RNA–Protein interactions for RNA: ENST00000399696.3

POLR1D-202, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene POLR1D, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-202ENST00000399696 KIF3CO14782 793 aa11.69□□□□□ -0.54
POLR1D-202ENST00000399696 MFSD10Q14728 455 aa11.69□□□□□ -0.54
POLR1D-202ENST00000399696 GPHNQ9NQX3 736 aaPredicted RBP11.68□□□□□ -0.54
POLR1D-202ENST00000399696 G3V3G9 751 aa11.67□□□□□ -0.54
POLR1D-202ENST00000399696 PDE4AP27815 886 aa11.67□□□□□ -0.54
POLR1D-202ENST00000399696 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
POLR1D-202ENST00000399696 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
POLR1D-202ENST00000399696 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
POLR1D-202ENST00000399696 FOXK1P85037 733 aa11.6□□□□□ -0.55
POLR1D-202ENST00000399696 DSG2Q14126 1118 aa11.6□□□□□ -0.55
POLR1D-202ENST00000399696 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
POLR1D-202ENST00000399696 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
POLR1D-202ENST00000399696 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.58□□□□□ -0.56
POLR1D-202ENST00000399696 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
POLR1D-202ENST00000399696 PPP1R15BQ5SWA1 713 aa11.57□□□□□ -0.56
POLR1D-202ENST00000399696 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
POLR1D-202ENST00000399696 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
POLR1D-202ENST00000399696 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
POLR1D-202ENST00000399696 E2F4Q16254 413 aa11.53□□□□□ -0.56
POLR1D-202ENST00000399696 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
POLR1D-202ENST00000399696 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
POLR1D-202ENST00000399696 LHX8Q68G74 356 aa11.51□□□□□ -0.57
POLR1D-202ENST00000399696 SCUBE2Q9NQ36 999 aa11.51□□□□□ -0.57
POLR1D-202ENST00000399696 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
POLR1D-202ENST00000399696 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
POLR1D-202ENST00000399696 ARIH1Q9Y4X5 557 aaPredicted RBP11.49□□□□□ -0.57
POLR1D-202ENST00000399696 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
POLR1D-202ENST00000399696 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
POLR1D-202ENST00000399696 SLC34A2O95436 690 aa11.42□□□□□ -0.58
POLR1D-202ENST00000399696 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
POLR1D-202ENST00000399696 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
POLR1D-202ENST00000399696 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
POLR1D-202ENST00000399696 BCANQ96GW7 911 aa11.38□□□□□ -0.59
POLR1D-202ENST00000399696 DPYSL4O14531 572 aa11.37□□□□□ -0.59
POLR1D-202ENST00000399696 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
POLR1D-202ENST00000399696 PDIA6Q15084 440 aa11.33□□□□□ -0.6
POLR1D-202ENST00000399696 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
POLR1D-202ENST00000399696 NBR1Q14596 966 aa11.31□□□□□ -0.6
POLR1D-202ENST00000399696 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
POLR1D-202ENST00000399696 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
POLR1D-202ENST00000399696 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
POLR1D-202ENST00000399696 SEMA3EO15041 775 aa11.29□□□□□ -0.6
POLR1D-202ENST00000399696 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
POLR1D-202ENST00000399696 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
POLR1D-202ENST00000399696 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
POLR1D-202ENST00000399696 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
POLR1D-202ENST00000399696 SNPHO15079 494 aa11.27□□□□□ -0.61
POLR1D-202ENST00000399696 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.61
POLR1D-202ENST00000399696 TBC1D12O60347 775 aa11.26□□□□□ -0.61
POLR1D-202ENST00000399696 EVI5O60447 810 aa11.25□□□□□ -0.61
POLR1D-202ENST00000399696 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
POLR1D-202ENST00000399696 PTGER2P43116 358 aa11.23□□□□□ -0.61
POLR1D-202ENST00000399696 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
POLR1D-202ENST00000399696 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
POLR1D-202ENST00000399696 MLLT3P42568 568 aaPredicted RBP11.22□□□□□ -0.61
POLR1D-202ENST00000399696 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
POLR1D-202ENST00000399696 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
POLR1D-202ENST00000399696 NUDT7P0C024 238 aa11.18□□□□□ -0.62
POLR1D-202ENST00000399696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
POLR1D-202ENST00000399696 ST18O60284 1047 aa11.15□□□□□ -0.62
POLR1D-202ENST00000399696 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
POLR1D-202ENST00000399696 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
POLR1D-202ENST00000399696 OSBPP22059 807 aa11.13□□□□□ -0.63
POLR1D-202ENST00000399696 DDX12PQ92771 950 aa11.13□□□□□ -0.63
POLR1D-202ENST00000399696 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
POLR1D-202ENST00000399696 PCDHGA10Q9Y5H3 936 aa11.12□□□□□ -0.63
POLR1D-202ENST00000399696 GRXCR2A6NFK2 248 aa11.11□□□□□ -0.63
POLR1D-202ENST00000399696 FOSBP53539 338 aa11.11□□□□□ -0.63
POLR1D-202ENST00000399696 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
POLR1D-202ENST00000399696 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
POLR1D-202ENST00000399696 PHF14O94880 888 aa11.1□□□□□ -0.63
POLR1D-202ENST00000399696 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
POLR1D-202ENST00000399696 LMOD2Q6P5Q4 547 aa11.1□□□□□ -0.63
POLR1D-202ENST00000399696 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
POLR1D-202ENST00000399696 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
POLR1D-202ENST00000399696 EPAS1Q99814 870 aa11.07□□□□□ -0.64
POLR1D-202ENST00000399696 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
POLR1D-202ENST00000399696 TYW1BQ6NUM6 668 aa11.04□□□□□ -0.64
POLR1D-202ENST00000399696 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
POLR1D-202ENST00000399696 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
POLR1D-202ENST00000399696 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
POLR1D-202ENST00000399696 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
POLR1D-202ENST00000399696 GPR37O15354 613 aa11.02□□□□□ -0.65
POLR1D-202ENST00000399696 FBXW7Q969H0 707 aa11.02□□□□□ -0.65
POLR1D-202ENST00000399696 ZDHHC16Q969W1 377 aa11.01□□□□□ -0.65
POLR1D-202ENST00000399696 ADAM33Q9BZ11 813 aa11.01□□□□□ -0.65
POLR1D-202ENST00000399696 POTEB3A0JP26 581 aa10.99□□□□□ -0.65
POLR1D-202ENST00000399696 EMP3P54852 163 aa10.99□□□□□ -0.65
POLR1D-202ENST00000399696 POTEBQ6S5H4 581 aa10.99□□□□□ -0.65
POLR1D-202ENST00000399696 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
POLR1D-202ENST00000399696 ZC3H15Q8WU90 426 aaKnown RBP10.98□□□□□ -0.65
POLR1D-202ENST00000399696 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
POLR1D-202ENST00000399696 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
POLR1D-202ENST00000399696 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
POLR1D-202ENST00000399696 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
POLR1D-202ENST00000399696 ERBB3P21860 1342 aa10.97□□□□□ -0.65
POLR1D-202ENST00000399696 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
POLR1D-202ENST00000399696 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
POLR1D-202ENST00000399696 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
POLR1D-202ENST00000399696 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms