 ARHGEF5Q12774 1597 aa37.94■■■■□ 3.66
RSPO4-202ENST00000400634 SETD1BQ9UPS6 1966 aaKnown RBP37.92■■■■□ 3.66
RSPO4-202ENST00000400634 CNTLNQ9NXG0 1405 aa37.92■■■■□ 3.66
RSPO4-202ENST00000400634 MYOM3Q5VTT5 1437 aa37.91■■■■□ 3.66
RSPO4-202ENST00000400634 MIA2Q96PC5 1412 aa37.9■■■■□ 3.66
RSPO4-202ENST00000400634 C3P01024 1663 aa37.88■■■■□ 3.66
RSPO4-202ENST00000400634 PREX1Q8TCU6 1659 aa37.88■■■■□ 3.65
RSPO4-202ENST00000400634 CEBPAP49715 358 aaPredicted RBP37.86■■■■□ 3.65
RSPO4-202ENST00000400634 MROH2AA6NES4 1674 aa37.84■■■■□ 3.65
RSPO4-202ENST00000400634 TSPY4P0CV99 314 aa37.83■■■■□ 3.65
RSPO4-202ENST00000400634 TSPY10P0CW01 314 aa37.83■■■■□ 3.65
RSPO4-202ENST00000400634 DHX29Q7Z478 1369 aaKnown RBP37.8■■■■□ 3.64
RSPO4-202ENST00000400634 PPP6R1Q9UPN7 881 aa37.76■■■■□ 3.64
RSPO4-202ENST00000400634 CLTCQ00610 1675 aaKnown RBP37.74■■■■□ 3.63
RSPO4-202ENST00000400634 MAST1Q9Y2H9 1570 aa37.74■■■■□ 3.63
RSPO4-202ENST00000400634 GGT6Q6P531 493 aa37.73■■■■□ 3.63
RSPO4-202ENST00000400634 HSPA2P54652 639 aa37.72■■■■□ 3.63
RSPO4-202ENST00000400634 UHRF1BP1Q6BDS2 1440 aa37.71■■■■□ 3.63
RSPO4-202ENST00000400634 PTPN23Q9H3S7 1636 aa37.69■■■■□ 3.62
RSPO4-202ENST00000400634 ZMYM3Q14202 1370 aa37.68■■■■□ 3.62
RSPO4-202ENST00000400634 NPATQ14207 1427 aa37.65■■■■□ 3.62
RSPO4-202ENST00000400634 KIF3BO15066 747 aa37.63■■■■□ 3.61
RSPO4-202ENST00000400634 FGD6Q6ZV73 1430 aa37.62■■■■□ 3.61
RSPO4-202ENST00000400634 FAM135AQ9P2D6 1515 aa37.61■■■■□ 3.61
RSPO4-202ENST00000400634 CROCC2H7BZ55 1655 aa37.6■■■■□ 3.61
RSPO4-202ENST00000400634 TCOF1Q13428 1488 aaKnown RBP37.58■■■■□ 3.61
RSPO4-202ENST00000400634 SHANK2Q9UPX8 1470 aa37.57■■■■□ 3.6
RSPO4-202ENST00000400634 DNMT1P26358 1616 aaKnown RBP37.54■■■■□ 3.6
RSPO4-202ENST00000400634 EIF2AK4Q9P2K8 1649 aaKnown RBP37.54■■■■□ 3.6
RSPO4-202ENST00000400634 KDM5DQ9BY66 1539 aa37.52■■■■□ 3.6
RSPO4-202ENST00000400634 ABCC5O15440 1437 aa37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms