RNA–Protein interactions for RNA: ENST00000398409.1

CST3-202, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CST3, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-202ENST00000398409 ZMYM4Q5VZL5 1548 aa28.64■■■□□ 2.17
CST3-202ENST00000398409 POGZQ7Z3K3 1410 aa28.62■■■□□ 2.17
CST3-202ENST00000398409 ARID4BQ4LE39 1312 aaPredicted RBP28.62■■■□□ 2.17
CST3-202ENST00000398409 MTUS2Q5JR59 1369 aa28.59■■■□□ 2.17
CST3-202ENST00000398409 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
CST3-202ENST00000398409 ARHGEF40Q8TER5 1519 aa28.58■■■□□ 2.17
CST3-202ENST00000398409 ZFYVE16Q7Z3T8 1539 aa28.56■■■□□ 2.16
CST3-202ENST00000398409 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
CST3-202ENST00000398409 PREX2Q70Z35 1606 aa28.53■■■□□ 2.16
CST3-202ENST00000398409 CDC42BPBQ9Y5S2 1711 aa28.51■■■□□ 2.15
CST3-202ENST00000398409 CCNB3Q8WWL7 1395 aa28.5■■■□□ 2.15
CST3-202ENST00000398409 MYT1LQ9UL68 1186 aa28.48■■■□□ 2.15
CST3-202ENST00000398409 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
CST3-202ENST00000398409 ATP10AO60312 1499 aa28.46■■■□□ 2.15
CST3-202ENST00000398409 AFAP1Q8N556 730 aa28.46■■■□□ 2.15
CST3-202ENST00000398409 YEATS2Q9ULM3 1422 aa28.45■■■□□ 2.15
CST3-202ENST00000398409 GPATCH8Q9UKJ3 1502 aaKnown RBP28.45■■■□□ 2.15
CST3-202ENST00000398409 ADAMTSL3P82987 1691 aa28.45■■■□□ 2.14
CST3-202ENST00000398409 EHBP1L1Q8N3D4 1523 aa28.44■■■□□ 2.14
CST3-202ENST00000398409 BCORL1Q5H9F3 1711 aa28.44■■■□□ 2.14
CST3-202ENST00000398409 PLEKHH2Q8IVE3 1493 aa28.44■■■□□ 2.14
CST3-202ENST00000398409 KDM5CP41229 1560 aa28.44■■■□□ 2.14
CST3-202ENST00000398409 VPS8Q8N3P4 1428 aa28.43■■■□□ 2.14
CST3-202ENST00000398409 CDC42BPAQ5VT25 1732 aa28.43■■■□□ 2.14
CST3-202ENST00000398409 C9orf84Q5VXU9 1444 aa28.43■■■□□ 2.14
CST3-202ENST00000398409 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
CST3-202ENST00000398409 ZNF777Q9ULD5 760 aaPredicted RBP28.42■■■□□ 2.14
CST3-202ENST00000398409 ABCC1P33527 1531 aa28.42■■■□□ 2.14
CST3-202ENST00000398409 KIAA1107Q9UPP5 1409 aa28.4■■■□□ 2.14
CST3-202ENST00000398409 PTPRMP28827 1452 aa28.38■■■□□ 2.13
CST3-202ENST00000398409 HECW2Q9P2P5 1572 aa28.37■■■□□ 2.13
CST3-202ENST00000398409 ITSN2Q9NZM3 1697 aa28.34■■■□□ 2.13
CST3-202ENST00000398409 TRAPPC8Q9Y2L5 1435 aa28.34■■■□□ 2.13
CST3-202ENST00000398409 ARHGEF12Q9NZN5 1544 aa28.32■■■□□ 2.12
CST3-202ENST00000398409 MAP3K1Q13233 1512 aa28.31■■■□□ 2.12
CST3-202ENST00000398409 REREQ9P2R6 1566 aa28.31■■■□□ 2.12
CST3-202ENST00000398409 SPAG9O60271 1321 aaKnown RBP28.3■■■□□ 2.12
CST3-202ENST00000398409 APLP2Q06481 763 aa28.3■■■□□ 2.12
CST3-202ENST00000398409 RSPH4AQ5TD94 716 aa28.3■■■□□ 2.12
CST3-202ENST00000398409 MADDQ8WXG6 1647 aa28.29■■■□□ 2.12
CST3-202ENST00000398409 TIAM1Q13009 1591 aa28.29■■■□□ 2.12
CST3-202ENST00000398409 SAMD9LQ8IVG5 1584 aa28.29■■■□□ 2.12
CST3-202ENST00000398409 SUPT6HQ7KZ85 1726 aaKnown RBP28.29■■■□□ 2.12
CST3-202ENST00000398409 HNRNPMP52272 730 aaKnown RBP eCLIP28.28■■■□□ 2.12
CST3-202ENST00000398409 MLECQ14165 292 aa28.27■■■□□ 2.12
CST3-202ENST00000398409 SYCP2Q9BX26 1530 aa28.26■■■□□ 2.11
CST3-202ENST00000398409 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
CST3-202ENST00000398409 NCOA2Q15596 1464 aa28.24■■■□□ 2.11
CST3-202ENST00000398409 ESF1Q9H501 851 aaKnown RBP28.23■■■□□ 2.11
CST3-202ENST00000398409 AGLP35573 1532 aa28.23■■■□□ 2.11
CST3-202ENST00000398409 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
CST3-202ENST00000398409 RIMS1Q86UR5 1692 aaKnown RBP28.2■■■□□ 2.11
CST3-202ENST00000398409 KIDINS220Q9ULH0 1771 aa28.19■■■□□ 2.1
CST3-202ENST00000398409 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
CST3-202ENST00000398409 FER1L4A9Z1Z3 1794 aa28.16■■■□□ 2.1
CST3-202ENST00000398409 SIGLEC1Q9BZZ2 1709 aa28.16■■■□□ 2.1
CST3-202ENST00000398409 RTEL1-TNFRSF6BF6WH68 1400 aa28.15■■■□□ 2.1
CST3-202ENST00000398409 ATP7AQ04656 1500 aa28.14■■■□□ 2.1
CST3-202ENST00000398409 MBD5Q9P267 1494 aa28.13■■■□□ 2.09
CST3-202ENST00000398409 ZNF644Q9H582 1327 aaPredicted RBP28.13■■■□□ 2.09
CST3-202ENST00000398409 TSPY4P0CV99 314 aa28.11■■■□□ 2.09
CST3-202ENST00000398409 TSPY10P0CW01 314 aa28.11■■■□□ 2.09
CST3-202ENST00000398409 CNTLNQ9NXG0 1405 aa28.1■■■□□ 2.09
CST3-202ENST00000398409 PPP6R1Q9UPN7 881 aa28.09■■■□□ 2.09
CST3-202ENST00000398409 INO80Q9ULG1 1556 aaPredicted RBP28.08■■■□□ 2.09
CST3-202ENST00000398409 MIA2Q96PC5 1412 aa28.08■■■□□ 2.09
CST3-202ENST00000398409 A2MP01023 1474 aa28.08■■■□□ 2.09
CST3-202ENST00000398409 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
CST3-202ENST00000398409 KANK4Q5T7N3 995 aaPredicted RBP28.07■■■□□ 2.08
CST3-202ENST00000398409 CAMSAP2Q08AD1 1489 aa28.07■■■□□ 2.08
CST3-202ENST00000398409 PLPPR3Q6T4P5 718 aa28.05■■■□□ 2.08
CST3-202ENST00000398409 SETD1BQ9UPS6 1966 aaKnown RBP28.03■■■□□ 2.08
CST3-202ENST00000398409 MYOM3Q5VTT5 1437 aa28.02■■■□□ 2.08
CST3-202ENST00000398409 ADGBQ8N7X0 1667 aa28.02■■■□□ 2.08
CST3-202ENST00000398409 ARHGEF5Q12774 1597 aa28.01■■■□□ 2.07
CST3-202ENST00000398409 LMTK3Q96Q04 1460 aa28.01■■■□□ 2.07
CST3-202ENST00000398409 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
CST3-202ENST00000398409 PLXNC1O60486 1568 aa27.99■■■□□ 2.07
CST3-202ENST00000398409 CEBPAP49715 358 aaPredicted RBP27.96■■■□□ 2.07
CST3-202ENST00000398409 GGT6Q6P531 493 aa27.94■■■□□ 2.06
CST3-202ENST00000398409 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
CST3-202ENST00000398409 PREX1Q8TCU6 1659 aa27.91■■■□□ 2.06
CST3-202ENST00000398409 MROH2AA6NES4 1674 aa27.9■■■□□ 2.06
CST3-202ENST00000398409 ZMYM3Q14202 1370 aa27.89■■■□□ 2.06
CST3-202ENST00000398409 NPATQ14207 1427 aa27.88■■■□□ 2.05
CST3-202ENST00000398409 KIF3BO15066 747 aa27.87■■■□□ 2.05
CST3-202ENST00000398409 C3P01024 1663 aa27.86■■■□□ 2.05
CST3-202ENST00000398409 DMRT2Q9Y5R5 561 aa27.85■■■□□ 2.05
CST3-202ENST00000398409 FAM135AQ9P2D6 1515 aa27.85■■■□□ 2.05
CST3-202ENST00000398409 MAST1Q9Y2H9 1570 aa27.85■■■□□ 2.05
CST3-202ENST00000398409 HSPA2P54652 639 aa27.84■■■□□ 2.05
CST3-202ENST00000398409 FGD6Q6ZV73 1430 aa27.8■■■□□ 2.04
CST3-202ENST00000398409 WASHC2CQ9Y4E1 1318 aa27.78■■■□□ 2.04
CST3-202ENST00000398409 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
CST3-202ENST00000398409 SHANK2Q9UPX8 1470 aa27.77■■■□□ 2.04
CST3-202ENST00000398409 CLTCQ00610 1675 aaKnown RBP27.76■■■□□ 2.03
CST3-202ENST00000398409 TCOF1Q13428 1488 aaKnown RBP27.76■■■□□ 2.03
CST3-202ENST00000398409 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
CST3-202ENST00000398409 ABCC5O15440 1437 aa27.71■■■□□ 2.03
CST3-202ENST00000398409 DUOX2Q9NRD8 1548 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms