RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ABCC5O15440 1437 aa23.1■■□□□ 1.29
SNX6-202ENST00000396526 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
SNX6-202ENST00000396526 GCC2Q8IWJ2 1684 aa23.07■■□□□ 1.28
SNX6-202ENST00000396526 DNMT1P26358 1616 aaKnown RBP23.07■■□□□ 1.28
SNX6-202ENST00000396526 ADCY10Q96PN6 1610 aa23.07■■□□□ 1.28
SNX6-202ENST00000396526 KIF14Q15058 1648 aa23.06■■□□□ 1.28
SNX6-202ENST00000396526 MIER1Q8N108 512 aa23.06■■□□□ 1.28
SNX6-202ENST00000396526 MPHOSPH9Q99550 1183 aa23.05■■□□□ 1.28
SNX6-202ENST00000396526 CAMSAP2Q08AD1 1489 aa23.05■■□□□ 1.28
SNX6-202ENST00000396526 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
SNX6-202ENST00000396526 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
SNX6-202ENST00000396526 ANKRD30AQ9BXX3 1397 aa23.02■■□□□ 1.28
SNX6-202ENST00000396526 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
SNX6-202ENST00000396526 RSPH4AQ5TD94 716 aa22.98■■□□□ 1.27
SNX6-202ENST00000396526 SLC4A1APQ9BWU0 796 aaKnown RBP22.98■■□□□ 1.27
SNX6-202ENST00000396526 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
SNX6-202ENST00000396526 NCOA1Q15788 1441 aa22.95■■□□□ 1.26
SNX6-202ENST00000396526 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
SNX6-202ENST00000396526 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
SNX6-202ENST00000396526 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
SNX6-202ENST00000396526 SHANK2Q9UPX8 1470 aa22.87■■□□□ 1.25
SNX6-202ENST00000396526 KDM6BO15054 1643 aa22.87■■□□□ 1.25
SNX6-202ENST00000396526 C9orf84Q5VXU9 1444 aa22.86■■□□□ 1.25
SNX6-202ENST00000396526 HNRNPMP52272 730 aaKnown RBP eCLIP22.86■■□□□ 1.25
SNX6-202ENST00000396526 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
SNX6-202ENST00000396526 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
SNX6-202ENST00000396526 KCNH8Q96L42 1107 aa22.85■■□□□ 1.25
SNX6-202ENST00000396526 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
SNX6-202ENST00000396526 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
SNX6-202ENST00000396526 FOXD1Q16676 465 aa22.82■■□□□ 1.24
SNX6-202ENST00000396526 ANKRD30BQ9BXX2 1392 aa22.81■■□□□ 1.24
SNX6-202ENST00000396526 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
SNX6-202ENST00000396526 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
SNX6-202ENST00000396526 DDX10Q13206 875 aaKnown RBP22.8■■□□□ 1.24
SNX6-202ENST00000396526 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
SNX6-202ENST00000396526 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
SNX6-202ENST00000396526 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
SNX6-202ENST00000396526 CROCC2H7BZ55 1655 aa22.78■■□□□ 1.24
SNX6-202ENST00000396526 DENND4BO75064 1496 aaPredicted RBP22.78■■□□□ 1.24
SNX6-202ENST00000396526 EFCAB2Q5VUJ9 269 aa22.78■■□□□ 1.24
SNX6-202ENST00000396526 L3MBTL2Q969R5 705 aa22.78■■□□□ 1.24
SNX6-202ENST00000396526 ARHGAP5Q13017 1502 aa22.78■■□□□ 1.24
SNX6-202ENST00000396526 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
SNX6-202ENST00000396526 NUP155O75694 1391 aa22.76■■□□□ 1.23
SNX6-202ENST00000396526 PKD2Q13563 968 aa22.75■■□□□ 1.23
SNX6-202ENST00000396526 RPRD2Q5VT52 1461 aaKnown RBP22.74■■□□□ 1.23
SNX6-202ENST00000396526 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
SNX6-202ENST00000396526 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNX6-202ENST00000396526 KIAA1107Q9UPP5 1409 aa22.73■■□□□ 1.23
SNX6-202ENST00000396526 MBD5Q9P267 1494 aa22.73■■□□□ 1.23
SNX6-202ENST00000396526 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
SNX6-202ENST00000396526 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
SNX6-202ENST00000396526 PZPP20742 1482 aa22.71■■□□□ 1.23
SNX6-202ENST00000396526 OSCARQ8IYS5 282 aa22.71■■□□□ 1.23
SNX6-202ENST00000396526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.71■■□□□ 1.23
SNX6-202ENST00000396526 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
SNX6-202ENST00000396526 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
SNX6-202ENST00000396526 ANP32CO43423 234 aa22.68■■□□□ 1.22
SNX6-202ENST00000396526 PLCH2O75038 1416 aa22.68■■□□□ 1.22
SNX6-202ENST00000396526 CDC42BPBQ9Y5S2 1711 aa22.67■■□□□ 1.22
SNX6-202ENST00000396526 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
SNX6-202ENST00000396526 TTC37Q6PGP7 1564 aa22.65■■□□□ 1.22
SNX6-202ENST00000396526 ZCCHC11Q5TAX3 1644 aaKnown RBP22.65■■□□□ 1.22
SNX6-202ENST00000396526 MYO5CQ9NQX4 1742 aa22.64■■□□□ 1.22
SNX6-202ENST00000396526 SYCP2Q9BX26 1530 aa22.63■■□□□ 1.21
SNX6-202ENST00000396526 HSPA5P11021 654 aaKnown RBP22.63■■□□□ 1.21
SNX6-202ENST00000396526 GTF3C3Q9Y5Q9 886 aa22.59■■□□□ 1.21
SNX6-202ENST00000396526 KDM5DQ9BY66 1539 aa22.57■■□□□ 1.2
SNX6-202ENST00000396526 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
SNX6-202ENST00000396526 TEX14Q8IWB6 1497 aa22.56■■□□□ 1.2
SNX6-202ENST00000396526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.55■■□□□ 1.25e-7■■□□□ 12.3
SNX6-202ENST00000396526 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
SNX6-202ENST00000396526 CCER2I3L3R5 266 aa22.54■■□□□ 1.2
SNX6-202ENST00000396526 SPAG9O60271 1321 aaKnown RBP22.53■■□□□ 1.2
SNX6-202ENST00000396526 NBPF8Q3BBV2 869 aa22.53■■□□□ 1.2
SNX6-202ENST00000396526 ZNF326Q5BKZ1 582 aaKnown RBP22.53■■□□□ 1.2
SNX6-202ENST00000396526 ARAP3Q8WWN8 1544 aa22.52■■□□□ 1.2
SNX6-202ENST00000396526 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
SNX6-202ENST00000396526 DUOX2Q9NRD8 1548 aa22.5■■□□□ 1.19
SNX6-202ENST00000396526 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
SNX6-202ENST00000396526 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
SNX6-202ENST00000396526 FAM135AQ9P2D6 1515 aa22.47■■□□□ 1.19
SNX6-202ENST00000396526 ABCC1P33527 1531 aa22.46■■□□□ 1.19
SNX6-202ENST00000396526 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
SNX6-202ENST00000396526 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.18
SNX6-202ENST00000396526 ARHGEF12Q9NZN5 1544 aa22.45■■□□□ 1.18
SNX6-202ENST00000396526 WASHC2AQ641Q2 1341 aa22.44■■□□□ 1.18
SNX6-202ENST00000396526 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
SNX6-202ENST00000396526 TRAPPC8Q9Y2L5 1435 aa22.43■■□□□ 1.18
SNX6-202ENST00000396526 AFAP1Q8N556 730 aa22.43■■□□□ 1.18
SNX6-202ENST00000396526 FANCAO15360 1455 aa22.42■■□□□ 1.18
SNX6-202ENST00000396526 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
SNX6-202ENST00000396526 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
SNX6-202ENST00000396526 CCDC7Q96M83 1385 aa22.39■■□□□ 1.18
SNX6-202ENST00000396526 UNC13BO14795 1591 aa22.38■■□□□ 1.17
SNX6-202ENST00000396526 UHRF1BP1Q6BDS2 1440 aa22.38■■□□□ 1.17
SNX6-202ENST00000396526 CARD11Q9BXL7 1154 aa22.38■■□□□ 1.17
SNX6-202ENST00000396526 KANK1Q14678 1352 aa22.36■■□□□ 1.17
SNX6-202ENST00000396526 USP47Q96K76 1375 aa22.36■■□□□ 1.17
SNX6-202ENST00000396526 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms