RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
CAPN11-201ENST00000398776 NEFLP07196 543 aa13.92□□□□□ -0.18
CAPN11-201ENST00000398776 ADCY10Q96PN6 1610 aa13.92□□□□□ -0.18
CAPN11-201ENST00000398776 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
CAPN11-201ENST00000398776 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
CAPN11-201ENST00000398776 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
CAPN11-201ENST00000398776 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
CAPN11-201ENST00000398776 PPP1R15AO75807 674 aaPredicted RBP13.9□□□□□ -0.18
CAPN11-201ENST00000398776 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
CAPN11-201ENST00000398776 DAPK1P53355 1430 aa13.87□□□□□ -0.19
CAPN11-201ENST00000398776 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
CAPN11-201ENST00000398776 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
CAPN11-201ENST00000398776 ABCA8O94911 1581 aa13.87□□□□□ -0.19
CAPN11-201ENST00000398776 FBLN2P98095 1184 aa13.86□□□□□ -0.19
CAPN11-201ENST00000398776 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
CAPN11-201ENST00000398776 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
CAPN11-201ENST00000398776 ABCC5O15440 1437 aa13.84□□□□□ -0.19
CAPN11-201ENST00000398776 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
CAPN11-201ENST00000398776 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
CAPN11-201ENST00000398776 PRG4Q92954 1404 aaPredicted RBP13.83□□□□□ -0.2
CAPN11-201ENST00000398776 ERICH6BQ5W0A0 696 aa13.83□□□□□ -0.2
CAPN11-201ENST00000398776 KDM6BO15054 1643 aa13.83□□□□□ -0.2
CAPN11-201ENST00000398776 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
CAPN11-201ENST00000398776 DEKP35659 375 aaKnown RBP13.82□□□□□ -0.2
CAPN11-201ENST00000398776 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
CAPN11-201ENST00000398776 DENND4BO75064 1496 aaPredicted RBP13.82□□□□□ -0.2
CAPN11-201ENST00000398776 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
CAPN11-201ENST00000398776 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
CAPN11-201ENST00000398776 KIF14Q15058 1648 aa13.81□□□□□ -0.2
CAPN11-201ENST00000398776 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
CAPN11-201ENST00000398776 CROCC2H7BZ55 1655 aa13.8□□□□□ -0.2
CAPN11-201ENST00000398776 KDM5BQ9UGL1 1544 aa13.8□□□□□ -0.2
CAPN11-201ENST00000398776 ADGRL2O95490 1459 aa13.79□□□□□ -0.2
CAPN11-201ENST00000398776 ATP10BO94823 1461 aa13.78□□□□□ -0.2
CAPN11-201ENST00000398776 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
CAPN11-201ENST00000398776 CHD1O14646 1710 aa13.78□□□□□ -0.2
CAPN11-201ENST00000398776 MPHOSPH9Q99550 1183 aa13.77□□□□□ -0.2
CAPN11-201ENST00000398776 CDC42BPAQ5VT25 1732 aa13.77□□□□□ -0.2
CAPN11-201ENST00000398776 SHROOM2Q13796 1616 aa13.77□□□□□ -0.21
CAPN11-201ENST00000398776 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
CAPN11-201ENST00000398776 PLEKHD1A6NEE1 506 aa13.77□□□□□ -0.21
CAPN11-201ENST00000398776 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
CAPN11-201ENST00000398776 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
CAPN11-201ENST00000398776 NCOA1Q15788 1441 aa13.75□□□□□ -0.21
CAPN11-201ENST00000398776 PTPRGP23470 1445 aa13.74□□□□□ -0.21
CAPN11-201ENST00000398776 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
CAPN11-201ENST00000398776 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
CAPN11-201ENST00000398776 ANP32CO43423 234 aa13.71□□□□□ -0.21
CAPN11-201ENST00000398776 IRX6P78412 446 aaPredicted RBP13.71□□□□□ -0.21
CAPN11-201ENST00000398776 RPRD2Q5VT52 1461 aaKnown RBP13.71□□□□□ -0.21
CAPN11-201ENST00000398776 ANKRD30AQ9BXX3 1397 aa13.71□□□□□ -0.21
CAPN11-201ENST00000398776 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
CAPN11-201ENST00000398776 PZPP20742 1482 aa13.67□□□□□ -0.22
CAPN11-201ENST00000398776 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
CAPN11-201ENST00000398776 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
CAPN11-201ENST00000398776 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
CAPN11-201ENST00000398776 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
CAPN11-201ENST00000398776 TEX14Q8IWB6 1497 aa13.65□□□□□ -0.22
CAPN11-201ENST00000398776 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
CAPN11-201ENST00000398776 C9orf84Q5VXU9 1444 aa13.65□□□□□ -0.22
CAPN11-201ENST00000398776 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
CAPN11-201ENST00000398776 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CAPN11-201ENST00000398776 ANKRD50Q9ULJ7 1429 aa13.64□□□□□ -0.23
CAPN11-201ENST00000398776 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
CAPN11-201ENST00000398776 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
CAPN11-201ENST00000398776 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
CAPN11-201ENST00000398776 L3MBTL2Q969R5 705 aa13.63□□□□□ -0.23
CAPN11-201ENST00000398776 KIAA1107Q9UPP5 1409 aa13.63□□□□□ -0.23
CAPN11-201ENST00000398776 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
CAPN11-201ENST00000398776 CLASP1Q7Z460 1538 aa13.62□□□□□ -0.23
CAPN11-201ENST00000398776 SAMD9LQ8IVG5 1584 aa13.61□□□□□ -0.23
CAPN11-201ENST00000398776 TSPY4P0CV99 314 aa13.61□□□□□ -0.23
CAPN11-201ENST00000398776 TSPY10P0CW01 314 aa13.61□□□□□ -0.23
CAPN11-201ENST00000398776 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
CAPN11-201ENST00000398776 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
CAPN11-201ENST00000398776 FOXD1Q16676 465 aa13.61□□□□□ -0.23
CAPN11-201ENST00000398776 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
CAPN11-201ENST00000398776 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
CAPN11-201ENST00000398776 UHRF1BP1LA0JNW5 1464 aa13.59□□□□□ -0.23
CAPN11-201ENST00000398776 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
CAPN11-201ENST00000398776 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
CAPN11-201ENST00000398776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
CAPN11-201ENST00000398776 POLR1AO95602 1720 aaPredicted RBP13.57□□□□□ -0.24
CAPN11-201ENST00000398776 PLEKHH2Q8IVE3 1493 aa13.57□□□□□ -0.24
CAPN11-201ENST00000398776 ERCC6L2Q5T890 1561 aa13.57□□□□□ -0.24
CAPN11-201ENST00000398776 TTC37Q6PGP7 1564 aa13.57□□□□□ -0.24
CAPN11-201ENST00000398776 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
CAPN11-201ENST00000398776 NBR1Q14596 966 aa13.56□□□□□ -0.24
CAPN11-201ENST00000398776 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
CAPN11-201ENST00000398776 PKD2Q13563 968 aa13.55□□□□□ -0.24
CAPN11-201ENST00000398776 NUP155O75694 1391 aa13.54□□□□□ -0.24
CAPN11-201ENST00000398776 HNRNPMP52272 730 aaKnown RBP eCLIP13.54□□□□□ -0.24
CAPN11-201ENST00000398776 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
CAPN11-201ENST00000398776 SPATA31E1Q6ZUB1 1445 aa13.54□□□□□ -0.24
CAPN11-201ENST00000398776 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
CAPN11-201ENST00000398776 PLXNC1O60486 1568 aa13.53□□□□□ -0.24
CAPN11-201ENST00000398776 ZCCHC11Q5TAX3 1644 aaKnown RBP13.53□□□□□ -0.24
CAPN11-201ENST00000398776 NBPF8Q3BBV2 869 aa13.53□□□□□ -0.24
CAPN11-201ENST00000398776 ARHGEF12Q9NZN5 1544 aa13.53□□□□□ -0.24
CAPN11-201ENST00000398776 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms