RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 SUPT6HQ7KZ85 1726 aaKnown RBP28.08■■■□□ 2.09
TNFSF13-204ENST00000396542 FRMPD1Q5SYB0 1578 aa28.07■■■□□ 2.08
TNFSF13-204ENST00000396542 EFCAB2Q5VUJ9 269 aa28.07■■■□□ 2.08
TNFSF13-204ENST00000396542 GPATCH8Q9UKJ3 1502 aaKnown RBP28.07■■■□□ 2.08
TNFSF13-204ENST00000396542 RICTORQ6R327 1708 aa28.06■■■□□ 2.08
TNFSF13-204ENST00000396542 ADGRL1O94910 1474 aa28.04■■■□□ 2.08
TNFSF13-204ENST00000396542 DENND4BO75064 1496 aaPredicted RBP28.02■■■□□ 2.08
TNFSF13-204ENST00000396542 NCOA2Q15596 1464 aa28.02■■■□□ 2.08
TNFSF13-204ENST00000396542 ITSN2Q9NZM3 1697 aa28.01■■■□□ 2.07
TNFSF13-204ENST00000396542 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
TNFSF13-204ENST00000396542 RAPGEF3O95398 923 aa27.99■■■□□ 2.07
TNFSF13-204ENST00000396542 KANK4Q5T7N3 995 aaPredicted RBP27.99■■■□□ 2.07
TNFSF13-204ENST00000396542 SCAPERQ9BY12 1400 aa27.99■■■□□ 2.07
TNFSF13-204ENST00000396542 ABCC1P33527 1531 aa27.97■■■□□ 2.07
TNFSF13-204ENST00000396542 SAMD9LQ8IVG5 1584 aa27.96■■■□□ 2.07
TNFSF13-204ENST00000396542 POGZQ7Z3K3 1410 aa27.96■■■□□ 2.07
TNFSF13-204ENST00000396542 ZMYM4Q5VZL5 1548 aa27.96■■■□□ 2.07
TNFSF13-204ENST00000396542 APLP2Q06481 763 aa27.95■■■□□ 2.06
TNFSF13-204ENST00000396542 ARHGEF12Q9NZN5 1544 aa27.91■■■□□ 2.06
TNFSF13-204ENST00000396542 CFDP1Q9UEE9 299 aaPredicted RBP27.9■■■□□ 2.06
TNFSF13-204ENST00000396542 KDM5CP41229 1560 aa27.89■■■□□ 2.05
TNFSF13-204ENST00000396542 ZNF518AQ6AHZ1 1483 aa27.89■■■□□ 2.05
TNFSF13-204ENST00000396542 MAGI2Q86UL8 1455 aa27.86■■■□□ 2.05
TNFSF13-204ENST00000396542 PLEKHH2Q8IVE3 1493 aa27.86■■■□□ 2.05
TNFSF13-204ENST00000396542 ARHGEF40Q8TER5 1519 aa27.86■■■□□ 2.05
TNFSF13-204ENST00000396542 SYCP2Q9BX26 1530 aa27.85■■■□□ 2.05
TNFSF13-204ENST00000396542 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
TNFSF13-204ENST00000396542 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
TNFSF13-204ENST00000396542 TRAPPC8Q9Y2L5 1435 aa27.83■■■□□ 2.05
TNFSF13-204ENST00000396542 ZFYVE16Q7Z3T8 1539 aa27.82■■■□□ 2.04
TNFSF13-204ENST00000396542 MYOM3Q5VTT5 1437 aa27.8■■■□□ 2.04
TNFSF13-204ENST00000396542 HECW2Q9P2P5 1572 aa27.79■■■□□ 2.04
TNFSF13-204ENST00000396542 AFAP1Q8N556 730 aa27.79■■■□□ 2.04
TNFSF13-204ENST00000396542 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
TNFSF13-204ENST00000396542 YEATS2Q9ULM3 1422 aa27.77■■■□□ 2.04
TNFSF13-204ENST00000396542 ZNF644Q9H582 1327 aaPredicted RBP27.77■■■□□ 2.04
TNFSF13-204ENST00000396542 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.04
TNFSF13-204ENST00000396542 MIA2Q96PC5 1412 aa27.76■■■□□ 2.04
TNFSF13-204ENST00000396542 MBD5Q9P267 1494 aa27.76■■■□□ 2.03
TNFSF13-204ENST00000396542 HNRNPMP52272 730 aaKnown RBP eCLIP27.74■■■□□ 2.03
TNFSF13-204ENST00000396542 KIDINS220Q9ULH0 1771 aa27.72■■■□□ 2.03
TNFSF13-204ENST00000396542 ABCA6Q8N139 1617 aa27.7■■■□□ 2.02
TNFSF13-204ENST00000396542 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
TNFSF13-204ENST00000396542 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
TNFSF13-204ENST00000396542 SIGLEC1Q9BZZ2 1709 aa27.69■■■□□ 2.02
TNFSF13-204ENST00000396542 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
TNFSF13-204ENST00000396542 ATP10AO60312 1499 aa27.68■■■□□ 2.02
TNFSF13-204ENST00000396542 REREQ9P2R6 1566 aa27.65■■■□□ 2.02
TNFSF13-204ENST00000396542 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
TNFSF13-204ENST00000396542 PTPN23Q9H3S7 1636 aa27.65■■■□□ 2.02
TNFSF13-204ENST00000396542 ATP7AQ04656 1500 aa27.65■■■□□ 2.02
TNFSF13-204ENST00000396542 FGD6Q6ZV73 1430 aa27.65■■■□□ 2.02
TNFSF13-204ENST00000396542 C9orf84Q5VXU9 1444 aa27.64■■■□□ 2.02
TNFSF13-204ENST00000396542 KDM4FA0A1W2PPD8 638 aa27.63■■■□□ 2.01
TNFSF13-204ENST00000396542 SPAG9O60271 1321 aaKnown RBP27.63■■■□□ 2.01
TNFSF13-204ENST00000396542 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
TNFSF13-204ENST00000396542 TCOF1Q13428 1488 aaKnown RBP27.62■■■□□ 2.01
TNFSF13-204ENST00000396542 BCORL1Q5H9F3 1711 aa27.61■■■□□ 2.01
TNFSF13-204ENST00000396542 RTEL1-TNFRSF6BF6WH68 1400 aa27.58■■■□□ 2.01
TNFSF13-204ENST00000396542 MYT1LQ9UL68 1186 aa27.58■■■□□ 2.01
TNFSF13-204ENST00000396542 ADAMTSL3P82987 1691 aa27.57■■■□□ 2
TNFSF13-204ENST00000396542 MAST1Q9Y2H9 1570 aa27.55■■■□□ 2
TNFSF13-204ENST00000396542 ADGBQ8N7X0 1667 aa27.54■■■□□ 2
TNFSF13-204ENST00000396542 AGLP35573 1532 aa27.53■■■□□ 2
TNFSF13-204ENST00000396542 ARID4BQ4LE39 1312 aaPredicted RBP27.53■■■□□ 2
TNFSF13-204ENST00000396542 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
TNFSF13-204ENST00000396542 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
TNFSF13-204ENST00000396542 PLXNC1O60486 1568 aa27.52■■■□□ 2
TNFSF13-204ENST00000396542 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
TNFSF13-204ENST00000396542 A2MP01023 1474 aa27.47■■□□□ 1.99
TNFSF13-204ENST00000396542 SHANK2Q9UPX8 1470 aa27.47■■□□□ 1.99
TNFSF13-204ENST00000396542 TSPY4P0CV99 314 aa27.47■■□□□ 1.99
TNFSF13-204ENST00000396542 TSPY10P0CW01 314 aa27.47■■□□□ 1.99
TNFSF13-204ENST00000396542 MADDQ8WXG6 1647 aa27.47■■□□□ 1.99
TNFSF13-204ENST00000396542 ABCC5O15440 1437 aa27.47■■□□□ 1.99
TNFSF13-204ENST00000396542 DAPK1P53355 1430 aa27.45■■□□□ 1.98
TNFSF13-204ENST00000396542 FER1L4A9Z1Z3 1794 aa27.41■■□□□ 1.98
TNFSF13-204ENST00000396542 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
TNFSF13-204ENST00000396542 RIMS1Q86UR5 1692 aaKnown RBP27.39■■□□□ 1.97
TNFSF13-204ENST00000396542 DHX29Q7Z478 1369 aaKnown RBP27.38■■□□□ 1.97
TNFSF13-204ENST00000396542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.97
TNFSF13-204ENST00000396542 MLECQ14165 292 aa27.36■■□□□ 1.97
TNFSF13-204ENST00000396542 FAM50AQ14320 339 aaKnown RBP27.36■■□□□ 1.97
TNFSF13-204ENST00000396542 PTPRMP28827 1452 aa27.35■■□□□ 1.97
TNFSF13-204ENST00000396542 RRBP1Q9P2E9 1410 aaKnown RBP27.33■■□□□ 1.97
TNFSF13-204ENST00000396542 ADGRL2O95490 1459 aa27.31■■□□□ 1.96
TNFSF13-204ENST00000396542 DUOX2Q9NRD8 1548 aa27.31■■□□□ 1.96
TNFSF13-204ENST00000396542 EIF2AK4Q9P2K8 1649 aaKnown RBP27.3■■□□□ 1.96
TNFSF13-204ENST00000396542 KIF15Q9NS87 1388 aa27.27■■□□□ 1.96
TNFSF13-204ENST00000396542 PTPRKQ15262 1439 aa27.26■■□□□ 1.95
TNFSF13-204ENST00000396542 NCOA1Q15788 1441 aa27.26■■□□□ 1.95
TNFSF13-204ENST00000396542 ANKRD30AQ9BXX3 1397 aa27.25■■□□□ 1.95
TNFSF13-204ENST00000396542 RNF17Q9BXT8 1623 aaKnown RBP27.24■■□□□ 1.95
TNFSF13-204ENST00000396542 MROH2AA6NES4 1674 aa27.24■■□□□ 1.95
TNFSF13-204ENST00000396542 CHIC2Q9UKJ5 165 aa27.23■■□□□ 1.95
TNFSF13-204ENST00000396542 ERBINQ96RT1 1412 aa27.23■■□□□ 1.95
TNFSF13-204ENST00000396542 CNTLNQ9NXG0 1405 aa27.23■■□□□ 1.95
TNFSF13-204ENST00000396542 KIF3BO15066 747 aa27.21■■□□□ 1.95
TNFSF13-204ENST00000396542 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
TNFSF13-204ENST00000396542 CLTCQ00610 1675 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 687.8 ms