RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 PZPP20742 1482 aa19.03■□□□□ 0.64
SEC24B-202ENST00000399100 RPRD2Q5VT52 1461 aaKnown RBP19.02■□□□□ 0.64
SEC24B-202ENST00000399100 ITGAEP38570 1179 aa19.02■□□□□ 0.63
SEC24B-202ENST00000399100 CDC42BPBQ9Y5S2 1711 aa19.01■□□□□ 0.63
SEC24B-202ENST00000399100 SHANK2Q9UPX8 1470 aa19■□□□□ 0.63
SEC24B-202ENST00000399100 FAM50AQ14320 339 aaKnown RBP19■□□□□ 0.63
SEC24B-202ENST00000399100 SPATA31E1Q6ZUB1 1445 aa19■□□□□ 0.63
SEC24B-202ENST00000399100 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
SEC24B-202ENST00000399100 CAMSAP2Q08AD1 1489 aa18.99■□□□□ 0.63
SEC24B-202ENST00000399100 ARHGEF5Q12774 1597 aa18.99■□□□□ 0.63
SEC24B-202ENST00000399100 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
SEC24B-202ENST00000399100 PREX2Q70Z35 1606 aa18.97■□□□□ 0.63
SEC24B-202ENST00000399100 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
SEC24B-202ENST00000399100 E9PCH4 1651 aa18.94■□□□□ 0.62
SEC24B-202ENST00000399100 CHD1O14646 1710 aa18.94■□□□□ 0.62
SEC24B-202ENST00000399100 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
SEC24B-202ENST00000399100 PLB1Q6P1J6 1458 aa18.93■□□□□ 0.62
SEC24B-202ENST00000399100 BCORL1Q5H9F3 1711 aa18.92■□□□□ 0.62
SEC24B-202ENST00000399100 KDM5CP41229 1560 aa18.9■□□□□ 0.62
SEC24B-202ENST00000399100 KCNH8Q96L42 1107 aa18.9■□□□□ 0.62
SEC24B-202ENST00000399100 PTPRGP23470 1445 aa18.9■□□□□ 0.62
SEC24B-202ENST00000399100 NCOA1Q15788 1441 aa18.89■□□□□ 0.62
SEC24B-202ENST00000399100 CCER2I3L3R5 266 aa18.89■□□□□ 0.61
SEC24B-202ENST00000399100 UNC13BO14795 1591 aa18.87■□□□□ 0.61
SEC24B-202ENST00000399100 SAMD9LQ8IVG5 1584 aa18.87■□□□□ 0.61
SEC24B-202ENST00000399100 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
SEC24B-202ENST00000399100 ATP10BO94823 1461 aa18.85■□□□□ 0.61
SEC24B-202ENST00000399100 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
SEC24B-202ENST00000399100 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.6
SEC24B-202ENST00000399100 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
SEC24B-202ENST00000399100 UHRF1BP1Q6BDS2 1440 aa18.82■□□□□ 0.6
SEC24B-202ENST00000399100 LAMC1P11047 1609 aa18.82■□□□□ 0.6
SEC24B-202ENST00000399100 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
SEC24B-202ENST00000399100 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
SEC24B-202ENST00000399100 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
SEC24B-202ENST00000399100 MYO5CQ9NQX4 1742 aa18.76■□□□□ 0.59
SEC24B-202ENST00000399100 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
SEC24B-202ENST00000399100 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
SEC24B-202ENST00000399100 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
SEC24B-202ENST00000399100 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
SEC24B-202ENST00000399100 IQGAP3Q86VI3 1631 aa18.75■□□□□ 0.59
SEC24B-202ENST00000399100 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
SEC24B-202ENST00000399100 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
SEC24B-202ENST00000399100 ZNF644Q9H582 1327 aaPredicted RBP18.73■□□□□ 0.59
SEC24B-202ENST00000399100 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
SEC24B-202ENST00000399100 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
SEC24B-202ENST00000399100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.7■□□□□ 0.58
SEC24B-202ENST00000399100 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
SEC24B-202ENST00000399100 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
SEC24B-202ENST00000399100 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
SEC24B-202ENST00000399100 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
SEC24B-202ENST00000399100 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
SEC24B-202ENST00000399100 DEPDC5O75140 1603 aa18.67■□□□□ 0.58
SEC24B-202ENST00000399100 NBPF8Q3BBV2 869 aa18.66■□□□□ 0.58
SEC24B-202ENST00000399100 ARID3CA6NKF2 412 aa18.65■□□□□ 0.58
SEC24B-202ENST00000399100 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
SEC24B-202ENST00000399100 C11orf95C9JLR9 678 aaPredicted RBP18.65■□□□□ 0.58
SEC24B-202ENST00000399100 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
SEC24B-202ENST00000399100 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
SEC24B-202ENST00000399100 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
SEC24B-202ENST00000399100 ZCCHC11Q5TAX3 1644 aaKnown RBP18.63■□□□□ 0.57
SEC24B-202ENST00000399100 ATP10AO60312 1499 aa18.63■□□□□ 0.57
SEC24B-202ENST00000399100 C9orf84Q5VXU9 1444 aa18.62■□□□□ 0.57
SEC24B-202ENST00000399100 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
SEC24B-202ENST00000399100 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
SEC24B-202ENST00000399100 UHRF1BP1LA0JNW5 1464 aa18.61■□□□□ 0.57
SEC24B-202ENST00000399100 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
SEC24B-202ENST00000399100 ARAP3Q8WWN8 1544 aa18.6■□□□□ 0.57
SEC24B-202ENST00000399100 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
SEC24B-202ENST00000399100 ANKRD50Q9ULJ7 1429 aa18.59■□□□□ 0.57
SEC24B-202ENST00000399100 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.57
SEC24B-202ENST00000399100 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.56
SEC24B-202ENST00000399100 PLA2R1Q13018 1463 aa18.57■□□□□ 0.56
SEC24B-202ENST00000399100 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
SEC24B-202ENST00000399100 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
SEC24B-202ENST00000399100 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
SEC24B-202ENST00000399100 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
SEC24B-202ENST00000399100 CEP152O94986 1710 aa18.56■□□□□ 0.56
SEC24B-202ENST00000399100 ABCC1P33527 1531 aa18.55■□□□□ 0.56
SEC24B-202ENST00000399100 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
SEC24B-202ENST00000399100 VWDEQ8N2E2 1590 aa18.55■□□□□ 0.56
SEC24B-202ENST00000399100 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
SEC24B-202ENST00000399100 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
SEC24B-202ENST00000399100 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
SEC24B-202ENST00000399100 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.55
SEC24B-202ENST00000399100 IFT172Q9UG01 1749 aa18.52■□□□□ 0.55
SEC24B-202ENST00000399100 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
SEC24B-202ENST00000399100 FOXD1Q16676 465 aa18.5■□□□□ 0.55
SEC24B-202ENST00000399100 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
SEC24B-202ENST00000399100 TSHZ2Q9NRE2 1034 aa18.49■□□□□ 0.55
SEC24B-202ENST00000399100 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
SEC24B-202ENST00000399100 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
SEC24B-202ENST00000399100 ANP32CO43423 234 aa18.47■□□□□ 0.55
SEC24B-202ENST00000399100 GPRASP1Q5JY77 1395 aa18.47■□□□□ 0.55
SEC24B-202ENST00000399100 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
SEC24B-202ENST00000399100 KIAA1210Q9ULL0 1709 aa18.46■□□□□ 0.55
SEC24B-202ENST00000399100 MROH1Q8NDA8 1641 aa18.46■□□□□ 0.55
SEC24B-202ENST00000399100 EIF2AK4Q9P2K8 1649 aaKnown RBP18.46■□□□□ 0.55
SEC24B-202ENST00000399100 DUOX2Q9NRD8 1548 aa18.46■□□□□ 0.55
SEC24B-202ENST00000399100 MADDQ8WXG6 1647 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms